Xmipp  v3.23.11-Nereus
metadata_static.h
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1 /***************************************************************************
2  *
3  * Authors: J.M. De la Rosa Trevin (jmdelarosa@cnb.csic.es)
4  *
5  * Unidad de Bioinformatica of Centro Nacional de Biotecnologia , CSIC
6  *
7  * This program is free software; you can redistribute it and/or modify
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25 
26 #ifndef CORE_METADATA_STATIC_H
27 #define CORE_METADATA_STATIC_H
28 
29 #include "metadata_label.h"
30 #include "metadata_row_sql.h"
31 #include "metadata_row_vec.h"
32 
37 class MDL
38 {
39 public:
44  static void str2LabelVector(const String &labelsStr, std::vector<MDLabel> &labels);
45  static MDLabel str2Label(const String &labelName);
47  static String label2Str(const MDLabel &label);
49  static String label2StrSql(const MDLabel label);
51  static String label2SqlColumn(const MDLabel label);
53  static String labelType2Str(MDLabelType type);
60  static bool isInt(const MDLabel label);
61  static bool isLong(const MDLabel label);
62  static bool isBool(const MDLabel label);
63  static bool isString(const MDLabel label);
64  static bool isDouble(const MDLabel label);
65  static bool isVector(const MDLabel label);
66  static bool isVectorLong(const MDLabel label);
67  static bool isValidLabel(const MDLabel &label);
68  static bool isValidLabel(const String &labelName);
69  static MDLabelType labelType(const MDLabel label);
70  static MDLabelType labelType(const String &labelName);
71  static bool hasTag(const MDLabel label, const int tags);
72  static bool isTextFile(const MDLabel label);
73  static bool isMetadata(const MDLabel label);
74  static bool isCtfParam(const MDLabel label);
75  static bool isImage(const MDLabel label);
76  static bool isVolume(const MDLabel label);
77  static bool isStack(const MDLabel label);
78  static bool isMicrograph(const MDLabel label);
79  static bool isPSD(const MDLabel label);
80  static std::map<String, MDLabel>& getLabelDict();
95  static void addLabelAlias(MDLabel label, const String &alias,
96  bool replace=false, MDLabelType type=LABEL_NOTYPE);
97 
103  static MDLabel getNewAlias(const String &alias, MDLabelType type=LABEL_NOTYPE);
104 
109  static void resetBufferIndex();
110 
111  static MDRowSql emptyHeaderSql();
112  static MDRowVec emptyHeaderVec();
113  static void emptifyHeader(MDRow&);
114 
115 private:
116  //Array of MDLabelData pointers
117  static MDLabelData * data[MDL_LAST_LABEL+1];
118  static std::map<std::string, MDLabel> names;
119  static MDLabelStaticInit initialization; //Just for initialization
120  static MDLabel bufferIndex; // Index that will be used to return next label alias
121 
123  static void addLabel(MDLabel label, MDLabelType type, const String &name, int tags=TAGLABEL_NOTAG);
125  static void addExtraAliases();
126  friend class MDLabelStaticInit;
127 
128 };//close class MLD definition
129 
130 
133 class MDLabelStaticInit
134 {
135 private:
136  MDLabelStaticInit()
137  {
138  //Just to be safe, initialize all data to null
139  for (int i = (int)MDL_FIRST_LABEL; i <= (int)MDL_LAST_LABEL; ++i)
140  MDL::data[i] = NULL;
141 
143  //The label MDL_OBJID is special and should not be used
144  MDL::addLabel(MDL_OBJID, LABEL_SIZET, "objId");
145  //The label MDL_GATHER_ID is special and should not be used
146  MDL::addLabel(MDL_GATHER_ID, LABEL_SIZET, "gatherId");
147 
148  //MDL::addLabel(MDL_ANGLE_COMPARISON, LABEL_VECTOR_DOUBLE, "angle_comparison");
149  //MDL::addLabelAlias(MDL_ANGLE_COMPARISON, "angleComparison"); //3.0
150 
151  MDL::addLabel(MDL_ANGLE_PSI, LABEL_DOUBLE, "anglePsi");
