Xmipp  v3.23.11-Nereus
python_constants.cpp
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1 /***************************************************************************
2  *
3  * Authors: J.M. De la Rosa Trevin (jmdelarosa@cnb.csic.es)
4  *
5  * Unidad de Bioinformatica of Centro Nacional de Biotecnologia , CSIC
6  *
7  * This program is free software; you can redistribute it and/or modify
8  * it under the terms of the GNU General Public License as published by
9  * the Free Software Foundation; either version 2 of the License, or
10  * (at your option) any later version.
11  *
12  * This program is distributed in the hope that it will be useful,
13  * but WITHOUT ANY WARRANTY; without even the implied warranty of
14  * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
15  * GNU General Public License for more details.
16  *
17  * You should have received a copy of the GNU General Public License
18  * along with this program; if not, write to the Free Software
19  * Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA
20  * 02111-1307 USA
21  *
22  * All comments concerning this program package may be sent to the
23  * e-mail address 'xmipp@cnb.csic.es'
24  ***************************************************************************/
25 #include "xmippmodule.h"
26 #include "core/transformations_defines.h"
27 #include "core/metadata_sql.h"
28 #include "core/metadata_writemode.h"
29 #include "core/xmipp_datatype.h"
30 #include "core/xmipp_color.h"
31 #include "core/xmipp_image_base.h"
32 #include "core/axis_view.h"
33 #include "core/xmipp_random_mode.h"
34 #include "core/xmipp_macros.h"
35 
36 /***************************************************************/
37 /* MDLabels constants */
38 /**************************************************************/
39 
40 void addIntConstant(PyObject * dict, const char * name, const long &value)
41 {
42  PyObject * pyValue = PyLong_FromLong(value);
43  PyDict_SetItemString(dict, name, pyValue);
44  Py_DECREF(pyValue);
45 }
46 
47 //Macro to add constants to xmipp module with the same name
48 #define ADD_CONST(label) addIntConstant(dict, #label, (long)label)
49 // and with different name
50 #define ADD_CONST2(name, label) addIntConstant(dict, name, (long)label)
51 
52 void addLabels(PyObject * dict)
53 {
54 
55  //Add constants
56  ADD_CONST(xmipp_transformation::NEAREST);
57  ADD_CONST(xmipp_transformation::LINEAR);
58  ADD_CONST(xmipp_transformation::BSPLINE2);
59  ADD_CONST(xmipp_transformation::BSPLINE3);
60  ADD_CONST(xmipp_transformation::BSPLINE4);
61 
62 
63  ADD_CONST(AGGR_COUNT);
64  ADD_CONST(AGGR_MAX);
65  ADD_CONST(AGGR_SUM);
66  ADD_CONST(AGGR_AVG);
67  ADD_CONST(AGGR_MIN);
68 
69  ADD_CONST(UNION);
70  ADD_CONST(UNION_DISTINCT);
71  ADD_CONST(INTERSECTION);
72  ADD_CONST(SUBSTRACTION);
73  ADD_CONST(INNER_JOIN);
74  ADD_CONST(LEFT_JOIN);
75  ADD_CONST(NATURAL_JOIN);
76  ADD_CONST(OUTER_JOIN);
77  ADD_CONST(INNER);
78  ADD_CONST(LEFT);
79  ADD_CONST(OUTER);
80  ADD_CONST(NATURAL);
81  ADD_CONST(EQ);
82  ADD_CONST(NE);
83  ADD_CONST(GT);
84  ADD_CONST(LT);
85  ADD_CONST(GE);
86  ADD_CONST(LE);
87  ADD_CONST(MD_OVERWRITE);
88  ADD_CONST(MD_APPEND);
89  ADD_CONST(MDL_UNDEFINED);
90  ADD_CONST(MDL_FIRST_LABEL);
91 
92  //Metadata Labels
93  ADD_CONST(MDL_OBJID);
94  ADD_CONST(MDL_ANGLE_PSI2);
95  ADD_CONST(MDL_ANGLE_PSI);
96  ADD_CONST(MDL_ANGLE_PSI_DIFF);
97  ADD_CONST(MDL_ANGLE_ROT2);
98  ADD_CONST(MDL_ANGLE_ROT);
99  ADD_CONST(MDL_ANGLE_ROT_DIFF);
100  ADD_CONST(MDL_ANGLE_TILT2);
101  ADD_CONST(MDL_ANGLE_TILT);
102  ADD_CONST(MDL_ANGLE_TILT_DIFF);
103  ADD_CONST(MDL_ANGLE_DIFF0);
104  ADD_CONST(MDL_ANGLE_DIFF);
105  ADD_CONST(MDL_ANGLE_DIFF2);
106  ADD_CONST(MDL_ANGLE_Y);
107  ADD_CONST(MDL_ANGLE_Y2);
108  ADD_CONST(MDL_ANGLE_TEMPERATURE);
109  ADD_CONST(MDL_ASSIGNED_DIR_REF_CC);
110  ADD_CONST(MDL_AVG);
111  ADD_CONST(MDL_AVG_CHANGES_ORIENTATIONS);
112  ADD_CONST(MDL_AVG_CHANGES_OFFSETS);
113  ADD_CONST(MDL_AVG_CHANGES_CLASSES);
114 
115  ADD_CONST(MDL_BGMEAN);
116  ADD_CONST(MDL_BFACTOR);
117  ADD_CONST(MDL_BLOCK_NUMBER);
118 
119  ADD_CONST(MDL_CLASS_COUNT);
120  ADD_CONST(MDL_CLASS_PERCENTAGE);
121  ADD_CONST(MDL_CLASSIFICATION_DATA);
122  ADD_CONST(MDL_CLASSIFICATION_DATA_SIZE);
123  ADD_CONST(MDL_CLASSIFICATION_DPR_05);
124  ADD_CONST(MDL_CLASSIFICATION_FRC_05);
125  ADD_CONST(MDL_CLASSIFICATION_INTRACLASS_DISTANCE);
126 
127  ADD_CONST(MDL_COLOR);
128  ADD_CONST(MDL_COMMENT);
129  ADD_CONST(MDL_COST);
130  ADD_CONST(MDL_COST_PERCENTILE);
131  ADD_CONST(MDL_COUNT);
132  ADD_CONST(MDL_COUNT2);
133  ADD_CONST(MDL_CONTINUOUS_GRAY_A);
134  ADD_CONST(MDL_CONTINUOUS_GRAY_B);
135  ADD_CONST(MDL_CONTINUOUS_X);
136  ADD_CONST(MDL_CONTINUOUS_Y);
137  ADD_CONST(MDL_CONTINUOUS_SCALE_X);
138  ADD_CONST(MDL_CONTINUOUS_SCALE_Y);
139  ADD_CONST(MDL_CONTINUOUS_FLIP);
140  ADD_CONST(MDL_CORR_DENOISED_PROJECTION);
141  ADD_CONST(MDL_CORR_DENOISED_NOISY);
142 
143  ADD_CONST(MDL_CLASS_INTERSECTION_SIZE_PVALUE);
144  ADD_CONST(MDL_CLASS_INTERSECTION_RELATIVE_SIZE_PVALUE);
145 
146  ADD_CONST(MDL_CORRELATION_IDX);
147  ADD_CONST(MDL_CORRELATION_MASK);
148  ADD_CONST(MDL_CORRELATION_WEIGHT);
149 
150  ADD_CONST(MDL_CTF_INPUTPARAMS);
151  ADD_CONST(MDL_CTF_MODEL);
152  ADD_CONST(MDL_CTF_MODEL2);
153  ADD_CONST(MDL_CTF_SAMPLING_RATE);
154  ADD_CONST(MDL_CTF_VOLTAGE);
155  ADD_CONST(MDL_CTF_DEFOCUSU);
156  ADD_CONST(MDL_CTF_DEFOCUSV);
157  ADD_CONST(MDL_CTF_DEFOCUSA);
158  ADD_CONST(MDL_CTF_DEFOCUS_ANGLE);
159  ADD_CONST(MDL_CTF_DEFOCUS_CHANGE);
160  ADD_CONST(MDL_CTF_DEFOCUS_R2);
161  ADD_CONST(MDL_CTF_DEFOCUS_RESIDUAL);
162  ADD_CONST(MDL_CTF_DEFOCUS_COEFS);
163  ADD_CONST(MDL_CTF_DOWNSAMPLE_PERFORMED);
164  ADD_CONST(MDL_CTF_CS);
165  ADD_CONST(MDL_CTF_CA);
166  ADD_CONST(MDL_CTF_GROUP);
167  ADD_CONST(MDL_CTF_ENERGY_LOSS);
168  ADD_CONST(MDL_CTF_LENS_STABILITY);
169  ADD_CONST(MDL_CTF_CONVERGENCE_CONE);
170  ADD_CONST(MDL_CTF_LONGITUDINAL_DISPLACEMENT);
171  ADD_CONST(MDL_CTF_TRANSVERSAL_DISPLACEMENT);
172  ADD_CONST(MDL_CTF_Q0);
173  ADD_CONST(MDL_CTF_K);
174  ADD_CONST(MDL_CTF_BG_GAUSSIAN_K);
175  ADD_CONST(MDL_CTF_BG_GAUSSIAN_SIGMAU);
176  ADD_CONST(MDL_CTF_BG_GAUSSIAN_SIGMAV);
177  ADD_CONST(MDL_CTF_BG_GAUSSIAN_CU);
178  ADD_CONST(MDL_CTF_BG_GAUSSIAN_CV);
179  ADD_CONST(MDL_CTF_BG_GAUSSIAN_ANGLE);
180  ADD_CONST(MDL_CTF_BG_SQRT_K);
181  ADD_CONST(MDL_CTF_BG_SQRT_U);
182  ADD_CONST(MDL_CTF_BG_SQRT_V);
183  ADD_CONST(MDL_CTF_BG_SQRT_ANGLE);
184  ADD_CONST(MDL_CTF_BG_BASELINE);
185  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_K);
186  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_SIGMAU);
187  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_SIGMAV);
188  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_CU);
189  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_CV);
190  ADD_CONST(MDL_CTF_BG_GAUSSIAN2_ANGLE);
191  ADD_CONST(MDL_CTF_CRIT_PSDCORRELATION90);
192  ADD_CONST(MDL_CTF_CRIT_FIRSTZERORATIO);
193  ADD_CONST(MDL_CTF_CRIT_FIRSTZEROAVG);
194  ADD_CONST(MDL_CTF_CRIT_FIRSTZERODISAGREEMENT);
195  ADD_CONST(MDL_CTF_CRIT_NORMALITY);
196  ADD_CONST(MDL_CTF_CRIT_DAMPING);
197  ADD_CONST(MDL_CTF_CRIT_PSDRADIALINTEGRAL);
198  ADD_CONST(MDL_CTF_CRIT_FITTINGSCORE);
199  ADD_CONST(MDL_CTF_CRIT_FITTINGCORR13);
200  ADD_CONST(MDL_CTF_CRIT_ICENESS);
201  ADD_CONST(MDL_CTF_CRIT_PSDVARIANCE);
202  ADD_CONST(MDL_CTF_CRIT_PSDPCA1VARIANCE);
203  ADD_CONST(MDL_CTF_CRIT_PSDPCARUNSTEST);
204  ADD_CONST(MDL_CTF_CRIT_NONASTIGMATICVALIDITY);
205  ADD_CONST(MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_DIFF_RATIO);
206  ADD_CONST(MDL_CTF_CRIT_MAXFREQ);
207  ADD_CONST(MDL_CTF_PHASE_SHIFT);
208  ADD_CONST(MDL_CTF_VPP_RADIUS);
209  ADD_CONST(MDL_COORD_CONSENSUS_SCORE);
210  ADD_CONST(MDL_CRYSTAL_LATTICE_A);
211  ADD_CONST(MDL_CRYSTAL_LATTICE_B);
212  ADD_CONST(MDL_CRYSTAL_DISAPPEAR_THRE);
213  ADD_CONST(MDL_CRYSTAL_SHFILE);
214  ADD_CONST(MDL_CRYSTAL_ORTHO_PRJ);
215  ADD_CONST(MDL_CRYSTAL_PROJ);
216  ADD_CONST(MDL_CRYSTAL_CELLX);
217  ADD_CONST(MDL_CRYSTAL_CELLY);
218  ADD_CONST(MDL_CRYSTAL_SHIFTX);
219  ADD_CONST(MDL_CRYSTAL_SHIFTY);
220  ADD_CONST(MDL_CRYSTAL_SHIFTZ);
221  ADD_CONST(MDL_CUMULATIVE_SSNR);
222 
223  ADD_CONST(MDL_DATATYPE);
224  ADD_CONST(MDL_DATE);
225  ADD_CONST(MDL_DEFGROUP);
226  ADD_CONST(MDL_DIMRED);
227  ADD_CONST(MDL_DIMENSIONS_3D);
228  ADD_CONST(MDL_DIMENSIONS_2D);
229  ADD_CONST(MDL_DM3_IDTAG);
230  ADD_CONST(MDL_DM3_NODEID);
231  ADD_CONST(MDL_DM3_NUMBER_TYPE);
232  ADD_CONST(MDL_DM3_PARENTID);
233  ADD_CONST(MDL_DM3_TAGCLASS);
234  ADD_CONST(MDL_DM3_TAGNAME);
235  ADD_CONST(MDL_DM3_SIZE);
236  ADD_CONST(MDL_DM3_VALUE);
237  ADD_CONST(MDL_DOSE);
238 
239  ADD_CONST(MDL_ENABLED);
240 
241  ADD_CONST(MDL_FLIP);
242  ADD_CONST(MDL_FOM);
243  ADD_CONST(MDL_FRAME_ID);
244 
245  ADD_CONST(MDL_GATHER_ID);
246 
247  ADD_CONST(MDL_GRAPH_DISTANCE2MAX);
248  ADD_CONST(MDL_GRAPH_DISTANCE2MAX_PREVIOUS);
249  ADD_CONST(MDL_GRAPH_CC);
250  ADD_CONST(MDL_GRAPH_CC_PREVIOUS);
251 
252  ADD_CONST(MDL_HALF1);
253  ADD_CONST(MDL_HALF2);
254 
255  ADD_CONST(MDL_IDX);
256  ADD_CONST(MDL_IMAGE);
257  ADD_CONST(MDL_IMAGE_COVARIANCE);
258  ADD_CONST(MDL_IMAGE_IDX);
259  ADD_CONST(MDL_IMAGE_ORIGINAL);
260  ADD_CONST(MDL_IMAGE_REF);
261  ADD_CONST(MDL_IMAGE_RESIDUAL);
262  ADD_CONST(MDL_IMAGE_TILTED);
263  ADD_CONST(MDL_IMGMD);
264  ADD_CONST(MDL_IMAGE1);
265  ADD_CONST(MDL_IMAGE2);
266  ADD_CONST(MDL_IMAGE3);
267  ADD_CONST(MDL_IMAGE4);
268  ADD_CONST(MDL_IMAGE5);
269 
270  ADD_CONST(MDL_IMED);
271 
272  ADD_CONST(MDL_INTSCALE);
273  ADD_CONST(MDL_ITEM_ID);
274  ADD_CONST(MDL_ITER);
275  ADD_CONST(MDL_KSTEST);
