xmipp_image_base.h File Reference

#include <memory>
#include <array>
#include "xmipp_image_macros.h"
#include "xmipp_datatype.h"
#include "metadata_row_vec.h"
#include "xmipp_array_dim.h"
#include "xmipp_filename.h"
#include "transformations_defines.h"
#include <H5Ipublic.h>
#include "rwDM3.h"
#include "rwDM4.h"
#include "rwIMAGIC.h"
#include "rwMRC.h"
#include "rwINF.h"
#include "rwRAW.h"
#include "rwSPIDER.h"
#include "rwSPE.h"
#include "rwTIA.h"
#include "rwJPEG.h"
#include "rwTIFF.h"
#include "rwEM.h"
#include "rwPIF.h"
#include "rwHDF5.h"
#include "rwEER.h"

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Classes
class	Matrix2D< T >
class	Image< T >
struct	ImageFHandler
struct	ImageInfo
struct	ApplyGeoParams
class	ImageBase
	Image base class. More...
struct	ImageBase::SPIDERhead
struct	ImageBase::TIFFDirHead
struct	ImageBase::EMHead
struct	ImageBase::PIFMainHeader
struct	ImageBase::PIFDataHeader

Macros
#define	SWAPTRIG   16776960
Images Speed-up
#define	VOLMATRIX(V)   ((V).data)
#define	IMGMATRIX(I)   ((I).data)
#define	IMGPIXEL(I, i, j)   A2D_ELEM(((I).data), (i), (j))
#define	DIRECT_IMGPIXEL(I, i, j)   DIRECT_A2D_ELEM(((I).data), (i), (j))
#define	VOLVOXEL(V, k, i, j)   A3D_ELEM(((V).data), (k), (i), (j))
#define	DIRECT_VOLVOXEL(I, k, i, j)   DIRECT_A3D_ELEM(((I).data), (k), (i), (j))

Typedefs
typedef struct tiff	TIFF

Enumerations
enum	TransformType {   NoTransform = 0, Standard = 1, Centered = 2, Hermitian = 3,   CentHerm = 4 }
enum	WriteMode {   WRITE_READONLY, WRITE_OVERWRITE, WRITE_REPLACE, WRITE_APPEND,   WRITE_LAST_LABEL, WRITE_READONLY, WRITE_OVERWRITE, WRITE_REPLACE,   WRITE_APPEND, WRITE_LAST_LABEL }
enum	DataMode {   _NONE = -2, HEADER = -1, _HEADER_ALL = 0, DATA = 1,   _DATA_ALL = 2 }
enum	CastWriteMode { CW_CAST, CW_CONVERT, CW_ADJUST, CW_LAST_LABEL }

Variables
const size_t	tiff_map_min_size = 0x12000000
const ApplyGeoParams	DefaultApplyGeoParams

Typedef Documentation

TIFF

typedef struct tiff TIFF

Definition at line 46 of file xmipp_image_base.h.

Variable Documentation

tiff_map_min_size

const size_t tiff_map_min_size = 0x12000000

Definition at line 53 of file xmipp_image_base.h.