152  MDL::addLabelAlias(MDL_ANGLE_PSI, "psi");
153  MDL::addLabel(MDL_ANGLE_PSI2, LABEL_DOUBLE, "anglePsi2");
154  MDL::addLabelAlias(MDL_ANGLE_PSI2, "psi2");
155  MDL::addLabel(MDL_ANGLE_PSI3, LABEL_DOUBLE, "anglePsi3");
156  MDL::addLabelAlias(MDL_ANGLE_PSI3, "psi3");
157  MDL::addLabel(MDL_ANGLE_PSI_DIFF, LABEL_DOUBLE, "anglePsiDiff");
158  MDL::addLabel(MDL_ANGLE_ROT, LABEL_DOUBLE, "angleRot");
159  MDL::addLabelAlias(MDL_ANGLE_ROT, "rot");
160  MDL::addLabel(MDL_ANGLE_ROT2, LABEL_DOUBLE, "angleRot2");
161  MDL::addLabelAlias(MDL_ANGLE_ROT2, "rot2");
162  MDL::addLabel(MDL_ANGLE_ROT3, LABEL_DOUBLE, "angleRot3");
163  MDL::addLabelAlias(MDL_ANGLE_ROT3, "rot3");
164  MDL::addLabel(MDL_ANGLE_ROT_DIFF, LABEL_DOUBLE, "angleRotDiff");
165  MDL::addLabel(MDL_ANGLE_TILT, LABEL_DOUBLE, "angleTilt");
166  MDL::addLabelAlias(MDL_ANGLE_TILT, "tilt");
167  MDL::addLabel(MDL_ANGLE_TILT2, LABEL_DOUBLE, "angleTilt2");
168  MDL::addLabelAlias(MDL_ANGLE_TILT2, "tilt2");
169  MDL::addLabel(MDL_ANGLE_TILT3, LABEL_DOUBLE, "angleTilt3");
170  MDL::addLabelAlias(MDL_ANGLE_TILT3, "tilt3");
171  MDL::addLabel(MDL_ANGLE_TILT_DIFF, LABEL_DOUBLE, "angleTiltDiff");
172  MDL::addLabel(MDL_ANGLE_DIFF0, LABEL_DOUBLE, "angleDiff0");
173  MDL::addLabel(MDL_ANGLE_DIFF, LABEL_DOUBLE, "angleDiff");
174  MDL::addLabel(MDL_ANGLE_DIFF2, LABEL_DOUBLE, "angleDiff2");
175  MDL::addLabel(MDL_ANGLE_Y, LABEL_DOUBLE, "angleY");
176  MDL::addLabel(MDL_ANGLE_Y2, LABEL_DOUBLE, "angleY2");
177  MDL::addLabel(MDL_ANGLE_TEMPERATURE, LABEL_DOUBLE, "angleTemp");
178 
179  MDL::addLabel(MDL_APPLY_SHIFT, LABEL_BOOL, "applyShift");
180  MDL::addLabel(MDL_AVG, LABEL_DOUBLE, "avg");
181  MDL::addLabel(MDL_AVG_CHANGES_ORIENTATIONS, LABEL_DOUBLE, "avgChanOrient");
182  MDL::addLabel(MDL_AVG_CHANGES_OFFSETS, LABEL_DOUBLE, "avgChanOffset");
183  MDL::addLabel(MDL_AVG_CHANGES_CLASSES, LABEL_DOUBLE, "avgChanClass");
184  MDL::addLabel(MDL_AVGPMAX, LABEL_DOUBLE, "avgPMax");
185 
186  MDL::addLabel(MDL_BFACTOR, LABEL_DOUBLE, "bFactor");
187  MDL::addLabel(MDL_BGMEAN, LABEL_DOUBLE, "bgMean");
188  MDL::addLabel(MDL_BLOCK_NUMBER, LABEL_INT, "blockNumber");
189 
190  MDL::addLabel(MDL_CL2D_CHANGES, LABEL_INT, "cl2dChanges");
191  MDL::addLabel(MDL_CL2D_SIMILARITY, LABEL_DOUBLE, "cl2dSimilarity");
192  MDL::addLabel(MDL_CLASS_COUNT, LABEL_SIZET, "classCount");
193  MDL::addLabelAlias(MDL_CLASS_COUNT, "class_count"); //3.0
194  MDL::addLabel(MDL_CLASS_PERCENTAGE, LABEL_DOUBLE, "classPercentage");
195  MDL::addLabel(MDL_CLASSIFICATION_DATA, LABEL_VECTOR_DOUBLE, "classificationData");
196  MDL::addLabelAlias(MDL_CLASSIFICATION_DATA, "ClassificationData");
197  MDL::addLabel(MDL_CLASSIFICATION_DATA_SIZE, LABEL_SIZET, "classificationDatasize");
198  MDL::addLabelAlias(MDL_CLASSIFICATION_DATA_SIZE, "ClassificationDataSize");
199  MDL::addLabel(MDL_CLASSIFICATION_DPR_05, LABEL_DOUBLE, "classificationDPR05");
200  MDL::addLabelAlias(MDL_CLASSIFICATION_DPR_05, "ClassificationDPR05");
201  MDL::addLabel(MDL_CLASSIFICATION_FRC_05, LABEL_DOUBLE, "classificationFRC05");
202  MDL::addLabelAlias(MDL_CLASSIFICATION_FRC_05, "ClassificationFRC05");
203  MDL::addLabel(MDL_CLASSIFICATION_INTRACLASS_DISTANCE, LABEL_DOUBLE, "classificationIntraclassDistance");
204  MDL::addLabelAlias(MDL_CLASSIFICATION_INTRACLASS_DISTANCE, "ClassificationIntraclassDistance");
205  MDL::addLabel(MDL_COLOR, LABEL_INT, "color");
206  MDL::addLabel(MDL_COMMENT, LABEL_STRING, "comment");
207  MDL::addLabel(MDL_COST, LABEL_DOUBLE, "cost");
208  MDL::addLabel(MDL_COST_PERCENTILE, LABEL_DOUBLE, "costPerc");
209  MDL::addLabel(MDL_COORD_CONSENSUS_SCORE, LABEL_DOUBLE, "CoordConsScore");