276  ADD_CONST(MDL_LL);
277  ADD_CONST(MDL_LOCAL_AVERAGE);
278  ADD_CONST(MDL_MACRO_CMD);
279  ADD_CONST(MDL_MACRO_CMD_ARGS);
280  ADD_CONST(MDL_MAGNIFICATION);
281  ADD_CONST(MDL_MASK);
282  ADD_CONST(MDL_MAXCC);
283  ADD_CONST(MDL_MAXCC_PERCENTILE);
284  ADD_CONST(MDL_MAX);
285  ADD_CONST(MDL_MAXCC_PREVIOUS);
286  ADD_CONST(MDL_MICROGRAPH);
287  ADD_CONST(MDL_MICROGRAPH_ID);
288  ADD_CONST(MDL_MICROGRAPH_MOVIE);
289  ADD_CONST(MDL_MICROGRAPH_MOVIE_ID);
290  ADD_CONST(MDL_MICROGRAPH_PARTICLES);
291  ADD_CONST(MDL_MICROGRAPH_ORIGINAL);
292  ADD_CONST(MDL_MICROGRAPH_TILTED);
293  ADD_CONST(MDL_MICROGRAPH_TILTED_ORIGINAL);
294  ADD_CONST(MDL_MIN);
295  ADD_CONST(MDL_MIRRORFRAC);
296  ADD_CONST(MDL_MISSINGREGION_NR);
297  ADD_CONST(MDL_MISSINGREGION_TYPE);
298  ADD_CONST(MDL_MISSINGREGION_THY0);
299  ADD_CONST(MDL_MISSINGREGION_THYF);
300  ADD_CONST(MDL_MISSINGREGION_THX0);
301  ADD_CONST(MDL_MISSINGREGION_THXF);
302  ADD_CONST(MDL_MLF_CTF);
303  ADD_CONST(MDL_MLF_WIENER);
304  ADD_CONST(MDL_MLF_SIGNAL);
305  ADD_CONST(MDL_MLF_NOISE);
306  ADD_CONST(MDL_MODELFRAC);
307 
308  ADD_CONST(MDL_NEIGHBORS);
309  ADD_CONST(MDL_NEIGHBOR);
310  ADD_CONST(MDL_NEIGHBORHOOD_RADIUS);
311  ADD_CONST(MDL_NMA);
312  ADD_CONST(MDL_NMA_MODEFILE);
313  ADD_CONST(MDL_NMA_COLLECTIVITY);
314  ADD_CONST(MDL_NMA_MINRANGE);
315  ADD_CONST(MDL_NMA_MAXRANGE);
316  ADD_CONST(MDL_NMA_SCORE);
317  ADD_CONST(MDL_NMA_ATOMSHIFT);
318  ADD_CONST(MDL_NMA_EIGENVAL);
319  ADD_CONST(MDL_NOISE_ANGLES);
320  ADD_CONST(MDL_NOISE_PARTICLE_COORD);
321  ADD_CONST(MDL_NOISE_COORD);
322  ADD_CONST(MDL_NOISE_PIXEL_LEVEL);
323 
324  ADD_CONST(MDL_OPTICALFLOW_MEANX);
325  ADD_CONST(MDL_OPTICALFLOW_MEANY);
326  ADD_CONST(MDL_OPTICALFLOW_STDX);
327  ADD_CONST(MDL_OPTICALFLOW_STDY);
328 
329  ADD_CONST(MDL_ORDER);
330  ADD_CONST(MDL_ORIGIN_X);
331  ADD_CONST(MDL_ORIGIN_Y);
332  ADD_CONST(MDL_ORIGIN_Z);
333 
334  ADD_CONST(MDL_PARTICLE_ID);
335  ADD_CONST(MDL_PICKING_AUTOPICKPERCENT);
336  ADD_CONST(MDL_PICKING_PARTICLE_SIZE);
337  ADD_CONST(MDL_PICKING_STATE);
338  ADD_CONST(MDL_PICKING_MICROGRAPH_STATE);
339  ADD_CONST(MDL_PICKING_TEMPLATES);
340  ADD_CONST(MDL_PICKING_MANUALPARTICLES_SIZE);
341  ADD_CONST(MDL_PICKING_AUTOPARTICLES_SIZE);
342  ADD_CONST(MDL_PMAX);
343  ADD_CONST(MDL_AVGPMAX);
344  ADD_CONST(MDL_PROGRAM);
345  ADD_CONST(MDL_PRJ_DIMENSIONS);
346  ADD_CONST(MDL_PRJ_ANGFILE);
347  ADD_CONST(MDL_PRJ_PSI_NOISE);
348  ADD_CONST(MDL_PRJ_PSI_RANDSTR);
349  ADD_CONST(MDL_PRJ_PSI_RANGE);
350  ADD_CONST(MDL_PRJ_ROT_NOISE);
351  ADD_CONST(MDL_PRJ_ROT_RANDSTR);
352  ADD_CONST(MDL_PRJ_ROT_RANGE);
353  ADD_CONST(MDL_PRJ_TILT_NOISE);
354  ADD_CONST(MDL_PRJ_TILT_RANDSTR);
355  ADD_CONST(MDL_PRJ_TILT_RANGE);
356  ADD_CONST(MDL_PRJ_VOL);
357  ADD_CONST(MDL_PSD);
358  ADD_CONST(MDL_PSD_ENHANCED);
359 
360  ADD_CONST(MDL_RANDOMSEED);
361  ADD_CONST(MDL_REF3D);
362  ADD_CONST(MDL_REF);
363  ADD_CONST(MDL_REF2);
364  ADD_CONST(MDL_REFMD);
365  ADD_CONST(MDL_RESIDUE);
366  ADD_CONST(MDL_RESOLUTION_ANISOTROPY);
367  ADD_CONST(MDL_RESOLUTION_DPR);
368  ADD_CONST(MDL_RESOLUTION_ERRORL2);
369  ADD_CONST(MDL_RESOLUTION_FRC);
370  ADD_CONST(MDL_RESOLUTION_FRCRANDOMNOISE);
371  ADD_CONST(MDL_RESOLUTION_FREQ);
372  ADD_CONST(MDL_RESOLUTION_FREQ2);
373  ADD_CONST(MDL_RESOLUTION_FREQREAL);
374  ADD_CONST(MDL_RESOLUTION_FSO);
375  ADD_CONST(MDL_RESOLUTION_LOG_STRUCTURE_FACTOR);
376  ADD_CONST(MDL_RESOLUTION_SSNR);
377  ADD_CONST(MDL_RESOLUTION_STRUCTURE_FACTOR);
378  ADD_CONST(MDL_RESOLUTION_RFACTOR);
379  ADD_CONST(MDL_RESOLUTION_LOCAL_RESIDUE);
380 
381  ADD_CONST(MDL_SAMPLINGRATE);
382  ADD_CONST(MDL_SAMPLINGRATE_ORIGINAL);
383  ADD_CONST(MDL_SAMPLINGRATE_X);
384  ADD_CONST(MDL_SAMPLINGRATE_Y);
385  ADD_CONST(MDL_SAMPLINGRATE_Z);
386  ADD_CONST(MDL_SCALE);
387  ADD_CONST(MDL_SELFILE);
388  ADD_CONST(MDL_SERIE);
389  ADD_CONST(MDL_SHIFT_X);
390  ADD_CONST(MDL_SHIFT_Y);
391  ADD_CONST(MDL_SHIFT_Z);
392  ADD_CONST(MDL_SHIFT_X2);
393  ADD_CONST(MDL_SHIFT_Y2);
394  ADD_CONST(MDL_SHIFT_X_DIFF);
395  ADD_CONST(MDL_SHIFT_Y_DIFF);
396  ADD_CONST(MDL_SHIFT_DIFF0);
397  ADD_CONST(MDL_SHIFT_DIFF);
398  ADD_CONST(MDL_SHIFT_DIFF2);
399  ADD_CONST(MDL_SIGMANOISE);
400  ADD_CONST(MDL_SIGMAOFFSET);
401  ADD_CONST(MDL_SIGNALCHANGE);
402  ADD_CONST(MDL_STAR_COMMENT);
403  ADD_CONST(MDL_STDDEV);
404  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY);
405  ADD_CONST(MDL_SCORE_BY_MIRROR);
406  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_PRECISION_EXP);
407  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_PRECISION_REF);
408  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_PRECISION);
409  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_ACCURACY);
410  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_ACCURACY_EXP);
411  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_ACCURACY_REF);
412  ADD_CONST(MDL_SCORE_BY_ALIGNABILITY_NOISE);
413  ADD_CONST(MDL_SCORE_BY_EMPTINESS);
414  ADD_CONST(MDL_SCORE_BY_ENTROPY);
415  ADD_CONST(MDL_SCORE_BY_GRANULO);
416  ADD_CONST(MDL_SCORE_BY_GINI);
417  ADD_CONST(MDL_SCORE_BY_HISTDIST);
418  ADD_CONST(MDL_SCORE_BY_LBP);
419  ADD_CONST(MDL_SCORE_BY_PCA_RESIDUAL_PROJ);
420  ADD_CONST(MDL_SCORE_BY_PCA_RESIDUAL_EXP);
421  ADD_CONST(MDL_SCORE_BY_PCA_RESIDUAL);
422  ADD_CONST(MDL_SCORE_BY_SCREENING);
423  ADD_CONST(MDL_SCORE_BY_VARIANCE);
424  ADD_CONST(MDL_SCORE_BY_VAR);
425  ADD_CONST(MDL_SCORE_BY_ZERNIKE);
426  ADD_CONST(MDL_SCORE_BY_ZSCORE);
427  ADD_CONST(MDL_SPH_COEFFICIENTS);
428  ADD_CONST(MDL_SPH_DEFORMATION);
429  ADD_CONST(MDL_SPH_TSNE_COEFF1D);
430  ADD_CONST(MDL_SPH_TSNE_COEFF2D);
431 
432  ADD_CONST(MDL_SUBTRACTION_R2);
433  ADD_CONST(MDL_SUBTRACTION_BETA0);
434  ADD_CONST(MDL_SUBTRACTION_BETA1);
435 
436 
437  ADD_CONST(MDL_SUM);
438  ADD_CONST(MDL_SUMWEIGHT);
439  ADD_CONST(MDL_SYMNO);
440 
441  ADD_CONST(MDL_TIME);
442 
443  ADD_CONST(MDL_TRANSFORM_MATRIX);
444  ADD_CONST(MDL_TSID);
445  ADD_CONST(MDL_TOMOGRAM_VOLUME);
446  ADD_CONST(MDL_TOMOGRAMMD);
447 
448  ADD_CONST(MDL_USER);
449 
450  ADD_CONST(MDL_VOLUME_SCORE_SUM);
451  ADD_CONST(MDL_VOLUME_SCORE_SUM_TH);
452  ADD_CONST(MDL_VOLUME_SCORE_MEAN);
453  ADD_CONST(MDL_VOLUME_SCORE_MIN);
454  ADD_CONST(MDL_VOLUME_SCORE1);
455  ADD_CONST(MDL_VOLUME_SCORE2);
456  ADD_CONST(MDL_VOLUME_SCORE3);
457  ADD_CONST(MDL_VOLUME_SCORE4);
458 
459  ADD_CONST(MDL_WEIGHT);
460  ADD_CONST(MDL_WEIGHT_P);
461  ADD_CONST(MDL_WEIGHT_CONTINUOUS2);
462  ADD_CONST(MDL_WEIGHT_JUMPER0);
463  ADD_CONST(MDL_WEIGHT_JUMPER);
464  ADD_CONST(MDL_WEIGHT_JUMPER2);
465  ADD_CONST(MDL_WEIGHT_REALCORR);
466  ADD_CONST(MDL_WEIGHT_PHASECORR);
467  ADD_CONST(MDL_WEIGHT_PRECISION_ALIGNABILITY);
468  ADD_CONST(MDL_WEIGHT_ACCURACY_ALIGNABILITY);
469  ADD_CONST(MDL_WEIGHT_ALIGNABILITY);
470  ADD_CONST(MDL_WEIGHT_PRECISION_MIRROR);
471  ADD_CONST(MDL_WEIGHT_SIGNIFICANT);
472  ADD_CONST(MDL_WEIGHT_SSNR);
473  ADD_CONST(MDL_WROBUST);
474 
475  ADD_CONST(MDL_XCOOR);
476  ADD_CONST(MDL_XCOOR_TILT);
477  ADD_CONST(MDL_XSIZE);
478  ADD_CONST(MDL_X);
479 
480  ADD_CONST(MDL_YCOOR);
481  ADD_CONST(MDL_YCOOR_TILT);
482  ADD_CONST(MDL_Y);
483  ADD_CONST(MDL_YSIZE);
484  ADD_CONST(MDL_ZCOOR);
485  ADD_CONST(MDL_Z);
486  ADD_CONST(MDL_ZSCORE);
487  ADD_CONST(MDL_ZSCORE_DEEPLEARNING1);
488  ADD_CONST(MDL_GOOD_REGION_SCORE);
489  ADD_CONST(MDL_ZSCORE_HISTOGRAM);
490  ADD_CONST(MDL_ZSCORE_RESMEAN);
491  ADD_CONST(MDL_ZSCORE_RESVAR);
492  ADD_CONST(MDL_ZSCORE_RESCOV);
493  ADD_CONST(MDL_ZSCORE_SHAPE1);
494  ADD_CONST(MDL_ZSCORE_SHAPE2);
495  ADD_CONST(MDL_ZSCORE_SNR1);
496  ADD_CONST(MDL_ZSCORE_SNR2);
497  ADD_CONST(MDL_ZSIZE);
498  ADD_CONST(MDL_ZSIZE);
499  ADD_CONST(MDL_LAST_LABEL);
500 
501  /* Label types */
502  ADD_CONST(LABEL_NOTYPE);
503  ADD_CONST(LABEL_INT);
504  ADD_CONST(LABEL_BOOL);
505  ADD_CONST(LABEL_DOUBLE);
506  ADD_CONST(LABEL_VECTOR_DOUBLE);
507  ADD_CONST(LABEL_STRING);
508  ADD_CONST(LABEL_SIZET);
509  ADD_CONST(LABEL_VECTOR_SIZET);
510  ADD_CONST(TAGLABEL_NOTAG);
511  ADD_CONST(TAGLABEL_TEXTFILE);
512  ADD_CONST(TAGLABEL_METADATA);
513  ADD_CONST(TAGLABEL_CTFPARAM);
514  ADD_CONST(TAGLABEL_IMAGE);
515  ADD_CONST(TAGLABEL_VOLUME);
516  ADD_CONST(TAGLABEL_STACK);
517  ADD_CONST(TAGLABEL_MICROGRAPH);
518  ADD_CONST(TAGLABEL_PSD);
519  ADD_CONST(_NONE);
520  ADD_CONST(HEADER);
521  ADD_CONST2("HEADER_ALL", _HEADER_ALL);
522  ADD_CONST(DATA);
523  ADD_CONST2("DATA_ALL", _DATA_ALL);
524  ADD_CONST(xmipp_transformation::WRAP);
525  ADD_CONST(ALL_IMAGES);
526  ADD_CONST(FILENAMENUMBERLENGTH);
527  ADD_CONST2("XMIPP_BLACK", BLACK);
528  ADD_CONST2("XMIPP_RED", RED);
529  ADD_CONST2("XMIPP_GREEN", GREEN);
530  ADD_CONST2("XMIPP_YELLOW", YELLOW);
531  ADD_CONST2("XMIPP_BLUE", BLUE);
532  ADD_CONST2("XMIPP_MAGENTA", MAGENTA);
533  ADD_CONST2("XMIPP_CYAN", CYAN);
534  ADD_CONST2("XMIPP_WHITE", WHITE);
535  ADD_CONST2("XMIPP_RND_UNIFORM", RND_UNIFORM);
536  ADD_CONST2("XMIPP_RND_GAUSSIAN", RND_GAUSSIAN);
537 
538  ADD_CONST2("DT_DEFAULT", DT_Default);
539  ADD_CONST2("DT_UNKNOWN", DT_Unknown);
540  ADD_CONST2("DT_UCHAR", DT_UChar);
541  ADD_CONST2("DT_SCHAR", DT_SChar);
542  ADD_CONST2("DT_USHORT", DT_UShort);
543  ADD_CONST2("DT_SHORT", DT_Short);
544  ADD_CONST2("DT_UINT", DT_UInt);
545  ADD_CONST2("DT_INT", DT_Int);
546  ADD_CONST2("DT_LONG", DT_Long);
547  ADD_CONST2("DT_FLOAT", DT_Float);
548  ADD_CONST2("DT_DOUBLE", DT_Double);
549  ADD_CONST2("DT_COMPLEXSHORT", DT_CShort);
550  ADD_CONST2("DT_COMPLEXINT", DT_CInt);
551  ADD_CONST2("DT_COMPLEXFLOAT", DT_CFloat);
552  ADD_CONST2("DT_COMPLEXDOUBLE", DT_CDouble);
553  ADD_CONST2("DT_BOOL", DT_Bool);