210  MDL::addLabel(MDL_COUNT2, LABEL_SIZET, "count2");
211  MDL::addLabel(MDL_COUNT, LABEL_SIZET, "count");
212  MDL::addLabel(MDL_CORR_DENOISED_PROJECTION, LABEL_DOUBLE, "corrDenoisedProjection");
213  MDL::addLabel(MDL_CORR_DENOISED_NOISY, LABEL_DOUBLE, "corrDenoisedNoisy");
214  MDL::addLabel(MDL_CORRELATION_IDX, LABEL_DOUBLE, "corrIdx");
215  MDL::addLabel(MDL_CORRELATION_MASK, LABEL_DOUBLE, "corrMask");
216  MDL::addLabel(MDL_CORRELATION_WEIGHT, LABEL_DOUBLE, "corrWeight");
217 
218  MDL::addLabel(MDL_CLASS_INTERSECTION_SIZE_PVALUE, LABEL_DOUBLE, "classIntersectionSizePValue");
219  MDL::addLabel(MDL_CLASS_INTERSECTION_RELATIVE_SIZE_PVALUE, LABEL_DOUBLE, "classIntersectionRelativeSizePValue");
220 
221  MDL::addLabel(MDL_CRYSTAL_CELLX, LABEL_INT, "crystalCellx");
222  MDL::addLabel(MDL_CRYSTAL_CELLY, LABEL_INT, "crystalCelly");
223  MDL::addLabel(MDL_CRYSTAL_DISAPPEAR_THRE, LABEL_DOUBLE, "crystalDisthresh");
224  MDL::addLabel(MDL_CRYSTAL_LATTICE_A, LABEL_VECTOR_DOUBLE, "crystalLatticeA");
225  MDL::addLabel(MDL_CRYSTAL_LATTICE_B, LABEL_VECTOR_DOUBLE, "crystalLatticeB");
226  MDL::addLabel(MDL_CRYSTAL_ORTHO_PRJ, LABEL_BOOL, "crystalOrthoProj");
227  MDL::addLabel(MDL_CRYSTAL_PROJ, LABEL_BOOL, "crystalProj");
228  MDL::addLabel(MDL_CRYSTAL_SHFILE, LABEL_STRING, "crystalShiftFile");
229  MDL::addLabel(MDL_CRYSTAL_SHIFTX, LABEL_DOUBLE, "crystalShiftX");
230  MDL::addLabel(MDL_CRYSTAL_SHIFTY, LABEL_DOUBLE, "crystalShiftY");
231  MDL::addLabel(MDL_CRYSTAL_SHIFTZ, LABEL_DOUBLE, "crystalShiftZ");
232  MDL::addLabel(MDL_CRYSTAL_NOISE_SHIFT,LABEL_VECTOR_DOUBLE, "crystalNoiseShift");
233  MDL::addLabel(MDL_CTF_BG_BASELINE, LABEL_DOUBLE, "ctfBgBaseline");
234  MDL::addLabelAlias(MDL_CTF_BG_BASELINE, "CTFBG_Baseline");//3.0
235  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_ANGLE, LABEL_DOUBLE, "ctfBgGaussian2Angle");
236  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_ANGLE, "CTFBG_Gaussian2_Angle"); //3.0
237  MDL::addLabel(MDL_CTF_BG_R1, LABEL_DOUBLE, "ctfBgR1");
238  MDL::addLabel(MDL_CTF_BG_R2, LABEL_DOUBLE, "ctfBgR2");
239  MDL::addLabel(MDL_CTF_BG_R3, LABEL_DOUBLE, "ctfBgR3");
240 
241  MDL::addLabel(MDL_CTF_DATA_PHASE_FLIPPED, LABEL_BOOL, "ctfPhaseFlipped");
242  MDL::addLabel(MDL_CTF_CORRECTED, LABEL_BOOL, "ctfCorrected");
243  MDL::addLabel(MDL_CTF_X0, LABEL_DOUBLE, "ctfX0");
244  MDL::addLabel(MDL_CTF_XF, LABEL_DOUBLE, "ctfXF");
245  MDL::addLabel(MDL_CTF_Y0, LABEL_DOUBLE, "ctfY0");
246  MDL::addLabel(MDL_CTF_YF, LABEL_DOUBLE, "ctfYF");
247  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEUA, LABEL_DOUBLE, "ctfDefocusPlaneUA");
248  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEUB, LABEL_DOUBLE, "ctfDefocusPlaneUB");
249  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEUC, LABEL_DOUBLE, "ctfDefocusPlaneUC");
250  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEVA, LABEL_DOUBLE, "ctfDefocusPlaneVA");
251  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEVB, LABEL_DOUBLE, "ctfDefocusPlaneVB");
252  MDL::addLabel(MDL_CTF_DEFOCUS_PLANEVC, LABEL_DOUBLE, "ctfDefocusPlaneVC");
253 
254 
255  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_CU, LABEL_DOUBLE, "ctfBgGaussian2CU");
256  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_CV, LABEL_DOUBLE, "ctfBgGaussian2CV");
257  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_K, LABEL_DOUBLE, "ctfBgGaussian2K");
258  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_SIGMAU, LABEL_DOUBLE, "ctfBgGaussian2SigmaU");
259  MDL::addLabel(MDL_CTF_BG_GAUSSIAN2_SIGMAV, LABEL_DOUBLE, "ctfBgGaussian2SigmaV");
260  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_ANGLE, LABEL_DOUBLE, "ctfBgGaussianAngle");
261  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_CU, LABEL_DOUBLE, "ctfBgGaussianCU");
262  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_CV, LABEL_DOUBLE, "ctfBgGaussianCV");
263  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_K, LABEL_DOUBLE, "ctfBgGaussianK");
264  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_SIGMAU, LABEL_DOUBLE, "ctfBgGaussianSigmaU");
265  MDL::addLabel(MDL_CTF_BG_GAUSSIAN_SIGMAV, LABEL_DOUBLE, "ctfBgGaussianSigmaV");
266  MDL::addLabel(MDL_CTF_PHASE_SHIFT, LABEL_DOUBLE, "ctfVPPphaseshift");
267  MDL::addLabel(MDL_CTF_VPP_RADIUS, LABEL_DOUBLE, "ctfVPPRadius");
268 
269  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_CU, "CTFBG_Gaussian2_CU");//3.0
270  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_CV, "CTFBG_Gaussian2_CV");//3.0
271  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_K, "CTFBG_Gaussian2_K");//3.0
272  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_SIGMAU, "CTFBG_Gaussian2_SigmaU");//3.0
273  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN2_SIGMAV, "CTFBG_Gaussian2_SigmaV");//3.0
274  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_ANGLE, "CTFBG_Gaussian_Angle");//3.0
275  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_CU, "CTFBG_Gaussian_CU");//3.0
276  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_CV, "CTFBG_Gaussian_CV");//3.0
277  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_K, "CTFBG_Gaussian_K");//3.0
278  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_SIGMAU, "CTFBG_Gaussian_SigmaU");//3.0
279  MDL::addLabelAlias(MDL_CTF_BG_GAUSSIAN_SIGMAV, "CTFBG_Gaussian_SigmaV");//3.0
280 
281  MDL::addLabel(MDL_CTF_BG_SQRT_ANGLE, LABEL_DOUBLE, "ctfBgSqrtAngle");
282  MDL::addLabel(MDL_CTF_BG_SQRT_K, LABEL_DOUBLE, "ctfBgSqrtK");
283  MDL::addLabel(MDL_CTF_BG_SQRT_U, LABEL_DOUBLE, "ctfBgSqrtU");
284  MDL::addLabel(MDL_CTF_BG_SQRT_V, LABEL_DOUBLE, "ctfBgSqrtV");
285  MDL::addLabelAlias(MDL_CTF_BG_SQRT_ANGLE, "CTFBG_Sqrt_Angle");//3.0
286  MDL::addLabelAlias(MDL_CTF_BG_SQRT_K, "CTFBG_Sqrt_K");//3.0
287  MDL::addLabelAlias(MDL_CTF_BG_SQRT_U, "CTFBG_Sqrt_U");//3.0
288  MDL::addLabelAlias(MDL_CTF_BG_SQRT_V, "CTFBG_Sqrt_V"); //3.0
289 
290  MDL::addLabel(MDL_CONTINUOUS_X, LABEL_DOUBLE, "continuousX");
291  MDL::addLabel(MDL_CONTINUOUS_Y, LABEL_DOUBLE, "continuousY");
292  MDL::addLabel(MDL_CONTINUOUS_FLIP, LABEL_BOOL, "continuousFlip");
293  MDL::addLabel(MDL_CONTINUOUS_GRAY_A, LABEL_DOUBLE, "continuousA");
294  MDL::addLabel(MDL_CONTINUOUS_GRAY_B, LABEL_DOUBLE, "continuousB");
295  MDL::addLabel(MDL_CONTINUOUS_SCALE_ANGLE, LABEL_DOUBLE, "continuousScaleAngle");
296  MDL::addLabel(MDL_CONTINUOUS_SCALE_X, LABEL_DOUBLE, "continuousScaleX");
297  MDL::addLabel(MDL_CONTINUOUS_SCALE_Y, LABEL_DOUBLE, "continuousScaleY");
298  MDL::addLabel(MDL_CTF_CA, LABEL_DOUBLE, "ctfChromaticAberration");
299  MDL::addLabel(MDL_CTF_CONVERGENCE_CONE, LABEL_DOUBLE, "ctfConvergenceCone");
300  MDL::addLabel(MDL_CTF_CRIT_NONASTIGMATICVALIDITY, LABEL_DOUBLE, "ctfCritNonAstigmaticValidty");
301  MDL::addLabel(MDL_CTF_CRIT_DAMPING, LABEL_DOUBLE, "ctfCritDamping");
302  MDL::addLabel(MDL_CTF_CRIT_FIRSTZEROAVG, LABEL_DOUBLE, "ctfCritFirstZero");
303  MDL::addLabel(MDL_CTF_CRIT_FIRSTZERODISAGREEMENT, LABEL_DOUBLE, "ctfCritDisagree");
304  MDL::addLabel(MDL_CTF_CRIT_MAXFREQ, LABEL_DOUBLE, "ctfCritMaxFreq");
305  MDL::addLabel(MDL_CTF_CRIT_FIRSTZERORATIO, LABEL_DOUBLE, "ctfCritfirstZeroRatio");
306  MDL::addLabel(MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_RATIO, LABEL_DOUBLE, "ctfCritFirstMinFirstZeroRatio");