554  ADD_CONST2("DT_HALFFLOAT", DT_HalfFloat);
555  ADD_CONST2("DT_LASTENTRY", DT_LastEntry);
556 
557  ADD_CONST(VIEW_Z_NEG);
558  ADD_CONST(VIEW_Z_POS);
559  ADD_CONST(VIEW_Y_NEG);
560  ADD_CONST(VIEW_Y_POS);
561  ADD_CONST(VIEW_X_NEG);
562  ADD_CONST(VIEW_X_POS);
563 
564  ADD_CONST2("XMIPP_EQUAL_ACCURACY",XMIPP_EQUAL_ACCURACY);
565 
566  ADD_CONST(CW_CAST);
567  ADD_CONST(CW_CONVERT);
568  ADD_CONST(CW_ADJUST);
569  ADD_CONST(CW_LAST_LABEL);
570 
572  ADD_CONST(RLN_AREA_ID);
573  ADD_CONST(RLN_AREA_NAME);
574  ADD_CONST(RLN_COMMENT); // The RLN_COMMENT is handled specially as well
575 
576  ADD_CONST(RLN_CTF_BFACTOR);
577  ADD_CONST(RLN_CTF_SCALEFACTOR);
578  ADD_CONST(RLN_CTF_SAMPLING_RATE);
579  ADD_CONST(RLN_CTF_VOLTAGE);
580  ADD_CONST(RLN_CTF_DEFOCUSU);
581  ADD_CONST(RLN_CTF_DEFOCUSV);
582  ADD_CONST(RLN_CTF_DEFOCUS_ANGLE);
583  ADD_CONST(RLN_CTF_CS);
584  ADD_CONST(RLN_CTF_CA);
585  ADD_CONST(RLN_CTF_DETECTOR_PIXEL_SIZE);
586  ADD_CONST(RLN_CTF_ENERGY_LOSS);
587  ADD_CONST(RLN_CTF_FOM);
588  ADD_CONST(RLN_CTF_IMAGE);
589  ADD_CONST(RLN_CTF_LENS_STABILITY);
590  ADD_CONST(RLN_CTF_MAGNIFICATION);
591  ADD_CONST(RLN_CTF_CONVERGENCE_CONE);
592  ADD_CONST(RLN_CTF_LONGITUDINAL_DISPLACEMENT);
593  ADD_CONST(RLN_CTF_TRANSVERSAL_DISPLACEMENT);
594  ADD_CONST(RLN_CTF_Q0);
595  ADD_CONST(RLN_CTF_K);
596  ADD_CONST(RLN_CTF_VALUE);
597  ADD_CONST(RLN_CTF_PHASESHIFT);
598 
599  ADD_CONST(RLN_IMAGE_NAME);
600  ADD_CONST(RLN_IMAGE_RECONSTRUCT_NAME);
601  ADD_CONST(RLN_IMAGE_ID);
602  ADD_CONST(RLN_IMAGE_ENABLED);
603  ADD_CONST(RLN_IMAGE_DATATYPE);
604  ADD_CONST(RLN_IMAGE_DIMENSIONALITY);
605  ADD_CONST(RLN_IMAGE_BEAMTILT_X);
606  ADD_CONST(RLN_IMAGE_BEAMTILT_Y);
607  ADD_CONST(RLN_IMAGE_BEAMTILT_GROUP);
608  ADD_CONST(RLN_IMAGE_COORD_X);
609  ADD_CONST(RLN_IMAGE_COORD_Y);
610  ADD_CONST(RLN_IMAGE_COORD_Z);
611  ADD_CONST(RLN_IMAGE_FRAME_NR);
612  ADD_CONST(RLN_IMAGE_MAGNIFICATION_CORRECTION);
613  ADD_CONST(RLN_IMAGE_NORM_CORRECTION);
614  ADD_CONST(RLN_IMAGE_SAMPLINGRATE);
615  ADD_CONST(RLN_IMAGE_SAMPLINGRATE_X);
616  ADD_CONST(RLN_IMAGE_SAMPLINGRATE_Y);
617  ADD_CONST(RLN_IMAGE_SAMPLINGRATE_Z);
618  ADD_CONST(RLN_IMAGE_SIZE);
619  ADD_CONST(RLN_IMAGE_SIZEX);
620  ADD_CONST(RLN_IMAGE_SIZEY);
621  ADD_CONST(RLN_IMAGE_SIZEZ);
622  ADD_CONST(RLN_IMAGE_STATS_MIN);
623  ADD_CONST(RLN_IMAGE_STATS_MAX);
624  ADD_CONST(RLN_IMAGE_STATS_AVG);
625  ADD_CONST(RLN_IMAGE_STATS_STDDEV);
626  ADD_CONST(RLN_IMAGE_STATS_SKEW);
627  ADD_CONST(RLN_IMAGE_STATS_KURT);
628  ADD_CONST(RLN_IMAGE_WEIGHT);
629 
630  ADD_CONST(RLN_MATRIX_1_1);
631  ADD_CONST(RLN_MATRIX_1_2);
632  ADD_CONST(RLN_MATRIX_1_3);
633  ADD_CONST(RLN_MATRIX_2_1);
634  ADD_CONST(RLN_MATRIX_2_2);
635  ADD_CONST(RLN_MATRIX_2_3);
636  ADD_CONST(RLN_MATRIX_3_1);
637  ADD_CONST(RLN_MATRIX_3_2);
638  ADD_CONST(RLN_MATRIX_3_3);
639 
640  ADD_CONST(RLN_MICROGRAPH_ID);
641  ADD_CONST(RLN_MICROGRAPH_MOVIE_NAME);
642  ADD_CONST(RLN_MICROGRAPH_NAME);
643  ADD_CONST(RLN_MICROGRAPH_TILT_ANGLE);
644  ADD_CONST(RLN_MICROGRAPH_TILT_AXIS_DIRECTION);
645  ADD_CONST(RLN_MICROGRAPH_TILT_AXIS_OUTOFPLANE);
646 
647  ADD_CONST(RLN_MLMODEL_ACCURACY_ROT);
648  ADD_CONST(RLN_MLMODEL_ACCURACY_TRANS);
649  ADD_CONST(RLN_MLMODEL_AVE_PMAX);
650  ADD_CONST(RLN_MLMODEL_CURRENT_RESOLUTION);
651  ADD_CONST(RLN_MLMODEL_CURRENT_SIZE);
652  ADD_CONST(RLN_MLMODEL_DATA_VS_PRIOR_REF);
653  ADD_CONST(RLN_MLMODEL_DIMENSIONALITY);
654  ADD_CONST(RLN_MLMODEL_DIMENSIONALITY_DATA);
655  ADD_CONST(RLN_MLMODEL_DIFF2_HALVES_REF);
656  ADD_CONST(RLN_MLMODEL_ESTIM_RESOL_REF);
657  ADD_CONST(RLN_MLMODEL_FOURIER_COVERAGE_REF);
658  ADD_CONST(RLN_MLMODEL_FOURIER_COVERAGE_TOTAL_REF);
659  ADD_CONST(RLN_MLMODEL_FSC_HALVES_REF);
660  ADD_CONST(RLN_MLMODEL_GROUP_NAME);
661  ADD_CONST(RLN_MLMODEL_GROUP_NO);
662  ADD_CONST(RLN_MLMODEL_GROUP_NR_PARTICLES);
663  ADD_CONST(RLN_MLMODEL_GROUP_SCALE_CORRECTION);
664  ADD_CONST(RLN_MLMODEL_INTERPOLATOR);
665  ADD_CONST(RLN_MLMODEL_LL);
666  ADD_CONST(RLN_MLMODEL_MINIMUM_RADIUS_NN_INTERPOLATION);
667  ADD_CONST(RLN_MLMODEL_NORM_CORRECTION_AVG);
668  ADD_CONST(RLN_MLMODEL_NR_BODIES);
669  ADD_CONST(RLN_MLMODEL_NR_CLASSES);
670  ADD_CONST(RLN_MLMODEL_NR_GROUPS);
671  ADD_CONST(RLN_MLMODEL_ORIGINAL_SIZE);
672  ADD_CONST(RLN_MLMODEL_ORIENTABILITY_CONTRIBUTION);
673  ADD_CONST(RLN_MLMODEL_PADDING_FACTOR);
674  ADD_CONST(RLN_MLMODEL_PDF_CLASS);
675  ADD_CONST(RLN_MLMODEL_PRIOR_OFFX_CLASS);
676  ADD_CONST(RLN_MLMODEL_PRIOR_OFFY_CLASS);
677  ADD_CONST(RLN_MLMODEL_PDF_ORIENT);
678  ADD_CONST(RLN_MLMODEL_PIXEL_SIZE);
679  ADD_CONST(RLN_MLMODEL_POWER_REF);
680  ADD_CONST(RLN_MLMODEL_PRIOR_MODE);
681  ADD_CONST(RLN_MLMODEL_SIGMA_OFFSET);
682  ADD_CONST(RLN_MLMODEL_SIGMA_ROT);
683  ADD_CONST(RLN_MLMODEL_SIGMA_TILT);
684  ADD_CONST(RLN_MLMODEL_SIGMA_PSI);
685  ADD_CONST(RLN_MLMODEL_REF_IMAGE);
686  ADD_CONST(RLN_MLMODEL_SIGMA2_NOISE);
687  ADD_CONST(RLN_MLMODEL_SIGMA2_REF);
688  ADD_CONST(RLN_MLMODEL_SSNR_REF);
689  ADD_CONST(RLN_MLMODEL_TAU2_FUDGE_FACTOR);
690  ADD_CONST(RLN_MLMODEL_TAU2_REF);
691  ADD_CONST(RLN_OPTIMISER_ACCURACY_ROT);
692  ADD_CONST(RLN_OPTIMISER_ACCURACY_TRANS);
693  ADD_CONST(RLN_OPTIMISER_ADAPTIVE_FRACTION);
694  ADD_CONST(RLN_OPTIMISER_ADAPTIVE_OVERSAMPLING);
695  ADD_CONST(RLN_OPTIMISER_AUTO_LOCAL_HP_ORDER);
696  ADD_CONST(RLN_OPTIMISER_AVAILABLE_MEMORY);
697  ADD_CONST(RLN_OPTIMISER_BEST_RESOL_THUS_FAR);
698  ADD_CONST(RLN_OPTIMISER_CHANGES_OPTIMAL_OFFSETS);
699  ADD_CONST(RLN_OPTIMISER_CHANGES_OPTIMAL_ORIENTS);
700  ADD_CONST(RLN_OPTIMISER_CHANGES_OPTIMAL_CLASSES);
701  ADD_CONST(RLN_OPTIMISER_COARSE_SIZE);
702  ADD_CONST(RLN_OPTIMISER_DATA_ARE_CTF_PHASE_FLIPPED);
703  ADD_CONST(RLN_OPTIMISER_DATA_STARFILE);
704  ADD_CONST(RLN_OPTIMISER_DO_AUTO_REFINE);
705  ADD_CONST(RLN_OPTIMISER_DO_ONLY_FLIP_CTF_PHASES);
706  ADD_CONST(RLN_OPTIMISER_DO_CORRECT_CTF);
707  ADD_CONST(RLN_OPTIMISER_DO_CORRECT_MAGNIFICATION);
708  ADD_CONST(RLN_OPTIMISER_DO_CORRECT_NORM);
709  ADD_CONST(RLN_OPTIMISER_DO_CORRECT_SCALE);
710  ADD_CONST(RLN_OPTIMISER_DO_REALIGN_MOVIES);
711  ADD_CONST(RLN_OPTIMISER_DO_MAP);
712  ADD_CONST(RLN_OPTIMISER_DO_SOLVENT_FLATTEN);
713  ADD_CONST(RLN_OPTIMISER_DO_SKIP_ALIGN);
714  ADD_CONST(RLN_OPTIMISER_DO_SKIP_ROTATE);
715  ADD_CONST(RLN_OPTIMISER_DO_SPLIT_RANDOM_HALVES);
716  ADD_CONST(RLN_OPTIMISER_DO_ZERO_MASK);
717  ADD_CONST(RLN_OPTIMISER_FIX_SIGMA_NOISE);
718  ADD_CONST(RLN_OPTIMISER_FIX_SIGMA_OFFSET);
719  ADD_CONST(RLN_OPTIMISER_FIX_TAU);
720  ADD_CONST(RLN_OPTIMISER_HAS_CONVERGED);
721  ADD_CONST(RLN_OPTIMISER_HAS_HIGH_FSC_AT_LIMIT);
722  ADD_CONST(RLN_OPTIMISER_HAS_LARGE_INCR_SIZE_ITER_AGO);
723  ADD_CONST(RLN_OPTIMISER_HIGHRES_LIMIT_EXP);
724  ADD_CONST(RLN_OPTIMISER_IGNORE_CTF_UNTIL_FIRST_PEAK);
725  ADD_CONST(RLN_OPTIMISER_INCR_SIZE);
726  ADD_CONST(RLN_OPTIMISER_ITERATION_NO);
727  ADD_CONST(RLN_OPTIMISER_LOCAL_SYMMETRY_FILENAME);
728  ADD_CONST(RLN_OPTIMISER_LOWRES_JOIN_RANDOM_HALVES);
729  ADD_CONST(RLN_OPTIMISER_MAGNIFICATION_RANGE);
730  ADD_CONST(RLN_OPTIMISER_MAGNIFICATION_STEP);
731  ADD_CONST(RLN_OPTIMISER_MAX_COARSE_SIZE);
732  ADD_CONST(RLN_OPTIMISER_MAX_NR_POOL);
733  ADD_CONST(RLN_OPTIMISER_MODEL_STARFILE);
734  ADD_CONST(RLN_OPTIMISER_MODEL_STARFILE2);
735  ADD_CONST(RLN_OPTIMISER_NR_ITERATIONS);
736  ADD_CONST(RLN_OPTIMISER_NR_ITER_WO_RESOL_GAIN);
737  ADD_CONST(RLN_OPTIMISER_NR_ITER_WO_HIDDEN_VAR_CHANGES);
738  ADD_CONST(RLN_OPTIMISER_OUTPUT_ROOTNAME);
739  ADD_CONST(RLN_OPTIMISER_PARTICLE_DIAMETER);
740  ADD_CONST(RLN_OPTIMISER_RADIUS_MASK_3D_MAP);
741  ADD_CONST(RLN_OPTIMISER_RADIUS_MASK_EXP_PARTICLES);
742  ADD_CONST(RLN_OPTIMISER_RANDOM_SEED);
743  ADD_CONST(RLN_OPTIMISER_REFS_ARE_CTF_CORRECTED);
744  ADD_CONST(RLN_OPTIMISER_SAMPLING_STARFILE);
745  ADD_CONST(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_CLASSES);
746  ADD_CONST(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_OFFSETS);
747  ADD_CONST(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_ORIENTS);
748  ADD_CONST(RLN_OPTIMISER_SOLVENT_MASK_NAME);
749  ADD_CONST(RLN_OPTIMISER_SOLVENT_MASK2_NAME);
750  ADD_CONST(RLN_OPTIMISER_TAU_SPECTRUM_NAME);
751  ADD_CONST(RLN_OPTIMISER_USE_TOO_COARSE_SAMPLING);
752  ADD_CONST(RLN_OPTIMISER_WIDTH_MASK_EDGE);
753  ADD_CONST(RLN_ORIENT_FLIP);
754  ADD_CONST(RLN_ORIENT_ID);
755  ADD_CONST(RLN_ORIENT_ORIGIN_X);
756  ADD_CONST(RLN_ORIENT_ORIGIN_X_PRIOR);
757  ADD_CONST(RLN_ORIENT_ORIGIN_Y);
758  ADD_CONST(RLN_ORIENT_ORIGIN_Y_PRIOR);
759  ADD_CONST(RLN_ORIENT_ORIGIN_Z);
760  ADD_CONST(RLN_ORIENT_ORIGIN_Z_PRIOR);
761  ADD_CONST(RLN_ORIENT_ROT);
762  ADD_CONST(RLN_ORIENT_ROT_PRIOR);
763  ADD_CONST(RLN_ORIENT_TILT);
764  ADD_CONST(RLN_ORIENT_TILT_PRIOR);
765  ADD_CONST(RLN_ORIENT_PSI);
766  ADD_CONST(RLN_ORIENT_PSI_PRIOR);
767  ADD_CONST(RLN_ORIENT_PSI_PRIOR_FLIP_RATIO);
768 
769  ADD_CONST(RLN_PARTICLE_AUTOPICK_FOM);
770  ADD_CONST(RLN_PARTICLE_CLASS);
771  ADD_CONST(RLN_PARTICLE_DLL);
772  ADD_CONST(RLN_PARTICLE_ID);
773  ADD_CONST(RLN_PARTICLE_FOM);
774  ADD_CONST(RLN_PARTICLE_KL_DIVERGENCE);
775  ADD_CONST(RLN_PARTICLE_MOVIE_RUNNING_AVG);
776  ADD_CONST(RLN_PARTICLE_RANDOM_SUBSET);
777  ADD_CONST(RLN_PARTICLE_NAME);
778  ADD_CONST(RLN_PARTICLE_NR_FRAMES);
779  ADD_CONST(RLN_PARTICLE_NR_FRAMES_AVG);
780  ADD_CONST(RLN_PARTICLE_ORI_NAME);
781  ADD_CONST(RLN_PARTICLE_NR_SIGNIFICANT_SAMPLES);
782  ADD_CONST(RLN_PARTICLE_PMAX);
783 
784  // New helical labes in Relion 2.x
785  ADD_CONST(RLN_PARTICLE_HELICAL_TUBE_ID);
786  ADD_CONST(RLN_PARTICLE_HELICAL_TUBE_PITCH);
787  ADD_CONST(RLN_PARTICLE_HELICAL_TRACK_LENGTH);
788  ADD_CONST(RLN_MLMODEL_HELICAL_NR_ASU);
789  ADD_CONST(RLN_MLMODEL_HELICAL_TWIST);
790  ADD_CONST(RLN_MLMODEL_HELICAL_TWIST_MIN);
791  ADD_CONST(RLN_MLMODEL_HELICAL_TWIST_MAX);
792  ADD_CONST(RLN_MLMODEL_HELICAL_TWIST_INITIAL_STEP);
793  ADD_CONST(RLN_MLMODEL_HELICAL_RISE);
794  ADD_CONST(RLN_MLMODEL_HELICAL_RISE_MIN);
795  ADD_CONST(RLN_MLMODEL_HELICAL_RISE_MAX);
796  ADD_CONST(RLN_MLMODEL_HELICAL_RISE_INITIAL_STEP);
797  ADD_CONST(RLN_OPTIMISER_DO_HELICAL_REFINE);
798  ADD_CONST(RLN_OPTIMISER_HELICAL_TWIST_INITIAL);
799  ADD_CONST(RLN_OPTIMISER_HELICAL_RISE_INITIAL);
800  ADD_CONST(RLN_OPTIMISER_HELICAL_Z_PERCENTAGE);
801  ADD_CONST(RLN_OPTIMISER_HELICAL_TUBE_INNER_DIAMETER);
802  ADD_CONST(RLN_OPTIMISER_HELICAL_TUBE_OUTER_DIAMETER);
803  ADD_CONST(RLN_OPTIMISER_HELICAL_SYMMETRY_LOCAL_REFINEMENT);
804  ADD_CONST(RLN_OPTIMISER_HELICAL_SIGMA_DISTANCE);
805  ADD_CONST(RLN_OPTIMISER_IGNORE_HELICAL_SYMMETRY);
806  ADD_CONST(RLN_OPTIMISER_HELICAL_KEEP_TILT_PRIOR_FIXED);
807  ADD_CONST(RLN_PARTICLE_HELICAL_TUBE_ID);
808  ADD_CONST(RLN_PARTICLE_HELICAL_TUBE_PITCH);
809  ADD_CONST(RLN_PARTICLE_HELICAL_TRACK_LENGTH);
810  ADD_CONST(RLN_SAMPLING_HELICAL_OFFSET_STEP);
811 
812  // New SGD labels in Relion 2.1
813  ADD_CONST(RLN_MLMODEL_SGD_GRADIENT_IMAGE);
814  ADD_CONST(RLN_OPTIMISER_DO_SGD);
815  ADD_CONST(RLN_OPTIMISER_SGD_MU);
816  ADD_CONST(RLN_OPTIMISER_SGD_SIGMA2FUDGE_INI);
817  ADD_CONST(RLN_OPTIMISER_SGD_SIGMA2FUDGE_HALFLIFE);
818  ADD_CONST(RLN_OPTIMISER_SGD_SUBSET_START);
819  ADD_CONST(RLN_OPTIMISER_SGD_SUBSET_SIZE);
820  ADD_CONST(RLN_OPTIMISER_SGD_WRITE_EVERY_SUBSET);
821  ADD_CONST(RLN_OPTIMISER_SGD_MAX_SUBSETS);
822  ADD_CONST(RLN_OPTIMISER_SGD_STEPSIZE);
823  ADD_CONST(RLN_OPTIMISER_HIGHRES_LIMIT_SGD);
824 
825  ADD_CONST(RLN_POSTPROCESS_BFACTOR);
826  ADD_CONST(RLN_POSTPROCESS_FINAL_RESOLUTION);
827  ADD_CONST(RLN_POSTPROCESS_FSC_TRUE);
828  ADD_CONST(RLN_POSTPROCESS_FSC_MASKED);
829  ADD_CONST(RLN_POSTPROCESS_FSC_UNMASKED);
830  ADD_CONST(RLN_POSTPROCESS_FSC_RANDOM_MASKED);
831  ADD_CONST(RLN_POSTPROCESS_GUINIER_FIT_CORRELATION);
832  ADD_CONST(RLN_POSTPROCESS_GUINIER_FIT_INTERCEPT);
833  ADD_CONST(RLN_POSTPROCESS_GUINIER_FIT_SLOPE);
834  ADD_CONST(RLN_POSTPROCESS_GUINIER_VALUE_IN);
835  ADD_CONST(RLN_POSTPROCESS_GUINIER_VALUE_INVMTF);
836  ADD_CONST(RLN_POSTPROCESS_GUINIER_VALUE_WEIGHTED);
837  ADD_CONST(RLN_POSTPROCESS_GUINIER_VALUE_SHARPENED);
838  ADD_CONST(RLN_POSTPROCESS_GUINIER_VALUE_INTERCEPT);
839  ADD_CONST(RLN_POSTPROCESS_GUINIER_RESOL_SQUARED);
840  ADD_CONST(RLN_POSTPROCESS_MTF_VALUE);
841  ADD_CONST(RLN_SAMPLING_IS_3D);
842  ADD_CONST(RLN_SAMPLING_IS_3D_TRANS);
843  ADD_CONST(RLN_SAMPLING_HEALPIX_ORDER);
844  ADD_CONST(RLN_SAMPLING_LIMIT_TILT);
845  ADD_CONST(RLN_SAMPLING_OFFSET_RANGE);
846  ADD_CONST(RLN_SAMPLING_OFFSET_STEP);
847  ADD_CONST(RLN_SAMPLING_PERTURB);
848  ADD_CONST(RLN_SAMPLING_PERTURBATION_FACTOR);
849  ADD_CONST(RLN_SAMPLING_PRIOR_MODE);
850  ADD_CONST(RLN_SAMPLING_PSI_STEP);
851  ADD_CONST(RLN_SAMPLING_SIGMA_ROT);
852  ADD_CONST(RLN_SAMPLING_SIGMA_TILT);
853  ADD_CONST(RLN_SAMPLING_SIGMA_PSI);
854  ADD_CONST(RLN_SAMPLING_SYMMETRY);
855 
856  ADD_CONST(RLN_SELECTED);
857  ADD_CONST(RLN_SELECT_PARTICLES_ZSCORE);
858  ADD_CONST(RLN_SORTED_IDX);
859  ADD_CONST(RLN_PERFRAME_CUMULATIVE_WEIGHT);
860  ADD_CONST(RLN_PERFRAME_RELATIVE_WEIGHT);
861 
862  ADD_CONST(RLN_RESOLUTION);
863  ADD_CONST(RLN_RESOLUTION_ANGSTROM);
864  ADD_CONST(RLN_RESOLUTION_INVPIXEL);
865  ADD_CONST(RLN_SPECTRAL_IDX);
866 
867 }
RLN_OPTIMISER_ADAPTIVE_FRACTION
Definition: metadata_label.h:658
RLN_OPTIMISER_MODEL_STARFILE2
Definition: metadata_label.h:712
YELLOW
Definition: xmipp_color.h:47
MDL_OBJID
object id (int), NOTE: This label is special and shouldn't be used
Definition: metadata_label.h:48
MDL_RESOLUTION_LOG_STRUCTURE_FACTOR
Logarithm of the structure factor.
Definition: metadata_label.h:393
MDL_CONTINUOUS_SCALE_Y
scale y of continuous assignment
Definition: metadata_label.h:120
MDL_CTF_BG_GAUSSIAN2_SIGMAU
CTF Background parameter.
Definition: metadata_label.h:179
RLN_CTF_SCALEFACTOR
linear scale-factor
Definition: metadata_label.h:524
TAGLABEL_PSD
Definition: metadata_label.h:972
MDL_ZSIZE
Z size (int)
Definition: metadata_label.h:516
RLN_IMAGE_BEAMTILT_X
Definition: metadata_label.h:554
RLN_SAMPLING_IS_3D_TRANS
Definition: metadata_label.h:810
MDL_CTF_K
CTF gain.
Definition: metadata_label.h:163
RLN_IMAGE_STATS_STDDEV
Definition: metadata_label.h:575
MDL_LL
contribution of an image to log-likelihood value
Definition: metadata_label.h:269
MDL_ASSIGNED_DIR_REF_CC
correlation of references assigned by two methods
Definition: metadata_label.h:380
MDL_SCORE_BY_LBP
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:420
MDL_SCORE_BY_ZERNIKE
< Micrographs Gini Coeff. (double)
Definition: metadata_label.h:427
RLN_OPTIMISER_DO_SGD
Definition: metadata_label.h:679
RLN_MICROGRAPH_MOVIE_NAME
Definition: metadata_label.h:593
MDL_DM3_VALUE
Definition: metadata_label.h:226
MDL_CONTINUOUS_X
X shift of continuous assignment.
Definition: metadata_label.h:113
RLN_SAMPLING_LIMIT_TILT
Definition: metadata_label.h:813
MDL_REFMD
Name of Metadata file for all references(string)
Definition: metadata_label.h:379
MDL_MICROGRAPH_ORIGINAL
Name of the original micrograph, MDL_MICROGRAPH is probably a downsampled version of this one (std::s...
Definition: metadata_label.h:289
MDL_NEIGHBOR
Particular neighbor (pointed myNEIGHBORS)
Definition: metadata_label.h:308
RLN_MLMODEL_DIFF2_HALVES_REF
Definition: metadata_label.h:608
MDL_STDDEV
tsne coefficients in 2D
Definition: metadata_label.h:452
MDL_ANGLE_ROT
Rotation angle of an image (double,degrees)
Definition: metadata_label.h:55
MDL_VOLUME_SCORE3
< Score 2 for volumes
Definition: metadata_label.h:478
NATURAL
Definition: metadata_sql_operations.h:44
MDL_SCORE_BY_ALIGNABILITY_ACCURACY
score by alignability (double)
Definition: metadata_label.h:410
RLN_IMAGE_SIZE
Definition: metadata_label.h:568
MDL_BLOCK_NUMBER
Current block number (for incremental EM)
Definition: metadata_label.h:77
MDL_WEIGHT_ALIGNABILITY
Weight due to Alignability Precision and Accuracy.
Definition: metadata_label.h:491
MDL_PRJ_PSI_NOISE
Definition: metadata_label.h:357
MDL_CTF_DEFOCUSU
Defocus U (Angstroms)
Definition: metadata_label.h:135
MDL_MICROGRAPH_TILTED_ORIGINAL
Name of the corresponding original, tilted micrograph (std::string)
Definition: metadata_label.h:291
MDL_SCORE_BY_PCA_RESIDUAL_EXP
Definition: metadata_label.h:406
MDL_CORRELATION_WEIGHT
weighted correlation value between a particle and its assigned projection taking into the difference ...
Definition: metadata_label.h:124
MDL_AVG_CHANGES_ORIENTATIONS
Definition: metadata_label.h:71
RLN_OPTIMISER_USE_TOO_COARSE_SAMPLING
Definition: metadata_label.h:737
MDL_ANGLE_TILT2
Tilting angle of an image (double,degrees)
Definition: metadata_label.h:60
RLN_CTF_K
CTF gain.
Definition: metadata_label.h:543
RLN_PARTICLE_CLASS
Definition: metadata_label.h:757
RLN_OPTIMISER_ITERATION_NO
Definition: metadata_label.h:704
MDL_RESOLUTION_SSNR
Fourier shell correlation (double)
Definition: metadata_label.h:394
RLN_IMAGE_SAMPLINGRATE_X
Definition: metadata_label.h:565
MDL_ORDER
Definition: metadata_label.h:323
NATURAL_JOIN
Definition: metadata_sql_operations.h:38
RLN_POSTPROCESS_GUINIER_RESOL_SQUARED
Definition: metadata_label.h:806
MDL_RESOLUTION_FSO
Fourier shell occupancy (double)
Definition: metadata_label.h:391
MDL_SHIFT_DIFF0
shift difference (double)
Definition: metadata_label.h:442
MDL_SAMPLINGRATE_Y
sampling rate in A/pixel (double)
Definition: metadata_label.h:401
metadata_sql.h
MDL_CTF_SAMPLING_RATE
Sampling rate.
Definition: metadata_label.h:131
RLN_MLMODEL_HELICAL_RISE_INITIAL_STEP
Definition: metadata_label.h:625
RND_UNIFORM
Definition: xmipp_random_mode.h:34
RLN_OPTIMISER_SGD_SUBSET_START
Definition: metadata_label.h:726
MDL_RESOLUTION_LOCAL_RESIDUE
Frequency in A of the local resolution of a residue (double)
Definition: metadata_label.h:392
MDL_MACRO_CMD
Definition: metadata_label.h:342
MDL_SHIFT_Y2
Shift for the image in the Y axis (double)
Definition: metadata_label.h:436
MDL_CTF_BG_GAUSSIAN_ANGLE
CTF Background parameter.
Definition: metadata_label.h:172
RLN_SAMPLING_HELICAL_OFFSET_STEP
Definition: metadata_label.h:812
RLN_MLMODEL_POWER_REF
Definition: metadata_label.h:642
addLabels
void addLabels(PyObject *dict)
Definition: python_constants.cpp:52
RLN_CTF_Q0
Amplitude contrast.
Definition: metadata_label.h:542
MDL_MAGNIFICATION
Definition: metadata_label.h:277
RLN_SAMPLING_SIGMA_PSI
Definition: metadata_label.h:822
MDL_SYMNO
Symmetry number for a projection (used in ART)
Definition: metadata_label.h:459
RLN_CTF_DEFOCUSV
Defocus V (Angstroms)
Definition: metadata_label.h:528
MDL_SAMPLINGRATE_X
sampling rate in A/pixel (double)
Definition: metadata_label.h:400
MDL_CRYSTAL_CELLY
Cell location for crystals.
Definition: metadata_label.h:101
MDL_WEIGHT_PRECISION_ALIGNABILITY
Weight due to Alignability Precision.
Definition: metadata_label.h:490
NE
Not equal.
Definition: metadata_query.h:91
RLN_OPTIMISER_MAX_NR_POOL
Definition: metadata_label.h:710
RLN_OPTIMISER_DO_CORRECT_CTF
Definition: metadata_label.h:672
xmipp_transformation::BSPLINE2
Definition: transformations_defines.h:32
HEADER
Definition: xmipp_image_base.h:91
MDL_SCORE_BY_ENTROPY
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:417
LT
Less than.
Definition: metadata_query.h:93
MDL_CTF_CRIT_PSDVARIANCE
PSD variance.
Definition: metadata_label.h:199
MDL_VOLUME_SCORE_SUM
Definition: metadata_label.h:472
MDL_SAMPLINGRATE_Z
sampling rate in A/pixel (double)
Definition: metadata_label.h:402
MDL_WEIGHT_JUMPER
Weight due to angular jumping.