307  MDL::addLabel(MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_DIFF_RATIO, LABEL_DOUBLE, "ctfCritCtfMargin");
308  MDL::addLabel(MDL_CTF_CRIT_FITTINGCORR13, LABEL_DOUBLE, "ctfCritCorr13");
309  MDL::addLabel(MDL_CTF_CRIT_FITTINGSCORE, LABEL_DOUBLE, "ctfCritFitting");
310  MDL::addLabel(MDL_CTF_CRIT_ICENESS, LABEL_DOUBLE, "ctfCritIceness");
311  MDL::addLabel(MDL_CTF_CRIT_NORMALITY, LABEL_DOUBLE, "ctfCritNormality");
312  MDL::addLabel(MDL_CTF_CRIT_PSDCORRELATION90, LABEL_DOUBLE, "ctfCritPsdCorr90");
313  MDL::addLabel(MDL_CTF_CRIT_PSDPCA1VARIANCE, LABEL_DOUBLE, "ctfCritPsdPCA1");
314  MDL::addLabel(MDL_CTF_CRIT_PSDPCARUNSTEST, LABEL_DOUBLE, "ctfCritPsdPCARuns");
315  MDL::addLabel(MDL_CTF_CRIT_PSDRADIALINTEGRAL, LABEL_DOUBLE, "ctfCritPsdInt");
316  MDL::addLabel(MDL_CTF_CRIT_PSDVARIANCE, LABEL_DOUBLE, "ctfCritPsdStdQ");
317  MDL::addLabel(MDL_CTF_CS, LABEL_DOUBLE, "ctfSphericalAberration");
318  MDL::addLabel(MDL_CTF_DEFOCUSA, LABEL_DOUBLE, "ctfDefocusA");//average defocus
319  MDL::addLabel(MDL_CTF_DEFOCUS_ANGLE, LABEL_DOUBLE, "ctfDefocusAngle");
320  MDL::addLabel(MDL_CTF_DEFOCUSU, LABEL_DOUBLE, "ctfDefocusU");
321  MDL::addLabel(MDL_CTF_DEFOCUSV, LABEL_DOUBLE, "ctfDefocusV");
322  MDL::addLabel(MDL_CTF_DEFOCUS_CHANGE, LABEL_DOUBLE, "ctfDefocusChange");
323  MDL::addLabel(MDL_CTF_DEFOCUS_R2, LABEL_DOUBLE, "ctfDefocusR2");
324  MDL::addLabel(MDL_CTF_DEFOCUS_RESIDUAL, LABEL_DOUBLE, "ctfDefocusResidual");
325  MDL::addLabel(MDL_CTF_DEFOCUS_COEFS, LABEL_VECTOR_DOUBLE, "ctfDefocusCoeficients");
326  MDL::addLabel(MDL_CTF_DIMENSIONS, LABEL_VECTOR_DOUBLE, "ctfDimensions");
327  MDL::addLabel(MDL_CTF_DOWNSAMPLE_PERFORMED, LABEL_DOUBLE, "CtfDownsampleFactor");
328  MDL::addLabel(MDL_CTF_ENERGY_LOSS, LABEL_DOUBLE, "ctfEnergyLoss");
329  MDL::addLabel(MDL_CTF_ENVELOPE, LABEL_DOUBLE, "ctfEnvelope");
330  MDL::addLabel(MDL_CTF_ENVELOPE_PLOT, LABEL_STRING, "ctfEnvelopePlot");
331  MDL::addLabel(MDL_CTF_GROUP, LABEL_INT, "ctfGroup");
332  MDL::addLabel(MDL_CTF_INPUTPARAMS, LABEL_STRING, "ctfInputParams", TAGLABEL_TEXTFILE);
333  MDL::addLabel(MDL_CTF_K, LABEL_DOUBLE, "ctfK");
334  MDL::addLabel(MDL_CTF_ENV_R0, LABEL_DOUBLE, "ctfEnvR0");
335  MDL::addLabel(MDL_CTF_ENV_R1, LABEL_DOUBLE, "ctfEnvR1");
336  MDL::addLabel(MDL_CTF_ENV_R2, LABEL_DOUBLE, "ctfEnvR2");
337  MDL::addLabel(MDL_CTF_LAMBDA, LABEL_DOUBLE, "ctfLambda");
338  MDL::addLabel(MDL_CTF_LENS_STABILITY, LABEL_DOUBLE, "ctfLensStability");
339  MDL::addLabel(MDL_CTF_LONGITUDINAL_DISPLACEMENT, LABEL_DOUBLE, "ctfLongitudinalDisplacement");
340  MDL::addLabel(MDL_CTF_MODEL2, LABEL_STRING, "ctfModel2", TAGLABEL_CTFPARAM);
341  MDL::addLabel(MDL_CTF_MODEL, LABEL_STRING, "ctfModel", TAGLABEL_CTFPARAM);
342  MDL::addLabel(MDL_CTF_Q0, LABEL_DOUBLE, "ctfQ0");
343  MDL::addLabel(MDL_CTF_SAMPLING_RATE, LABEL_DOUBLE, "ctfSamplingRate");
344  MDL::addLabel(MDL_CTF_SAMPLING_RATE_Z, LABEL_DOUBLE, "ctfSamplingRateZ");
345  MDL::addLabel(MDL_CTF_TRANSVERSAL_DISPLACEMENT, LABEL_DOUBLE, "ctfTransversalDisplacement");
346  MDL::addLabel(MDL_CTF_VOLTAGE, LABEL_DOUBLE, "ctfVoltage");
347  MDL::addLabel(MDL_CTF_XRAY_LENS_TYPE, LABEL_STRING, "ctfXrayLensType");
348  MDL::addLabel(MDL_CTF_XRAY_OUTER_ZONE_WIDTH, LABEL_DOUBLE, "ctfXrayOuterZoneWidth");
349  MDL::addLabel(MDL_CTF_XRAY_ZONES_NUMBER, LABEL_DOUBLE, "ctfXrayZonesN");
350  MDL::addLabel(MDL_CUMULATIVE_SSNR, LABEL_DOUBLE, "cumulativeSSNR");
351 
352  MDL::addLabelAlias(MDL_CTF_CA, "CTF_Chromatic_aberration"); //3.0
353  MDL::addLabelAlias(MDL_CTF_CONVERGENCE_CONE, "CTF_Convergence_cone"); //3.0
354  MDL::addLabelAlias(MDL_CTF_CRIT_DAMPING, "CTFCrit_damping"); //3.0
355  MDL::addLabelAlias(MDL_CTF_CRIT_FIRSTZEROAVG, "CTFCrit_firstZero"); //3.0