Definition: metadata_label.h:484
MDL_MICROGRAPH_PARTICLES
Name of a position file (std::string)
Definition: metadata_label.h:288
MDL_RESIDUE
Definition: metadata_label.h:382
MDL_IMAGE3
Image associated to this object (std::string)
Definition: metadata_label.h:257
RLN_MATRIX_3_3
Definition: metadata_label.h:590
LABEL_INT
Definition: metadata_label.h:951
RLN_OPTIMISER_RANDOM_SEED
Definition: metadata_label.h:720
DT_LastEntry
Definition: xmipp_datatype.h:59
MDL_SCORE_BY_ALIGNABILITY_PRECISION_EXP
score by alignability experimental particles (double)
Definition: metadata_label.h:411
RLN_OPTIMISER_SGD_SIGMA2FUDGE_INI
Definition: metadata_label.h:724
MDL_CTF_DEFOCUS_ANGLE
Defocus angle (degrees)
Definition: metadata_label.h:151
RLN_CTF_VOLTAGE
Microscope voltage (kV)
Definition: metadata_label.h:526
RLN_CTF_LONGITUDINAL_DISPLACEMENT
Longitudinal displacement.
Definition: metadata_label.h:540
RLN_OPTIMISER_HELICAL_SIGMA_DISTANCE
Definition: metadata_label.h:697
MDL_ANGLE_ROT_DIFF
difference between rot angles (double,degrees)
Definition: metadata_label.h:58
MDL_SCORE_BY_HISTDIST
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:419
RLN_OPTIMISER_HIGHRES_LIMIT_EXP
Definition: metadata_label.h:701
RLN_OPTIMISER_MAGNIFICATION_RANGE
Definition: metadata_label.h:707
RLN_MATRIX_2_2
Definition: metadata_label.h:586
xmipp_transformation::NEAREST
Definition: transformations_defines.h:32
RLN_PARTICLE_HELICAL_TUBE_PITCH
Definition: metadata_label.h:773
RLN_CTF_SAMPLING_RATE
Sampling rate.
Definition: metadata_label.h:525
MDL_MISSINGREGION_THX0
Initial tilt angle in X for missing region in subtomogram.
Definition: metadata_label.h:298
MDL_IMAGE_IDX
Index of an image within a list (size_t)
Definition: metadata_label.h:248
MDL_MACRO_CMD_ARGS
Definition: metadata_label.h:343
MDL_CORR_DENOISED_PROJECTION
Correlation between the denoised image and the projection proposed.
Definition: metadata_label.h:94
MDL_SUM
Sum of elements of a given type (double) [this is a genereic type do not use to transfer information ...
Definition: metadata_label.h:457
RLN_OPTIMISER_HELICAL_SYMMETRY_LOCAL_REFINEMENT
Definition: metadata_label.h:696
MDL_GATHER_ID
Definition: metadata_label.h:49
MDL_PRJ_TILT_RANGE
< Type of randomness for Tilt (std::string)
Definition: metadata_label.h:365
MDL_SCORE_BY_ALIGNABILITY_PRECISION_REF
score by alignability references (double)
Definition: metadata_label.h:412
RLN_SPECTRAL_IDX
Definition: metadata_label.h:835
MDL_CTF_INPUTPARAMS
Parameters file for the CTF Model (std::string)
Definition: metadata_label.h:128
RLN_OPTIMISER_HELICAL_TUBE_OUTER_DIAMETER
Definition: metadata_label.h:695
RLN_MLMODEL_GROUP_NAME
Definition: metadata_label.h:613
MDL_CONTINUOUS_FLIP
Flip of continuous assignment.
Definition: metadata_label.h:115
xmipp_image_base.h
AGGR_MIN
Definition: metadata_sql_operations.h:32
RLN_IMAGE_STATS_AVG
Definition: metadata_label.h:574
MDL_CTF_BG_GAUSSIAN_K
CTF Background parameter.
Definition: metadata_label.h:167
RLN_IMAGE_COORD_Y
Definition: metadata_label.h:558
MD_APPEND
Definition: metadata_writemode.h:34
MDL_TOMOGRAM_VOLUME
Name for the reconstructed tomogram volume (std::string)
Definition: metadata_label.h:460
RLN_OPTIMISER_MODEL_STARFILE
Definition: metadata_label.h:711
MDL_COST_PERCENTILE
Cost percentile for the image (double)
Definition: metadata_label.h:91
MDL_RESOLUTION_RFACTOR
Definition: metadata_label.h:396
BLUE
Definition: xmipp_color.h:48
MDL_Z
Z component (double)
Definition: metadata_label.h:503
MDL_DIMENSIONS_2D
Definition: metadata_label.h:372
MDL_GRAPH_DISTANCE2MAX
Distance to graph filtered max.
Definition: metadata_label.h:239
MDL_PRJ_ROT_RANDSTR
< Rotational angle dev and mean noise (vector double)
Definition: metadata_label.h:361
MDL_CTF_CRIT_NONASTIGMATICVALIDITY
Maximum frequency (in Angstroms) at which non-astigmatic CTF correction is valid. ...
Definition: metadata_label.h:187
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_CLASSES
Definition: metadata_label.h:731
MDL_SIGNALCHANGE
Signal change for an image.
Definition: metadata_label.h:447
MDL_MAX
Maximum value (double)
Definition: metadata_label.h:282
RLN_MICROGRAPH_TILT_ANGLE
Definition: metadata_label.h:596
RLN_MLMODEL_LL
Definition: metadata_label.h:628
MDL_RESOLUTION_ANISOTROPY
Resolution anisotropy used to store the significance of the Bingham Test (double) ...
Definition: metadata_label.h:383
RLN_IMAGE_COORD_Z
Definition: metadata_label.h:559
MDL_ANGLE_TILT
Tilting angle of an image (double,degrees)
Definition: metadata_label.h:59
MDL_PICKING_PARTICLE_SIZE
Particle size for particle picking.
Definition: metadata_label.h:349
RLN_OPTIMISER_DATA_ARE_CTF_PHASE_FLIPPED
Definition: metadata_label.h:667
RLN_POSTPROCESS_GUINIER_FIT_SLOPE
Definition: metadata_label.h:800
RLN_MLMODEL_HELICAL_NR_ASU
Definition: metadata_label.h:617
RLN_IMAGE_FRAME_NR
Definition: metadata_label.h:560
MDL_WEIGHT_REALCORR
Weight due correlation between two images/subtomos.
Definition: metadata_label.h:486
MDL_PICKING_AUTOPARTICLES_SIZE
Number of automatic particles picked.
Definition: metadata_label.h:350
RLN_MLMODEL_HELICAL_TWIST_MIN
Definition: metadata_label.h:619
xmipp_transformation::LINEAR
Definition: transformations_defines.h:32
RLN_OPTIMISER_RADIUS_MASK_3D_MAP
Definition: metadata_label.h:718
MDL_ANGLE_DIFF0
difference between two angles (double,degrees)
Definition: metadata_label.h:63
SUBSTRACTION
Definition: metadata_sql_operations.h:38
RLN_PARTICLE_HELICAL_TRACK_LENGTH
Definition: metadata_label.h:774
MDL_MISSINGREGION_THY0
Initial tilt angle in Y for missing region in subtomogram.
Definition: metadata_label.h:296
AGGR_SUM
Definition: metadata_sql_operations.h:32
RLN_ORIENT_TILT_PRIOR
Definition: metadata_label.h:751
RLN_IMAGE_MAGNIFICATION_CORRECTION
Definition: metadata_label.h:561
MDL_SHIFT_X
Shift for the image in the X axis (double)
Definition: metadata_label.h:431
RLN_IMAGE_RECONSTRUCT_NAME
Definition: metadata_label.h:549
TAGLABEL_STACK
Definition: metadata_label.h:970
RLN_OPTIMISER_SGD_SUBSET_SIZE
Definition: metadata_label.h:727
MDL_SCORE_BY_ALIGNABILITY_PRECISION
score by alignability (double)
Definition: metadata_label.h:409
MDL_CTF_CRIT_FIRSTZEROAVG
First zero average (in Angstroms)
Definition: metadata_label.h:192
RLN_OPTIMISER_SAMPLING_STARFILE
Definition: metadata_label.h:722
RLN_SAMPLING_OFFSET_STEP
Definition: metadata_label.h:815
RLN_OPTIMISER_HAS_LARGE_INCR_SIZE_ITER_AGO
Definition: metadata_label.h:690
MDL_TSID
Tilt series id (std::string)
Definition: metadata_label.h:463
ADD_CONST
#define ADD_CONST(label)
Definition: python_constants.cpp:48
RLN_PARTICLE_ID
Definition: metadata_label.h:759
MDL_CTF_CONVERGENCE_CONE
Convergence cone.
Definition: metadata_label.h:159
RLN_IMAGE_STATS_MIN
Definition: metadata_label.h:572
TAGLABEL_TEXTFILE
Definition: metadata_label.h:965
RLN_SAMPLING_PSI_STEP
Definition: metadata_label.h:819
RLN_OPTIMISER_CHANGES_OPTIMAL_ORIENTS
Definition: metadata_label.h:664
MDL_ZSCORE_SHAPE1
Z Score (double)
Definition: metadata_label.h:512
RLN_SAMPLING_OFFSET_RANGE
Definition: metadata_label.h:814
MDL_PRJ_ANGFILE
File for generated angles.
Definition: metadata_label.h:356
MDL_GOOD_REGION_SCORE
Z Score (double)
Definition: metadata_label.h:507
MDL_CLASS_PERCENTAGE
Percentage of images assigned to the same class as this image.
Definition: metadata_label.h:82
MDL_CTF_BG_GAUSSIAN2_SIGMAV
CTF Background parameter.
Definition: metadata_label.h:180
MDL_AVG_CHANGES_CLASSES
Average change in offset (double pixels)
Definition: metadata_label.h:73
RLN_OPTIMISER_DO_SPLIT_RANDOM_HALVES
Definition: metadata_label.h:683
xmipp_transformation::BSPLINE4
Definition: transformations_defines.h:32
MDL_CTF_CRIT_PSDCORRELATION90
PSD correlation at 90 degrees.
Definition: metadata_label.h:188
MDL_ANGLE_PSI
Special label to be used when gathering MDs in MpiMetadataPrograms.
Definition: metadata_label.h:51
MDL_SCORE_BY_GRANULO
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:418
RLN_MLMODEL_SIGMA_OFFSET
Definition: metadata_label.h:645
MDL_DM3_NODEID
Definition: metadata_label.h:220
addIntConstant
void addIntConstant(PyObject *dict, const char *name, const long &value)
Definition: python_constants.cpp:40
MDL_CTF_BG_SQRT_K
CTF Background parameter.
Definition: metadata_label.h:173
MDL_CTF_MODEL
Name for the CTF Model (std::string)
Definition: metadata_label.h:129
MDL_SHIFT_Y_DIFF
difference in Shift along Y axis (double)
Definition: metadata_label.h:438
MDL_SERIE
A collection of micrographs, e.g. a tilt serie (std::string)
Definition: metadata_label.h:430
RLN_IMAGE_ENABLED
Definition: metadata_label.h:551
MDL_NOISE_COORD
Definition: metadata_label.h:321
MDL_DATATYPE
if read from file original image datatype, this is an struct defined in image
Definition: metadata_label.h:213
MDL_NOISE_ANGLES
Noise description for projected angles.
Definition: metadata_label.h:319
RLN_MLMODEL_HELICAL_RISE
Definition: metadata_label.h:622
RLN_MLMODEL_MINIMUM_RADIUS_NN_INTERPOLATION
Definition: metadata_label.h:629
RLN_OPTIMISER_TAU_SPECTRUM_NAME
Definition: metadata_label.h:736
VIEW_Z_NEG
Definition: axis_view.h:34
_DATA_ALL
Definition: xmipp_image_base.h:94
RLN_CTF_DEFOCUSU
Defocus U (Angstroms)
Definition: metadata_label.h:527
MDL_ZSCORE_SHAPE2
Z Score (double)
Definition: metadata_label.h:513
MDL_WROBUST
Weight of t-student distribution in robust Maximum likelihood.
Definition: metadata_label.h:494
RLN_CTF_CA
Chromatic aberration.
Definition: metadata_label.h:531
RLN_CTF_LENS_STABILITY
Lens stability.
Definition: metadata_label.h:536
MDL_ZSCORE_DEEPLEARNING1
Z Score (double)
Definition: metadata_label.h:506
RLN_MLMODEL_DIMENSIONALITY_DATA
Definition: metadata_label.h:607
RLN_OPTIMISER_PARTICLE_DIAMETER
Definition: metadata_label.h:717
MDL_BGMEAN
<Bfactor of a map, or even a local bfactor
Definition: metadata_label.h:76
MDL_COORD_CONSENSUS_SCORE
Store a score for the coords. consensus (it will change the behavoir of the viewer) ...
Definition: metadata_label.h:89
MDL_ORIGIN_X
auxiliary label to be used as an index (long)
Definition: metadata_label.h:324
LABEL_VECTOR_DOUBLE
Definition: metadata_label.h:955
MDL_CTF_BG_GAUSSIAN_CV
CTF Background parameter.
Definition: metadata_label.h:171
MDL_NMA_MAXRANGE
Maximum value observed for a given NMA mode.
Definition: metadata_label.h:315
MDL_ZSCORE_SNR1
Z Score (double)
Definition: metadata_label.h:514
RLN_OPTIMISER_HELICAL_RISE_INITIAL
Definition: metadata_label.h:692
RLN_MLMODEL_PRIOR_MODE
Definition: metadata_label.h:643
RLN_MLMODEL_SIGMA_TILT
Definition: metadata_label.h:647
RLN_MLMODEL_TAU2_FUDGE_FACTOR
Definition: metadata_label.h:653
RLN_ORIENT_PSI_PRIOR
Definition: metadata_label.h:753
MDL_NMA_ATOMSHIFT
NMA Atom shift in Angstroms.
Definition: metadata_label.h:312
MDL_CONTINUOUS_Y
Y shift of continuous assignment.
Definition: metadata_label.h:114
transformations_defines.h
MDL_CTF_DEFOCUS_COEFS
Coefficients of the defocus adjustment plane.
Definition: metadata_label.h:139
RLN_MLMODEL_HELICAL_RISE_MIN
Definition: metadata_label.h:623
RLN_OPTIMISER_DO_SOLVENT_FLATTEN
Definition: metadata_label.h:680
RLN_PARTICLE_HELICAL_TUBE_ID
Definition: metadata_label.h:772
MDL_PSD
A Power Spectrum Density file name (std::string)
Definition: metadata_label.h:373
MDL_CTF_BG_GAUSSIAN2_K
CTF Background parameter.
Definition: metadata_label.h:178
LABEL_STRING
Definition: metadata_label.h:954
DT_HalfFloat
Definition: xmipp_datatype.h:58
MDL_CTF_BG_GAUSSIAN2_CU
CTF Background parameter.
Definition: metadata_label.h:181
MDL_SCORE_BY_PCA_RESIDUAL_PROJ
Definition: metadata_label.h:405
MDL_WEIGHT_P
Weight assigned to the image accordint to its clusterability with a significance with respect noise (...
Definition: metadata_label.h:481
MDL_CTF_CS
Spherical aberration.
Definition: metadata_label.h:152
RLN_MLMODEL_HELICAL_TWIST_MAX
Definition: metadata_label.h:620
OUTER
Definition: metadata_sql_operations.h:44
RLN_OPTIMISER_MAGNIFICATION_STEP
Definition: metadata_label.h:708
MDL_ZSCORE_SNR2
Z Score (double)
Definition: metadata_label.h:515
MDL_IMAGE_TILTED
Name of the tilted images associated to MDL_IMAGE.
Definition: metadata_label.h:252
MDL_CORRELATION_IDX
correlation value between a particle and its assigned projection
Definition: metadata_label.h:122
MDL_CTF_CRIT_FIRSTZERORATIO
First zero ratio.
Definition: metadata_label.h:189
RLN_MLMODEL_PADDING_FACTOR
Definition: metadata_label.h:636
RLN_SAMPLING_SIGMA_ROT
Definition: metadata_label.h:820
RLN_ORIENT_ORIGIN_Y_PRIOR
Definition: metadata_label.h:745
RLN_CTF_VALUE
CTF value.
Definition: metadata_label.h:544
MDL_ANGLE_Y2
Angle between y-axis and tilt-axis (double, degrees) for tilted micrographs.
Definition: metadata_label.h:67
RLN_ORIENT_ORIGIN_Z
Definition: metadata_label.h:746
RLN_SELECT_PARTICLES_ZSCORE
Definition: metadata_label.h:826
MDL_GRAPH_CC_PREVIOUS
when previous assignment validation
Definition: metadata_label.h:242
DT_Short
Definition: xmipp_datatype.h:45
MDL_CRYSTAL_LATTICE_B
< Lattice vector for projection (vector double)
Definition: metadata_label.h:103
MDL_ENABLED
Is this image enabled? (int [-1 or 1])
Definition: metadata_label.h:231
TAGLABEL_IMAGE
Definition: metadata_label.h:968
MDL_RESOLUTION_DPR
differential phase residual (double)
Definition: metadata_label.h:384
RLN_MLMODEL_PDF_CLASS
Definition: metadata_label.h:637
MDL_OPTICALFLOW_MEANY
Mean of the movement in y direction of the motion map> (double)
Definition: metadata_label.h:329
RLN_OPTIMISER_COARSE_SIZE
Definition: metadata_label.h:666
MDL_ITEM_ID
Unique identifier for items inside a list or set (std::size_t)
Definition: metadata_label.h:261
MDL_CTF_VOLTAGE
Microscope voltage (kV)
Definition: metadata_label.h:133
RLN_PERFRAME_CUMULATIVE_WEIGHT
Definition: metadata_label.h:829
RLN_OPTIMISER_LOWRES_JOIN_RANDOM_HALVES
Definition: metadata_label.h:706
MDL_CTF_BG_GAUSSIAN2_ANGLE
CTF Background parameter.
Definition: metadata_label.h:183
RLN_ORIENT_ORIGIN_X
Definition: metadata_label.h:742
MDL_CTF_CRIT_FITTINGCORR13
Correlation between the 1st and 3rd ring of the CTF.
Definition: metadata_label.h:198
AGGR_COUNT
Definition: metadata_sql_operations.h:32
RLN_POSTPROCESS_GUINIER_VALUE_WEIGHTED
Definition: metadata_label.h:803
RLN_PARTICLE_NR_FRAMES_AVG
Definition: metadata_label.h:768
RLN_MLMODEL_HELICAL_TWIST_INITIAL_STEP
Definition: metadata_label.h:621
MDL_YSIZE
Y size (int)
Definition: metadata_label.h:502
CW_ADJUST
Definition: xmipp_image_base.h:106
RLN_CTF_BFACTOR
B-factor.
Definition: metadata_label.h:523
TAGLABEL_NOTAG
Definition: metadata_label.h:964
RLN_RESOLUTION_INVPIXEL
Definition: metadata_label.h:834
MDL_CRYSTAL_SHIFTZ
Shift for the image in the Z axis (double) for crystals.
Definition: metadata_label.h:110
MDL_VOLUME_SCORE_MEAN
Score corresponding to the mean of cc with cc>threshold.
Definition: metadata_label.h:474
RLN_POSTPROCESS_GUINIER_VALUE_INTERCEPT
Definition: metadata_label.h:805
MDL_PRJ_VOL
Definition: metadata_label.h:366
RLN_MLMODEL_SIGMA_ROT
Definition: metadata_label.h:646
RLN_OPTIMISER_MAX_COARSE_SIZE
Definition: metadata_label.h:709
RLN_MLMODEL_INTERPOLATOR
Definition: metadata_label.h:627
CW_CONVERT
Definition: xmipp_image_base.h:105
RLN_POSTPROCESS_MTF_VALUE
Detector MTF value.
Definition: metadata_label.h:807
MDL_CLASS_INTERSECTION_SIZE_PVALUE
P-value (1-percentile) of the class size compared to a random distribution (double in [0...
Definition: metadata_label.h:97
MDL_IMAGE5
Image associated to this object (std::string)
Definition: metadata_label.h:259
MDL_REF2
Store a second class (int)
Definition: metadata_label.h:378
MDL_ANGLE_ROT2
Rotation angle of an image (double,degrees)
Definition: metadata_label.h:56
RLN_OPTIMISER_LOCAL_SYMMETRY_FILENAME
Definition: metadata_label.h:705
MDL_SPH_TSNE_COEFF2D
tsne coefficicient in 1D
Definition: metadata_label.h:451
MDL_MIN
Minimum value (double)
Definition: metadata_label.h:292
MDL_CTF_VPP_RADIUS
Definition: metadata_label.h:211
RLN_AREA_NAME
Name for the area (or field of view). If one does not use (tilt) series, area would be the same as mi...
Definition: metadata_label.h:520
MDL_CRYSTAL_LATTICE_A
Definition: metadata_label.h:102
RLN_MLMODEL_SSNR_REF
Definition: metadata_label.h:652
RLN_MATRIX_2_3
Definition: metadata_label.h:587
RLN_OPTIMISER_NR_ITER_WO_RESOL_GAIN
Definition: metadata_label.h:714
MDL_SCORE_BY_ALIGNABILITY_ACCURACY_REF
score by alignability references (double)
Definition: metadata_label.h:414
RLN_MATRIX_1_1
Definition: metadata_label.h:582
MDL_CTF_CRIT_FITTINGSCORE
Score of the fitting.
Definition: metadata_label.h:197
DT_Default
Definition: xmipp_datatype.h:40
MDL_CRYSTAL_SHIFTY
Shift for the image in the Y axis (double) for crystals.
Definition: metadata_label.h:109
MDL_WEIGHT_SIGNIFICANT
Weight due to Angular significance.
Definition: metadata_label.h:488
AGGR_AVG
Definition: metadata_sql_operations.h:32
MDL_NMA_SCORE
NMA Score of a given mode.
Definition: metadata_label.h:317
RLN_OPTIMISER_DATA_STARFILE
Definition: metadata_label.h:669
MDL_SHIFT_DIFF2
shift difference (double)
Definition: metadata_label.h:444
RLN_OPTIMISER_DO_SKIP_ALIGN
Definition: metadata_label.h:681
RLN_ORIENT_PSI
Definition: metadata_label.h:752
LABEL_VECTOR_SIZET
Definition: metadata_label.h:957
MDL_IMAGE_ORIGINAL
Name of an image from which MDL_IMAGE is coming from.
Definition: metadata_label.h:249
RLN_POSTPROCESS_FINAL_RESOLUTION
Definition: metadata_label.h:792
RLN_MATRIX_1_3
Definition: metadata_label.h:584
UNION_DISTINCT
Definition: metadata_sql_operations.h:38
MDL_COUNT
Number of elements of a type (int) [this is a genereic type do not use to transfer information to ano...
Definition: metadata_label.h:92
MDL_VOLUME_SCORE_MIN
Score corresponding to the min of cc with cc>threshold.
Definition: metadata_label.h:475
RLN_PARTICLE_PMAX
Definition: metadata_label.h:770
MDL_PICKING_MICROGRAPH_STATE
Micrograph state for particle picking.
Definition: metadata_label.h:347
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_ORIENTS
Definition: metadata_label.h:733
MDL_HALF2
Half map/image file name (string)
Definition: metadata_label.h:244
MDL_NMA_COLLECTIVITY
NMA Collectivity of a given mode.
Definition: metadata_label.h:311
RLN_OPTIMISER_AVAILABLE_MEMORY
Definition: metadata_label.h:661
RLN_PARTICLE_NR_FRAMES
Definition: metadata_label.h:767
RLN_IMAGE_DATATYPE
Definition: metadata_label.h:552
RLN_ORIENT_TILT
Definition: metadata_label.h:750
MDL_SELFILE
Name of an image (std::string)
Definition: metadata_label.h:429
MDL_ANGLE_PSI_DIFF
difference between psi angles (double,degrees)
Definition: metadata_label.h:54
MDL_CRYSTAL_ORTHO_PRJ
< Shift file for crystal projection
Definition: metadata_label.h:106
MDL_CRYSTAL_PROJ
<Orthogonal projection or not (bool)
Definition: metadata_label.h:107
MDL_FIRST_LABEL
The label MDL_OBJID is special and should not be used.
Definition: metadata_label.h:47
MDL_SCORE_BY_PCA_RESIDUAL
Definition: metadata_label.h:407
RLN_MICROGRAPH_ID
Definition: metadata_label.h:592
MDL_CTF_Q0
Inelastic absorption.
Definition: metadata_label.h:162
MDL_RESOLUTION_FREQ2
Frequency in 1/A squared (double)
Definition: metadata_label.h:389
MDL_CTF_CRIT_PSDRADIALINTEGRAL
Integral of the radial PSD.
Definition: metadata_label.h:196
MDL_OPTICALFLOW_STDY
Standard deviation of the movement in y direction of the motion map> (double)
Definition: metadata_label.h:331
MDL_SAMPLINGRATE_ORIGINAL
original sampling rate in A/pixel (double)
Definition: metadata_label.h:399
EQ
Equal.
Definition: metadata_query.h:90
MDL_WEIGHT_JUMPER2
Weight due to angular jumping.
Definition: metadata_label.h:485
MDL_VOLUME_SCORE_SUM_TH
< Score corresponding to the sum of cc with cc>threshold
Definition: metadata_label.h:473
MDL_CTF_BG_SQRT_U
CTF Background parameter.
Definition: metadata_label.h:174
MDL_SPH_DEFORMATION
Deformation in voxels.
Definition: metadata_label.h:449
RLN_CTF_DEFOCUS_ANGLE
Defocus angle (degrees)
Definition: metadata_label.h:529
MDL_CONTINUOUS_GRAY_A
a value of continuous assignment
Definition: metadata_label.h:116
MDL_CTF_CRIT_DAMPING
Minimum damping at border.
Definition: metadata_label.h:195
MDL_ORIGIN_Y
Origin for the image in the Y axis (double)
Definition: metadata_label.h:325
MDL_CTF_LONGITUDINAL_DISPLACEMENT
Longitudinal displacement.
Definition: metadata_label.h:160
MDL_RESOLUTION_FREQREAL
Frequency in A (double)
Definition: metadata_label.h:390
RLN_OPTIMISER_SGD_SIGMA2FUDGE_HALFLIFE
Definition: metadata_label.h:725
RLN_MLMODEL_NORM_CORRECTION_AVG
Definition: metadata_label.h:630
DT_CInt
Definition: xmipp_datatype.h:53
MDL_YCOOR_TILT
Y component in tilted micrograph (int)
Definition: metadata_label.h:501
RLN_MATRIX_1_2
Definition: metadata_label.h:583
MDL_CRYSTAL_SHIFTX
< Have a crystal projection (bool)
Definition: metadata_label.h:108
MDL_FRAME_ID
Unique id of frame inside a Movie.
Definition: metadata_label.h:238
RLN_POSTPROCESS_GUINIER_VALUE_SHARPENED
Definition: metadata_label.h:804
MDL_CTF_GROUP
group images by defocus
Definition: metadata_label.h:154
MDL_DEFGROUP
Defocus group.
Definition: metadata_label.h:214
_NONE
Definition: xmipp_image_base.h:90
MDL_COST
Cost for the image (double)
Definition: metadata_label.h:90
DT_CShort
Definition: xmipp_datatype.h:52
MDL_NMA_EIGENVAL
NMA Eigenvalue of a given mode.
Definition: metadata_label.h:318
DT_Unknown
Definition: xmipp_datatype.h:41
RLN_OPTIMISER_SGD_MAX_SUBSETS
Definition: metadata_label.h:729
RLN_ORIENT_ROT
Definition: metadata_label.h:748
MDL_CTF_DEFOCUSA
average defocus (Angtroms)
Definition: metadata_label.h:134
MDL_SUBTRACTION_R2
R2 coefficient of subtracted particle.
Definition: metadata_label.h:454
RLN_IMAGE_SIZEY
Definition: metadata_label.h:570
MDL_SCORE_BY_GINI
< Particle variance (double)
Definition: metadata_label.h:426
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_OFFSETS
Definition: metadata_label.h:732
RLN_OPTIMISER_FIX_TAU
Definition: metadata_label.h:687
VIEW_X_NEG
Definition: axis_view.h:38
RLN_PARTICLE_AUTOPICK_FOM
Definition: metadata_label.h:756
RLN_OPTIMISER_DO_SKIP_ROTATE
Definition: metadata_label.h:682
RLN_POSTPROCESS_FSC_TRUE
Definition: metadata_label.h:794
MDL_VOLUME_SCORE4
< Score 3 for volumes
Definition: metadata_label.h:479
WHITE
Definition: xmipp_color.h:51
MDL_SCORE_BY_SCREENING
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:423
CYAN
Definition: xmipp_color.h:50
RLN_POSTPROCESS_FSC_MASKED
Definition: metadata_label.h:795
RLN_OPTIMISER_HELICAL_TUBE_INNER_DIAMETER
Definition: metadata_label.h:694
MDL_ANGLE_Y
Angle between y-axis and tilt-axis (double, degrees) for untilted micrographs.
Definition: metadata_label.h:66
MDL_PICKING_STATE
State for particle picking.
Definition: metadata_label.h:346
MDL_PICKING_MANUALPARTICLES_SIZE
Number of manual particles picked.
Definition: metadata_label.h:351
RLN_CTF_CONVERGENCE_CONE
Convergence cone.
Definition: metadata_label.h:539
RLN_MICROGRAPH_TILT_AXIS_DIRECTION
Definition: metadata_label.h:597
XMIPP_EQUAL_ACCURACY
#define XMIPP_EQUAL_ACCURACY
Definition: xmipp_macros.h:119
MDL_XCOOR
X component (int)
Definition: metadata_label.h:496
INNER_JOIN
Definition: metadata_sql_operations.h:38
MDL_FLIP
Flip the image? (bool)
Definition: metadata_label.h:236
RLN_IMAGE_DIMENSIONALITY
Definition: metadata_label.h:553
MDL_TOMOGRAMMD
Name for a Metadata file (std::string)
Definition: metadata_label.h:461
MD_OVERWRITE
Definition: metadata_writemode.h:33
BLACK
Definition: xmipp_color.h:44
RLN_OPTIMISER_SGD_WRITE_EVERY_SUBSET
Definition: metadata_label.h:728
MDL_MICROGRAPH_MOVIE
Name of a movie (std::string)
Definition: metadata_label.h:286
MDL_DM3_SIZE
Definition: metadata_label.h:225
MDL_CTF_CRIT_NORMALITY
Normality test between histogram of micrography and gaussian distribution.
Definition: metadata_label.h:202
MDL_LAST_LABEL
Definition: metadata_label.h:939
RLN_OPTIMISER_HAS_CONVERGED
Definition: metadata_label.h:688
RLN_SAMPLING_PERTURB
Definition: metadata_label.h:816
TAGLABEL_CTFPARAM
Definition: metadata_label.h:967
RLN_OPTIMISER_DO_CORRECT_NORM
Definition: metadata_label.h:674
GE
Greater equal.
Definition: metadata_query.h:94
RLN_IMAGE_ID
Definition: metadata_label.h:550
MDL_CLASSIFICATION_DATA_SIZE
Size of data vectors for classification (int)
Definition: metadata_label.h:84
MDL_MLF_SIGNAL
MLF signal (double)
Definition: metadata_label.h:303
MDL_PRJ_DIMENSIONS
< Number of non-redundant projections directions (size_t)
Definition: metadata_label.h:355
RLN_PARTICLE_FOM
Definition: metadata_label.h:760
RLN_ORIENT_ORIGIN_Y
Definition: metadata_label.h:744
RLN_OPTIMISER_HELICAL_Z_PERCENTAGE
Definition: metadata_label.h:693
MDL_MICROGRAPH_MOVIE_ID
Unique identifier of a movie.
Definition: metadata_label.h:287
MDL_CTF_BG_GAUSSIAN_SIGMAU
CTF Background parameter.
Definition: metadata_label.h:168
RLN_CTF_PHASESHIFT
Phase-shift from a phase-plate (in degrees)
Definition: metadata_label.h:546
MDL_PMAX
Maximum value of normalized probability function (now called "Pmax/sumP") (double) ...
Definition: metadata_label.h:352
MDL_COUNT2
Number of elements of a type (int) [this is a genereic type do not use to transfer information to ano...
Definition: metadata_label.h:93
MDL_CTF_BG_SQRT_ANGLE
CTF Background parameter.