356  MDL::addLabelAlias(MDL_CTF_CRIT_FIRSTZERODISAGREEMENT, "CTFCrit_disagree"); //3.0
357  MDL::addLabelAlias(MDL_CTF_CRIT_FIRSTZERORATIO, "CTFCrit_firstZeroRatio"); //3.0
358  MDL::addLabelAlias(MDL_CTF_CRIT_FITTINGCORR13, "CTFCrit_Corr13"); //3.0
359  MDL::addLabelAlias(MDL_CTF_CRIT_FITTINGSCORE, "CTFCrit_Fitting"); //3.0
360  MDL::addLabelAlias(MDL_CTF_CRIT_NORMALITY, "CTFCrit_Normality"); //3.0
361  MDL::addLabelAlias(MDL_CTF_CRIT_PSDCORRELATION90, "CTFCrit_psdcorr90"); //3.0
362  MDL::addLabelAlias(MDL_CTF_CRIT_PSDPCA1VARIANCE, "CTFCrit_PSDPCA1"); //3.0
363  MDL::addLabelAlias(MDL_CTF_CRIT_PSDPCARUNSTEST, "CTFCrit_PSDPCARuns"); //3.0
364  MDL::addLabelAlias(MDL_CTF_CRIT_PSDRADIALINTEGRAL, "CTFCrit_psdint"); //3.0
365  MDL::addLabelAlias(MDL_CTF_CRIT_PSDVARIANCE, "CTFCrit_PSDStdQ"); //3.0
366  MDL::addLabelAlias(MDL_CTF_CS, "CTF_Spherical_aberration"); //3.0
367  MDL::addLabelAlias(MDL_CTF_DEFOCUSA, "CTF_Defocus_A"); //3.0//average defocus
368  MDL::addLabelAlias(MDL_CTF_DEFOCUS_ANGLE, "CTF_Defocus_angle"); //3.0
369  MDL::addLabelAlias(MDL_CTF_DEFOCUSU, "CTF_Defocus_U"); //3.0
370  MDL::addLabelAlias(MDL_CTF_DEFOCUSV, "CTF_Defocus_V"); //3.0
371  MDL::addLabelAlias(MDL_CTF_DIMENSIONS, "CTF_Xray_dimensions"); //3.0
372  MDL::addLabelAlias(MDL_CTF_DOWNSAMPLE_PERFORMED, "CTFDownsampleFactor"); //3.0
373  MDL::addLabelAlias(MDL_CTF_ENERGY_LOSS, "CTF_Energy_loss"); //3.0
374  MDL::addLabelAlias(MDL_CTF_GROUP, "CTFGroup"); //3.0
375  MDL::addLabelAlias(MDL_CTF_INPUTPARAMS, "CTFInputParams"); //3.0
376  MDL::addLabelAlias(MDL_CTF_K, "CTF_K"); //3.0
377  MDL::addLabelAlias(MDL_CTF_LAMBDA, "CTF_Xray_lambda"); //3.0
378  MDL::addLabelAlias(MDL_CTF_LENS_STABILITY, "CTF_Lens_stability"); //3.0
379  MDL::addLabelAlias(MDL_CTF_LONGITUDINAL_DISPLACEMENT, "CTF_Longitudinal_displacement"); //3.0
380  MDL::addLabelAlias(MDL_CTF_MODEL2, "CTFModel2"); //3.0
381  MDL::addLabelAlias(MDL_CTF_MODEL, "CTFModel"); //3.0
382  MDL::addLabelAlias(MDL_CTF_Q0, "CTF_Q0"); //3.0
383  MDL::addLabelAlias(MDL_CTF_SAMPLING_RATE, "CTF_Sampling_rate"); //3.0
384  MDL::addLabelAlias(MDL_CTF_SAMPLING_RATE_Z, "CTF_Sampling_rate_z"); //3.0
385  MDL::addLabelAlias(MDL_CTF_TRANSVERSAL_DISPLACEMENT, "CTF_Transversal_displacement"); //3.0
386  MDL::addLabelAlias(MDL_CTF_VOLTAGE, "CTF_Voltage"); //3.0
387  MDL::addLabelAlias(MDL_CTF_XRAY_LENS_TYPE, "CTF_Xray_lens_type"); //3.0
388  MDL::addLabelAlias(MDL_CTF_XRAY_OUTER_ZONE_WIDTH, "CTF_Xray_OuterZoneWidth"); //3.0
389  MDL::addLabelAlias(MDL_CTF_XRAY_ZONES_NUMBER, "CTF_Xray_ZonesN"); //3.0
390 
391  MDL::addLabel(MDL_DATATYPE, LABEL_INT, "datatype");
392  MDL::addLabel(MDL_DEFGROUP, LABEL_INT, "defocusGroup");
393  MDL::addLabel(MDL_DIMENSIONS_2D, LABEL_VECTOR_DOUBLE, "dimensions2D");
394  MDL::addLabel(MDL_DIMENSIONS_3D, LABEL_VECTOR_DOUBLE, "dimensions3D");
395  MDL::addLabel(MDL_DIMRED, LABEL_VECTOR_DOUBLE, "dimredCoeffs");
396  MDL::addLabel(MDL_DIRECTION, LABEL_VECTOR_DOUBLE, "direction");
397  MDL::addLabel(MDL_DM3_IDTAG, LABEL_INT, "dm3IdTag");
398  MDL::addLabel(MDL_DM3_NODEID, LABEL_INT, "dm3NodeId");
399  MDL::addLabel(MDL_DM3_NUMBER_TYPE, LABEL_INT, "dm3NumberType");
400  MDL::addLabel(MDL_DM3_PARENTID, LABEL_INT, "dm3ParentID");
401  MDL::addLabel(MDL_DM3_SIZE, LABEL_INT, "dm3Size");
402  MDL::addLabel(MDL_DM3_TAGCLASS, LABEL_STRING, "dm3TagClass");
403  MDL::addLabel(MDL_DM3_TAGNAME, LABEL_STRING, "dm3TagName");
404  MDL::addLabel(MDL_DM3_VALUE, LABEL_VECTOR_DOUBLE, "dm3Value");
405  MDL::addLabel(MDL_DOSE, LABEL_DOUBLE, "dose");
406 
407  MDL::addLabel(MDL_ENABLED, LABEL_INT, "enabled");
408 
409  //MDL_EXECUTION_DATE so far an string but may change...