Definition: metadata_label.h:176
RLN_OPTIMISER_CHANGES_OPTIMAL_CLASSES
Definition: metadata_label.h:665
MDL_SPH_TSNE_COEFF1D
Definition: metadata_label.h:450
MDL_IMAGE2
Image associated to this object (std::string)
Definition: metadata_label.h:256
MDL_SUMWEIGHT
Sum of all weights in ML model.
Definition: metadata_label.h:458
RLN_OPTIMISER_OUTPUT_ROOTNAME
Definition: metadata_label.h:716
MDL_NMA
Normal mode displacements (vector double)
Definition: metadata_label.h:310
MDL_CTF_CRIT_MAXFREQ
Maximum frequency at which the envelope drops below 0.1 (in Angstroms)
Definition: metadata_label.h:194
RLN_CTF_ENERGY_LOSS
Energy loss.
Definition: metadata_label.h:533
MDL_SCORE_BY_VAR
Definition: metadata_label.h:425
MDL_SIGMANOISE
Standard deviation of the noise in ML model.
Definition: metadata_label.h:445
MDL_HALF1
Half map/image 1 file name (string)
Definition: metadata_label.h:243
DT_Float
Definition: xmipp_datatype.h:50
GREEN
Definition: xmipp_color.h:46
RLN_ORIENT_ORIGIN_Z_PRIOR
Definition: metadata_label.h:747
RLN_ORIENT_ROT_PRIOR
Definition: metadata_label.h:749
MDL_DIMRED
Projection onto a reduced manifold (vector double)
Definition: metadata_label.h:215
xmipp_random_mode.h
RLN_OPTIMISER_INCR_SIZE
Definition: metadata_label.h:703
MDL_AVGPMAX
Average change in class assignment(double dimensionaless)
Definition: metadata_label.h:74
MDL_WEIGHT_PHASECORR
Weight due phase correlation between two images/subtomos.
Definition: metadata_label.h:487
RLN_OPTIMISER_DO_MAP
Definition: metadata_label.h:678
GT
Greater than.
Definition: metadata_query.h:92
RLN_PARTICLE_KL_DIVERGENCE
Definition: metadata_label.h:761
INNER
Definition: metadata_sql_operations.h:44
MDL_IMAGE_RESIDUAL
Name of a residual image associated to this image.
Definition: metadata_label.h:251
MDL_NOISE_PIXEL_LEVEL
Noise description for pixels&#39; gray level (when projecting)
Definition: metadata_label.h:322
MDL_IMAGE1
Image associated to this object (std::string)
Definition: metadata_label.h:255
MDL_INTSCALE
Intensity scale for an image.
Definition: metadata_label.h:260
MDL_CLASSIFICATION_FRC_05
Digital frequency at which the FRC drops below 0.5 (double)
Definition: metadata_label.h:87
MDL_ZSCORE_HISTOGRAM
Z Score (double)
Definition: metadata_label.h:508
MDL_MAXCC
Maximum cross-correlation for the image (double)
Definition: metadata_label.h:280
MDL_MICROGRAPH_ID
Micrograph unique id for reference (MDL_ITEM_ID should be used for Micrographs list) ...
Definition: metadata_label.h:285
TAGLABEL_MICROGRAPH
Definition: metadata_label.h:971
RLN_ORIENT_PSI_PRIOR_FLIP_RATIO
Definition: metadata_label.h:754
RLN_OPTIMISER_DO_CORRECT_MAGNIFICATION
Definition: metadata_label.h:673
MDL_MASK
Name of a mask associated to image.
Definition: metadata_label.h:279
MDL_CTF_DEFOCUS_R2
Defocus coefficient of determination.
Definition: metadata_label.h:138
MDL_CTF_BG_SQRT_V
CTF Background parameter.
Definition: metadata_label.h:175
xmipp_color.h
RLN_PARTICLE_ORI_NAME
Definition: metadata_label.h:765
MDL_MODELFRAC
Model fraction (alpha_k) for a Maximum Likelihood model.
Definition: metadata_label.h:306
MDL_MISSINGREGION_NR
Number of missing region in subtomogram.
Definition: metadata_label.h:294
MDL_SCALE
scaling factor for an image or volume (double)
Definition: metadata_label.h:404
INTERSECTION
Definition: metadata_sql_operations.h:38
MDL_ZSCORE_RESMEAN
Z Score of the mean of the residuals (double)
Definition: metadata_label.h:509
RLN_MLMODEL_CURRENT_RESOLUTION
Definition: metadata_label.h:603
MDL_TIME
Definition: metadata_label.h:234
RLN_CTF_IMAGE
name of an image describing the CTF model
Definition: metadata_label.h:535
MDL_MICROGRAPH
Name of a micrograph (std::string)
Definition: metadata_label.h:284
RLN_OPTIMISER_BEST_RESOL_THUS_FAR
Definition: metadata_label.h:662
RLN_MLMODEL_ORIENTABILITY_CONTRIBUTION
Definition: metadata_label.h:635
RLN_IMAGE_SAMPLINGRATE
Definition: metadata_label.h:564
RLN_MLMODEL_HELICAL_TWIST
Definition: metadata_label.h:618
MDL_DM3_IDTAG
Definition: metadata_label.h:219
MDL_CTF_PHASE_SHIFT
Definition: metadata_label.h:210
RLN_MATRIX_2_1
Definition: metadata_label.h:585
MDL_SCORE_BY_ALIGNABILITY_ACCURACY_EXP
score by alignability experimental particles (double)
Definition: metadata_label.h:413
RLN_MLMODEL_SIGMA2_NOISE
Definition: metadata_label.h:650
MDL_PRJ_PSI_RANDSTR
< Psi angle dev and mean noise (vector double)
Definition: metadata_label.h:358
MDL_KSTEST
KS-test statistics.
Definition: metadata_label.h:268
RLN_SORTED_IDX
Definition: metadata_label.h:827
RLN_POSTPROCESS_GUINIER_FIT_INTERCEPT
Definition: metadata_label.h:799
MDL_CUMULATIVE_SSNR
Cumulative SSNR (double)
Definition: metadata_label.h:212
MDL_IMAGE4
Image associated to this object (std::string)
Definition: metadata_label.h:258
MDL_CTF_CRIT_FIRSTZERODISAGREEMENT
First zero disagreement with second model (in Angstroms)
Definition: metadata_label.h:193
MDL_ANGLE_PSI2
Psi angle of an image (double,degrees)
Definition: metadata_label.h:52
MDL_CTF_CRIT_PSDPCARUNSTEST
Runs test on the projection of the PSD on the first principal component.
Definition: metadata_label.h:201
MDL_CTF_BG_GAUSSIAN_CU
CTF_ CTF Background parameter.
Definition: metadata_label.h:170
RLN_SAMPLING_SIGMA_TILT
Definition: metadata_label.h:821
MDL_XCOOR_TILT
X component in tilted micrograph (int)
Definition: metadata_label.h:497
CW_LAST_LABEL
Definition: xmipp_image_base.h:107
RLN_ORIENT_ORIGIN_X_PRIOR
Definition: metadata_label.h:743
MDL_SIGMAOFFSET
Standard deviation of the offsets in ML model.
Definition: metadata_label.h:446
RLN_OPTIMISER_WIDTH_MASK_EDGE
Definition: metadata_label.h:738
RLN_MICROGRAPH_NAME
Definition: metadata_label.h:594
MDL_MISSINGREGION_TYPE
Type of missing region in subtomogram.
Definition: metadata_label.h:295
RLN_MLMODEL_AVE_PMAX
Definition: metadata_label.h:602
MDL_SCORE_BY_ZSCORE
Definition: metadata_label.h:428
LABEL_NOTYPE
Definition: metadata_label.h:950
MDL_ZCOOR
Z component (int)
Definition: metadata_label.h:504
RLN_POSTPROCESS_FSC_UNMASKED
Definition: metadata_label.h:796
MDL_REF3D
3D Class to which the image belongs (int)
Definition: metadata_label.h:376
MDL_RESOLUTION_FREQ
Frequency in 1/A (double)
Definition: metadata_label.h:388
MDL_ANGLE_DIFF
difference between two angles (double,degrees)
Definition: metadata_label.h:64
MDL_PARTICLE_ID
Particle unique identifier for reference. (The MDL_ITEM_ID should be used when particle list) ...
Definition: metadata_label.h:333
MDL_WEIGHT_SSNR
Weight due to SSNR.
Definition: metadata_label.h:489
RLN_MLMODEL_ACCURACY_TRANS
Definition: metadata_label.h:601
DATA
Definition: xmipp_image_base.h:93
RED
Definition: xmipp_color.h:45
MDL_OPTICALFLOW_STDX
Standatd deviation of the movement in x direction of the motion map> (double)
Definition: metadata_label.h:330
RLN_IMAGE_BEAMTILT_Y
Definition: metadata_label.h:555
MDL_MAXCC_PREVIOUS
Correlation from previous alignment.
Definition: metadata_label.h:283
RLN_MATRIX_3_2
Definition: metadata_label.h:589
MDL_IMAGE_COVARIANCE
Name of the covariance imagee associated to this image.
Definition: metadata_label.h:247
RLN_SAMPLING_SYMMETRY
Definition: metadata_label.h:823
MDL_CTF_DOWNSAMPLE_PERFORMED
Downsampling performed to estimate the CTF.
Definition: metadata_label.h:204
MDL_USER
Definition: metadata_label.h:369
RLN_MLMODEL_GROUP_SCALE_CORRECTION
Definition: metadata_label.h:616
RLN_CTF_DETECTOR_PIXEL_SIZE
Pixel size for detector as used in CTF-determination.
Definition: metadata_label.h:532
ADD_CONST2
#define ADD_CONST2(name, label)
Definition: python_constants.cpp:50
MDL_CTF_BG_GAUSSIAN2_CV
CTF Background parameter.
Definition: metadata_label.h:182
RLN_OPTIMISER_ACCURACY_TRANS
Definition: metadata_label.h:657
RLN_OPTIMISER_FIX_SIGMA_OFFSET
Definition: metadata_label.h:686
MDL_UNDEFINED
Definition: metadata_label.h:46
RLN_PARTICLE_NAME
Definition: metadata_label.h:764
VIEW_Y_NEG
Definition: axis_view.h:36
metadata_writemode.h
RLN_IMAGE_WEIGHT
Definition: metadata_label.h:578
MDL_SCORE_BY_ALIGNABILITY_NOISE
score by alignability noise (double)
Definition: metadata_label.h:415
MDL_PSD_ENHANCED
A enhanced Power Spectrum Density file name (std::string)
Definition: metadata_label.h:374
MDL_SUBTRACTION_BETA0
Beta 0 coefficient of adjusted model for subtract particle.
Definition: metadata_label.h:455
MDL_REF
Class to which the image belongs (int)
Definition: metadata_label.h:377
RLN_SAMPLING_HEALPIX_ORDER
Definition: metadata_label.h:811
MDL_SAMPLINGRATE
rfactor
Definition: metadata_label.h:398
DT_CFloat
Definition: xmipp_datatype.h:54
RLN_OPTIMISER_HELICAL_TWIST_INITIAL
Definition: metadata_label.h:691
RLN_MLMODEL_GROUP_NR_PARTICLES
Definition: metadata_label.h:615
MDL_CTF_DEFOCUS_RESIDUAL
Difference between the observed defocus value and the estimated defocus value.
Definition: metadata_label.h:140
LABEL_BOOL
Definition: metadata_label.h:952
MDL_CTF_CRIT_PSDPCA1VARIANCE
Variance in the first principal component of the PSDs.
Definition: metadata_label.h:200
VIEW_Y_POS
Definition: axis_view.h:37
MDL_WEIGHT_CONTINUOUS2
Weight due to angular continuous assignment.
Definition: metadata_label.h:482
RLN_MLMODEL_GROUP_NO
Definition: metadata_label.h:614
MDL_NEIGHBORS
Vector of indexes to points some "neighbors".
Definition: metadata_label.h:307
MDL_SHIFT_X2
Shift for the image in the X axis (double)
Definition: metadata_label.h:432
RLN_MLMODEL_FSC_HALVES_REF
Definition: metadata_label.h:612
RLN_POSTPROCESS_GUINIER_FIT_CORRELATION
Definition: metadata_label.h:798
RLN_IMAGE_BEAMTILT_GROUP
Definition: metadata_label.h:556
RLN_MLMODEL_FOURIER_COVERAGE_TOTAL_REF
Definition: metadata_label.h:611
VIEW_Z_POS
Definition: axis_view.h:35
RLN_CTF_FOM
ctffind3 FOM (CC) for quality of CTF-fit
Definition: metadata_label.h:534
LABEL_SIZET
Definition: metadata_label.h:956
RLN_MLMODEL_NR_GROUPS
Definition: metadata_label.h:633
RLN_PARTICLE_MOVIE_RUNNING_AVG
Definition: metadata_label.h:762
RLN_MLMODEL_CURRENT_SIZE
Definition: metadata_label.h:604
AGGR_MAX
Definition: metadata_sql_operations.h:32
MDL_CONTINUOUS_GRAY_B
b value of continuous assignment
Definition: metadata_label.h:117
MDL_XSIZE
X size (int)
Definition: metadata_label.h:498
DT_Bool
Definition: xmipp_datatype.h:56
MDL_ZSCORE
Global Z Score (double)
Definition: metadata_label.h:505
RLN_POSTPROCESS_FSC_RANDOM_MASKED
Definition: metadata_label.h:797
MDL_CLASS_COUNT
Number of images assigned to the same class as this image.
Definition: metadata_label.h:81
MDL_CRYSTAL_DISAPPEAR_THRE
< Lattice vector for projection (vector double)
Definition: metadata_label.h:104
MDL_IMGMD
Name of Metadata file for all images (string)
Definition: metadata_label.h:254
RLN_OPTIMISER_RADIUS_MASK_EXP_PARTICLES
Definition: metadata_label.h:719
RLN_POSTPROCESS_GUINIER_VALUE_IN
Definition: metadata_label.h:801
RLN_IMAGE_NORM_CORRECTION
Definition: metadata_label.h:562
RLN_OPTIMISER_SGD_STEPSIZE
Definition: metadata_label.h:730
RLN_PERFRAME_RELATIVE_WEIGHT
Definition: metadata_label.h:830
MDL_SCORE_BY_EMPTINESS
Small values represent worse particles. Much larger than 1 for good particles.
Definition: metadata_label.h:416
MDL_CTF_MODEL2
Name for another CTF model (std::string)
Definition: metadata_label.h:130
MDL_SCORE_BY_MIRROR
score by mirror (double)
Definition: metadata_label.h:421
UNION
Definition: metadata_sql_operations.h:38
MDL_Y
Y component (double)
Definition: metadata_label.h:499
DT_UInt
Definition: xmipp_datatype.h:46
MDL_OPTICALFLOW_MEANX
Mean of the movement in x direction of the motion map> (double)
Definition: metadata_label.h:328
RLN_AREA_ID
ID for the area (or field of view). If one does not use (tilt) series, area would be the same as micr...
Definition: metadata_label.h:519
OUTER_JOIN
Definition: metadata_sql_operations.h:38
MDL_MLF_CTF
MLF CTF estimated value (double)
Definition: metadata_label.h:301
RLN_POSTPROCESS_GUINIER_VALUE_INVMTF
Definition: metadata_label.h:802
MDL_CTF_CRIT_ICENESS
Iceness of the micrograph.
Definition: metadata_label.h:203
_HEADER_ALL
Definition: xmipp_image_base.h:92
MDL_RESOLUTION_ERRORL2
Error in l2 (double)
Definition: metadata_label.h:385
RLN_OPTIMISER_DO_REALIGN_MOVIES
Definition: metadata_label.h:677
RLN_IMAGE_SIZEX
Definition: metadata_label.h:569
MDL_RESOLUTION_FRCRANDOMNOISE
Fourier shell correlation noise (double)
Definition: metadata_label.h:387
RLN_MLMODEL_ESTIM_RESOL_REF
Definition: metadata_label.h:609
MDL_MAXCC_PERCENTILE
Percentile of the maximum cross-correlation for the image (double)
Definition: metadata_label.h:281
MDL_SPH_COEFFICIENTS
Deformation coefficients.