410  MDL::addLabel(MDL_DATE, LABEL_STRING, "date");
411  MDL::addLabel(MDL_TIME, LABEL_DOUBLE, "time");
412 
413  MDL::addLabel(MDL_FLIP, LABEL_BOOL, "flip");
414  MDL::addLabelAlias(MDL_FLIP, "Flip");
415  MDL::addLabel(MDL_FOM, LABEL_DOUBLE, "fom");
416  MDL::addLabel(MDL_FRAME_ID, LABEL_SIZET, "frameId");
417 
418  MDL::addLabel(MDL_GRAPH_DISTANCE2MAX, LABEL_DOUBLE, "distance2MaxGraph");
419  MDL::addLabel(MDL_GRAPH_DISTANCE2MAX_PREVIOUS, LABEL_DOUBLE, "distance2MaxGraphPrevious");
420  MDL::addLabel(MDL_GRAPH_CC, LABEL_DOUBLE, "graphCC");
421  MDL::addLabel(MDL_GRAPH_CC_PREVIOUS, LABEL_DOUBLE, "graphCCPrevious");
422  MDL::addLabel(MDL_HALF1, LABEL_STRING, "half1");
423  MDL::addLabel(MDL_HALF2, LABEL_STRING, "half2");
424  MDL::addLabel(MDL_ASSIGNED_DIR_REF_CC, LABEL_DOUBLE, "assignedDirRefCC");
425 
426  MDL::addLabel(MDL_IDX, LABEL_SIZET, "index");
427  MDL::addLabel(MDL_IMAGE1, LABEL_STRING, "image1", TAGLABEL_IMAGE);
428  MDL::addLabel(MDL_IMAGE2, LABEL_STRING, "image2", TAGLABEL_IMAGE);
429  MDL::addLabel(MDL_IMAGE3, LABEL_STRING, "image3", TAGLABEL_IMAGE);
430  MDL::addLabel(MDL_IMAGE4, LABEL_STRING, "image4", TAGLABEL_IMAGE);
431  MDL::addLabel(MDL_IMAGE5, LABEL_STRING, "image5", TAGLABEL_IMAGE);
432 
433  MDL::addLabelAlias(MDL_IMAGE1, "associatedImage1"); //3.0
434  MDL::addLabelAlias(MDL_IMAGE2, "associatedImage2"); //3.0
435  MDL::addLabelAlias(MDL_IMAGE3, "associatedImage3"); //3.0
436  MDL::addLabelAlias(MDL_IMAGE4, "associatedImage4"); //3.0
437  MDL::addLabelAlias(MDL_IMAGE5, "associatedImage5"); //3.0
438 
439  MDL::addLabel(MDL_IMAGE, LABEL_STRING, "image", TAGLABEL_IMAGE);
440  MDL::addLabel(MDL_IMAGE_COVARIANCE, LABEL_STRING, "imageCovariance", TAGLABEL_IMAGE);
441  MDL::addLabel(MDL_IMAGE_IDX, LABEL_SIZET, "imageIndex");
442  MDL::addLabel(MDL_IMAGE_ORIGINAL, LABEL_STRING, "imageOriginal", TAGLABEL_IMAGE);
443  MDL::addLabel(MDL_IMAGE_REF, LABEL_STRING, "imageRef", TAGLABEL_IMAGE);
444  MDL::addLabel(MDL_IMAGE_RESIDUAL, LABEL_STRING, "imageResidual", TAGLABEL_IMAGE);
445  MDL::addLabel(MDL_IMAGE_TILTED, LABEL_STRING, "imageTilted", TAGLABEL_IMAGE);
446 
447  MDL::addLabelAlias(MDL_IMAGE_ORIGINAL, "original_image"); //3.0
448  MDL::addLabelAlias(MDL_IMAGE_TILTED, "tilted_image"); //3.0
449 
450  MDL::addLabel(MDL_IMED, LABEL_DOUBLE, "imedValue");
451 
452  MDL::addLabel(MDL_IMGMD, LABEL_STRING, "imageMetaData", TAGLABEL_METADATA);
453  MDL::addLabel(MDL_INTSCALE, LABEL_DOUBLE, "intScale");
454 
455  MDL::addLabel(MDL_ITEM_ID, LABEL_SIZET, "itemId");
456  MDL::addLabel(MDL_ITER, LABEL_INT, "iterationNumber");
457 
458  MDL::addLabel(MDL_KERDENSOM_FUNCTIONAL, LABEL_DOUBLE, "kerdensomFunctional");
459  MDL::addLabel(MDL_KERDENSOM_REGULARIZATION, LABEL_DOUBLE, "kerdensomRegularization");
460  MDL::addLabel(MDL_KERDENSOM_SIGMA, LABEL_DOUBLE, "kerdensomSigma");
461 
462  MDL::addLabel(MDL_KEYWORDS, LABEL_STRING, "keywords");
463  MDL::addLabel(MDL_KSTEST, LABEL_DOUBLE, "kstest");
464  MDL::addLabel(MDL_LL, LABEL_DOUBLE, "logLikelihood");
465  MDL::addLabelAlias(MDL_LL, "LL");
466  MDL::addLabel(MDL_LOCAL_ALIGNMENT_PATCHES, LABEL_VECTOR_SIZET, "localAlignmentPatches");
467  MDL::addLabel(MDL_LOCAL_ALIGNMENT_COEFFS_X, LABEL_VECTOR_DOUBLE, "localAlignmentCoeffsX");
468  MDL::addLabel(MDL_LOCAL_ALIGNMENT_COEFFS_Y, LABEL_VECTOR_DOUBLE, "localAlignmentCoeffsY");
469  MDL::addLabel(MDL_LOCAL_ALIGNMENT_CONF_2_5_PERC, LABEL_DOUBLE, "localAlignmnentConf25Perc");
470  MDL::addLabel(MDL_LOCAL_ALIGNMENT_CONF_97_5_PERC, LABEL_DOUBLE, "localAlignmnentConf955Perc");
471  MDL::addLabel(MDL_LOCAL_ALIGNMENT_CONTROL_POINTS, LABEL_VECTOR_SIZET, "localAlignmentControlPoints");
472  MDL::addLabel(MDL_LOCAL_AVERAGE, LABEL_DOUBLE, "localAverage");
473  MDL::addLabel(MDL_MACRO_CMD, LABEL_STRING, "macroCmd");
474  MDL::addLabel(MDL_MACRO_CMD_ARGS, LABEL_STRING, "macroCmdArgs");
475  MDL::addLabel(MDL_MAGNIFICATION, LABEL_DOUBLE, "magnification");
476  MDL::addLabel(MDL_MAPTOPOLOGY, LABEL_STRING, "mapTopology");