Definition: metadata_label.h:448
ALL_IMAGES
#define ALL_IMAGES
Definition: xmipp_image_macros.h:37
MDL_MICROGRAPH_TILTED
Name of the corresponding tilted micrograph (std::string)
Definition: metadata_label.h:290
MDL_CLASSIFICATION_DATA
Data vector for classification (vector double)
Definition: metadata_label.h:83
RLN_MLMODEL_SIGMA2_REF
Definition: metadata_label.h:651
MDL_VOLUME_SCORE1
Definition: metadata_label.h:476
MDL_TRANSFORM_MATRIX
transformation matrix in numpy string format or space separated (std::string)
Definition: metadata_label.h:462
RLN_IMAGE_NAME
Definition: metadata_label.h:548
RLN_OPTIMISER_IGNORE_HELICAL_SYMMETRY
Definition: metadata_label.h:699
RLN_MATRIX_3_1
Definition: metadata_label.h:588
MDL_FOM
Figure of Merit in 0-1 range (double)
Definition: metadata_label.h:237
MDL_SHIFT_Z
Shift for the image in the Z axis (double)
Definition: metadata_label.h:439
RLN_ORIENT_FLIP
Definition: metadata_label.h:740
RLN_OPTIMISER_DO_ZERO_MASK
Definition: metadata_label.h:684
RLN_MLMODEL_PRIOR_OFFX_CLASS
Definition: metadata_label.h:638
MDL_AVG_CHANGES_OFFSETS
Average change in angular orientation (double degrees)
Definition: metadata_label.h:72
RLN_OPTIMISER_DO_CORRECT_SCALE
Definition: metadata_label.h:675
MDL_X
X component (double)
Definition: metadata_label.h:495
LEFT
Definition: metadata_sql_operations.h:44
RLN_MLMODEL_FOURIER_COVERAGE_REF
Definition: metadata_label.h:610
MDL_LOCAL_AVERAGE
average value in the micrograph (double)
Definition: metadata_label.h:276
MDL_IDX
Index within a list (size_t)
Definition: metadata_label.h:245
MDL_MISSINGREGION_THYF
Final tilt angle in Y for missing region in subtomogram.
Definition: metadata_label.h:297
FILENAMENUMBERLENGTH
#define FILENAMENUMBERLENGTH
Definition: xmipp_filename.h:39
MDL_ANGLE_TEMPERATURE
Angular temperature (double,degrees)
Definition: metadata_label.h:68
MDL_CLASS_INTERSECTION_RELATIVE_SIZE_PVALUE
P-value (1-percentile) of the relative class size (size/max(original_classes)) compared to a random d...
Definition: metadata_label.h:98
MDL_CTF_BG_BASELINE
CTF Background parameter.
Definition: metadata_label.h:177
DT_Double
Definition: xmipp_datatype.h:51
MDL_DIMENSIONS_3D
Definition: metadata_label.h:371
MDL_DM3_TAGNAME
Definition: metadata_label.h:224
MDL_ANGLE_DIFF2
difference between two angles (double,degrees)
Definition: metadata_label.h:65
RLN_OPTIMISER_NR_ITERATIONS
Definition: metadata_label.h:713
axis_view.h
MDL_PROGRAM
Definition: metadata_label.h:368
RLN_IMAGE_SIZEZ
Definition: metadata_label.h:571
RLN_MLMODEL_PDF_ORIENT
Definition: metadata_label.h:640
MDL_PICKING_AUTOPICKPERCENT
Definition: metadata_label.h:348
RLN_SAMPLING_IS_3D
Definition: metadata_label.h:809
MDL_WEIGHT_PRECISION_MIRROR
Weight due to Mirror Precision.
Definition: metadata_label.h:493
MDL_PRJ_ROT_RANGE
< Type of randomness for Rotational (std::string)
Definition: metadata_label.h:362
MDL_WEIGHT_ACCURACY_ALIGNABILITY
Weight due to Alignability Accuracy.
Definition: metadata_label.h:492
MDL_VOLUME_SCORE2
< Score 1 for volumes
Definition: metadata_label.h:477
MDL_DM3_PARENTID
Definition: metadata_label.h:222
MDL_CONTINUOUS_SCALE_X
scale x of continuous assignment
Definition: metadata_label.h:119
MDL_CORR_DENOISED_NOISY
Correlation between the denoised image and the noisy version.
Definition: metadata_label.h:95
RLN_OPTIMISER_SOLVENT_MASK2_NAME
Definition: metadata_label.h:735
MDL_ORIGIN_Z
Origin for the image in the Z axis (double)
Definition: metadata_label.h:326
MDL_AVG
average value (double)
Definition: metadata_label.h:70
RLN_MLMODEL_SGD_GRADIENT_IMAGE
Definition: metadata_label.h:644
MDL_PRJ_TILT_NOISE
Definition: metadata_label.h:363
RLN_OPTIMISER_DO_AUTO_REFINE
Definition: metadata_label.h:670
MDL_ANGLE_TILT_DIFF
difference between tilt angles (double,degrees)
Definition: metadata_label.h:62
RLN_MICROGRAPH_TILT_AXIS_OUTOFPLANE
Definition: metadata_label.h:598
MDL_CTF_ENERGY_LOSS
Energy loss.
Definition: metadata_label.h:155
MDL_CLASSIFICATION_INTRACLASS_DISTANCE
Average intraclass distance (double)
Definition: metadata_label.h:86
RLN_OPTIMISER_AUTO_LOCAL_HP_ORDER
Definition: metadata_label.h:660
LABEL_DOUBLE
Definition: metadata_label.h:953
RLN_SELECTED
Definition: metadata_label.h:825
MDL_SCORE_BY_ALIGNABILITY
score by alignability (double)
Definition: metadata_label.h:408
MDL_YCOOR
Y component (int)
Definition: metadata_label.h:500
LE
Less equal.
Definition: metadata_query.h:95
MDL_CTF_DEFOCUS_CHANGE
Defocus change with respect to previous defoucs (Angstroms)
Definition: metadata_label.h:137
MDL_ZSCORE_RESVAR
Z Score of the stddev of the residuals (double)
Definition: metadata_label.h:510
MDL_MISSINGREGION_THXF
Final tilt angle in X for missing region in subtomogram.
Definition: metadata_label.h:299
RLN_IMAGE_COORD_X
Definition: metadata_label.h:557
MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_DIFF_RATIO
Ratio sigma(firstMinimum-firstZero)/sigma(firstZero)
Definition: metadata_label.h:191
MDL_MIRRORFRAC
Mirror fraction for a Maximum Likelihood model.
Definition: metadata_label.h:293
RLN_MLMODEL_DIMENSIONALITY
Definition: metadata_label.h:606
RLN_MLMODEL_PRIOR_OFFY_CLASS
Definition: metadata_label.h:639
RLN_MLMODEL_ORIGINAL_SIZE
Definition: metadata_label.h:634
MDL_GRAPH_DISTANCE2MAX_PREVIOUS
when previous assignment validation
Definition: metadata_label.h:240
MDL_WEIGHT_JUMPER0
Weight due to angular jumping.
Definition: metadata_label.h:483
RLN_IMAGE_SAMPLINGRATE_Z
Definition: metadata_label.h:567
MDL_NMA_MINRANGE
Minimum value observed for a given NMA mode.
Definition: metadata_label.h:314
MDL_SHIFT_Y
Shift for the image in the Y axis (double)
Definition: metadata_label.h:435
RLN_OPTIMISER_HIGHRES_LIMIT_SGD
Definition: metadata_label.h:698
DT_Long
Definition: xmipp_datatype.h:49
MDL_NEIGHBORHOOD_RADIUS
Radius of the neighborhood (radians)
Definition: metadata_label.h:309
MDL_BFACTOR
Definition: metadata_label.h:75
DT_UChar
Definition: xmipp_datatype.h:42
RND_GAUSSIAN
Definition: xmipp_random_mode.h:35
MDL_ZSCORE_RESCOV
Z Score of the covariance matrix of the residuals (double)
Definition: metadata_label.h:511
RLN_COMMENT
Definition: metadata_label.h:521
MDL_CRYSTAL_SHFILE
< Disappearing threshold (double)
Definition: metadata_label.h:105
RLN_CTF_TRANSVERSAL_DISPLACEMENT
Transversal displacemente.
Definition: metadata_label.h:541
RLN_OPTIMISER_HAS_HIGH_FSC_AT_LIMIT
Definition: metadata_label.h:689
MDL_SHIFT_DIFF
shift difference (double)
Definition: metadata_label.h:443
MDL_DM3_TAGCLASS
Definition: metadata_label.h:223
RLN_OPTIMISER_ADAPTIVE_OVERSAMPLING
Definition: metadata_label.h:659
RLN_PARTICLE_NR_SIGNIFICANT_SAMPLES
Definition: metadata_label.h:766
RLN_MLMODEL_ACCURACY_ROT
Definition: metadata_label.h:600
MDL_PRJ_ROT_NOISE
< Psi angle range (vector double)
Definition: metadata_label.h:360
MDL_ITER
Current iteration number (int)
Definition: metadata_label.h:262
RLN_POSTPROCESS_BFACTOR
Definition: metadata_label.h:789
RLN_CTF_CS
Spherical aberration.
Definition: metadata_label.h:530
MDL_PRJ_TILT_RANDSTR
< Tilt angle dev and mean noise (vector double)
Definition: metadata_label.h:364
xmipp_datatype.h
DT_Int
Definition: xmipp_datatype.h:47
MDL_CTF_DEFOCUSV
Defocus V (Angstroms)
Definition: metadata_label.h:136
DT_SChar
Definition: xmipp_datatype.h:43
RLN_RESOLUTION_ANGSTROM
Definition: metadata_label.h:833
MDL_CTF_CA
Chromatic aberration.
Definition: metadata_label.h:153
MDL_CTF_TRANSVERSAL_DISPLACEMENT
Transversal displacemente.
Definition: metadata_label.h:161
RLN_MLMODEL_PIXEL_SIZE
Definition: metadata_label.h:641
MDL_MLF_WIENER
MLF Wiener filter (double)
Definition: metadata_label.h:302
MDL_GRAPH_CC
Correlation between assigned direction and graph filtered maximum.
Definition: metadata_label.h:241
RLN_OPTIMISER_REFS_ARE_CTF_CORRECTED
Definition: metadata_label.h:721
MDL_NMA_MODEFILE
File with an NMA mode.
Definition: metadata_label.h:316
xmipp_macros.h
DT_UShort
Definition: xmipp_datatype.h:44
TAGLABEL_VOLUME
Definition: metadata_label.h:969
DT_CDouble
Definition: xmipp_datatype.h:55
RLN_OPTIMISER_ACCURACY_ROT
Definition: metadata_label.h:656
RLN_OPTIMISER_DO_ONLY_FLIP_CTF_PHASES
Definition: metadata_label.h:671
RLN_IMAGE_SAMPLINGRATE_Y
Definition: metadata_label.h:566
MDL_IMAGE
Name of an image (std::string)
Definition: metadata_label.h:246
RLN_MLMODEL_DATA_VS_PRIOR_REF
Definition: metadata_label.h:605
MDL_CTF_LENS_STABILITY
Lens stability.
Definition: metadata_label.h:158
RLN_CTF_MAGNIFICATION
Magnification used for CTF-determination.
Definition: metadata_label.h:537
RLN_RESOLUTION
Definition: metadata_label.h:832
MDL_DATE
Definition: metadata_label.h:233
MAGENTA
Definition: xmipp_color.h:49
RLN_IMAGE_STATS_MAX
Definition: metadata_label.h:573
RLN_OPTIMISER_DO_HELICAL_REFINE
Definition: metadata_label.h:676
MDL_PRJ_PSI_RANGE
< Type of randomness for Psi (std::string)
Definition: metadata_label.h:359
RLN_OPTIMISER_IGNORE_CTF_UNTIL_FIRST_PEAK
Definition: metadata_label.h:702
RLN_MLMODEL_TAU2_REF
Definition: metadata_label.h:654
MDL_IMAGE_REF
Name of of the class image from which MDL_IMAGE is coming from.
Definition: metadata_label.h:250
RLN_MLMODEL_REF_IMAGE
Definition: metadata_label.h:649
TAGLABEL_METADATA
Definition: metadata_label.h:966
RLN_ORIENT_ID
Definition: metadata_label.h:741
MDL_RESOLUTION_STRUCTURE_FACTOR
Structure factor.
Definition: metadata_label.h:395
MDL_PICKING_TEMPLATES
Number of templates.
Definition: metadata_label.h:345
RLN_PARTICLE_RANDOM_SUBSET
Definition: metadata_label.h:763
MDL_COLOR
Color for particle picking.
Definition: metadata_label.h:344
MDL_DM3_NUMBER_TYPE
Definition: metadata_label.h:221
RLN_MLMODEL_SIGMA_PSI
Definition: metadata_label.h:648
RLN_PARTICLE_DLL
Definition: metadata_label.h:758
MDL_SCORE_BY_VARIANCE
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:424
MDL_MLF_NOISE
MLF Wiener filter (double)
Definition: metadata_label.h:304
RLN_IMAGE_STATS_KURT
Definition: metadata_label.h:577
MDL_SUBTRACTION_BETA1
Beta 1 coefficient of adjusted model for subtract particle.
Definition: metadata_label.h:456
MDL_WEIGHT
< Score 4 for volumes
Definition: metadata_label.h:480
MDL_CRYSTAL_CELLX
Cell location for crystals.
Definition: metadata_label.h:100
MDL_IMED
imed value between a particle and its assigned projection
Definition: metadata_label.h:253
xmipp_transformation::BSPLINE3
Definition: transformations_defines.h:32
MDL_RESOLUTION_FRC
Fourier shell correlation (double)
Definition: metadata_label.h:386
RLN_OPTIMISER_HELICAL_KEEP_TILT_PRIOR_FIXED
Definition: metadata_label.h:700
RLN_OPTIMISER_SOLVENT_MASK_NAME
Definition: metadata_label.h:734
RLN_SAMPLING_PERTURBATION_FACTOR
Definition: metadata_label.h:817
RLN_OPTIMISER_CHANGES_OPTIMAL_OFFSETS
Definition: metadata_label.h:663
MDL_CORRELATION_MASK
masked correlation value between a particle and its assigned projection inside the region with pixel ...
Definition: metadata_label.h:123
LEFT_JOIN
Definition: metadata_sql_operations.h:38
MDL_DOSE
Dose e/A^2 (double)
Definition: metadata_label.h:227
RLN_OPTIMISER_SGD_MU
Definition: metadata_label.h:723
MDL_COMMENT
Serve to make annotations on the metadata row.
Definition: metadata_label.h:88
RLN_MLMODEL_NR_BODIES
Definition: metadata_label.h:631
MDL_CLASSIFICATION_DPR_05
Differential Phase Residual evaluated at FRC=0.5.
Definition: metadata_label.h:85
MDL_SHIFT_X_DIFF
difference in Shift along X axis (double)
Definition: metadata_label.h:434
RLN_OPTIMISER_FIX_SIGMA_NOISE
Definition: metadata_label.h:685
RLN_MLMODEL_NR_CLASSES
Definition: metadata_label.h:632
MDL_STAR_COMMENT
A comment for this object /*** NOTE THIS IS A SPECIAL CASE AND SO IS TREATED ***/.
Definition: metadata_label.h:453
MDL_CTF_BG_GAUSSIAN_SIGMAV
CTF Background parameter.
Definition: metadata_label.h:169
RLN_MLMODEL_HELICAL_RISE_MAX
Definition: metadata_label.h:624
RLN_IMAGE_STATS_SKEW
Definition: metadata_label.h:576
MDL_RANDOMSEED
Seed for random number generator.
Definition: metadata_label.h:375
CW_CAST
Definition: xmipp_image_base.h:104
VIEW_X_POS
Definition: axis_view.h:39
MDL_NOISE_PARTICLE_COORD
Noise description for particle&#39;s center coordenates (when projecting)
Definition: metadata_label.h:320
RLN_SAMPLING_PRIOR_MODE
Definition: metadata_label.h:818
RLN_OPTIMISER_NR_ITER_WO_HIDDEN_VAR_CHANGES
Definition: metadata_label.h:715
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