477  MDL::addLabel(MDL_MASK, LABEL_STRING, "mask", TAGLABEL_IMAGE);
478  MDL::addLabel(MDL_MAXCC, LABEL_DOUBLE, "maxCC");
479  MDL::addLabel(MDL_MAXCC_PERCENTILE, LABEL_DOUBLE, "maxCCPerc");
480  MDL::addLabel(MDL_MAX, LABEL_DOUBLE, "max");
481  MDL::addLabel(MDL_MAXCC_PREVIOUS, LABEL_DOUBLE, "maxCCprevious");
482  MDL::addLabel(MDL_MICROGRAPH_ID, LABEL_SIZET, "micrographId");
483  MDL::addLabel(MDL_MICROGRAPH, LABEL_STRING, "micrograph", TAGLABEL_MICROGRAPH);
484  MDL::addLabel(MDL_MICROGRAPH_MOVIE_ID, LABEL_SIZET, "micrographMovieId");
485  MDL::addLabel(MDL_MICROGRAPH_MOVIE, LABEL_STRING, "movie", TAGLABEL_MICROGRAPH);
486  MDL::addLabel(MDL_MICROGRAPH_PARTICLES, LABEL_STRING, "micrographParticles", TAGLABEL_MICROGRAPH);
487  MDL::addLabel(MDL_MICROGRAPH_ORIGINAL, LABEL_STRING, "micrographOriginal", TAGLABEL_MICROGRAPH);
488  MDL::addLabel(MDL_MICROGRAPH_TILTED, LABEL_STRING, "micrographTilted", TAGLABEL_MICROGRAPH);
489  MDL::addLabel(MDL_MICROGRAPH_TILTED_ORIGINAL, LABEL_STRING, "micrographTiltedOriginal", TAGLABEL_MICROGRAPH);
490  MDL::addLabel(MDL_MIN, LABEL_DOUBLE, "min");
491  MDL::addLabel(MDL_MIRRORFRAC, LABEL_DOUBLE, "mirrorFraction");
492  MDL::addLabel(MDL_MISSINGREGION_NR, LABEL_INT, "missingRegionNumber");
493  MDL::addLabelAlias(MDL_MISSINGREGION_NR, "Wedge");
494  MDL::addLabel(MDL_MISSINGREGION_THX0, LABEL_DOUBLE, "missingRegionThetaX0");
495  MDL::addLabel(MDL_MISSINGREGION_THXF, LABEL_DOUBLE, "missingRegionThetaXF");
496 
497  MDL::addLabel(MDL_MLF_CTF, LABEL_DOUBLE, "mlfCtf");
498  MDL::addLabel(MDL_MLF_WIENER, LABEL_DOUBLE, "mlfWiener");
499  MDL::addLabel(MDL_MLF_SIGNAL, LABEL_DOUBLE, "mlfSignal");
500  MDL::addLabel(MDL_MLF_NOISE, LABEL_DOUBLE, "mlfNoise");
501 
502  MDL::addLabel(MDL_MISSINGREGION_THY0, LABEL_DOUBLE, "missingRegionThetaY0");
503  MDL::addLabel(MDL_MISSINGREGION_THYF, LABEL_DOUBLE, "missingRegionThetaYF");
504  MDL::addLabel(MDL_MISSINGREGION_TYPE, LABEL_STRING, "missingRegionType");
505  MDL::addLabel(MDL_MODELFRAC, LABEL_DOUBLE, "modelFraction");
506  MDL::addLabel(MDL_NEIGHBORHOOD_RADIUS, LABEL_DOUBLE, "neighborhoodRadius");
507  MDL::addLabel(MDL_NEIGHBOR, LABEL_SIZET, "neighbor");
508  MDL::addLabel(MDL_NEIGHBORS, LABEL_VECTOR_SIZET, "neighbors");
509  MDL::addLabel(MDL_NMA, LABEL_VECTOR_DOUBLE, "nmaDisplacements");
510  MDL::addLabelAlias(MDL_NMA, "NMADisplacements");//3.0
511  MDL::addLabel(MDL_NMA_ATOMSHIFT, LABEL_DOUBLE, "nmaAtomShift");
512  MDL::addLabel(MDL_NMA_COLLECTIVITY, LABEL_DOUBLE, "nmaCollectivity");
513  MDL::addLabel(MDL_NMA_ENERGY, LABEL_DOUBLE, "nmaEnergy");
514  MDL::addLabel(MDL_NMA_MINRANGE, LABEL_DOUBLE, "nmaMin");
515  MDL::addLabel(MDL_NMA_MAXRANGE, LABEL_DOUBLE, "nmaMax");
516  MDL::addLabel(MDL_NMA_MODEFILE, LABEL_STRING, "nmaModefile", TAGLABEL_TEXTFILE);
517  MDL::addLabelAlias(MDL_NMA_MODEFILE, "NMAModefile");//3.0
518  MDL::addLabel(MDL_NMA_SCORE, LABEL_DOUBLE, "nmaScore");
519  MDL::addLabel(MDL_NMA_EIGENVAL, LABEL_DOUBLE, "nmaEigenval");
520  MDL::addLabel(MDL_NOISE_ANGLES, LABEL_VECTOR_DOUBLE, "noiseAngles");
521  MDL::addLabel(MDL_NOISE_COORD, LABEL_VECTOR_DOUBLE, "noiseCoord");
522  MDL::addLabel(MDL_NOISE_PARTICLE_COORD, LABEL_VECTOR_DOUBLE, "noiseParticleCoord");
523  MDL::addLabel(MDL_NOISE_PIXEL_LEVEL, LABEL_VECTOR_DOUBLE, "noisePixelLevel");
524  MDL::addLabel(MDL_ORDER, LABEL_SIZET, "order_");
525  MDL::addLabel(MDL_ORIGIN_X, LABEL_DOUBLE, "originX");
526  MDL::addLabel(MDL_ORIGIN_Y, LABEL_DOUBLE, "originY");
527  MDL::addLabel(MDL_ORIGIN_Z, LABEL_DOUBLE, "originZ");
528  MDL::addLabel(MDL_PARTICLE_ID, LABEL_SIZET, "particleId");
529  MDL::addLabel(MDL_PHANTOM_BGDENSITY, LABEL_DOUBLE, "phantomBGDensity");
530  MDL::addLabel(MDL_PHANTOM_FEATURE_CENTER, LABEL_VECTOR_DOUBLE, "featureCenter");
531  MDL::addLabel(MDL_PHANTOM_FEATURE_DENSITY, LABEL_DOUBLE, "featureDensity");
532  MDL::addLabel(MDL_PHANTOM_FEATURE_OPERATION, LABEL_STRING, "featureOperation");
533  MDL::addLabel(MDL_PHANTOM_FEATURE_SPECIFIC, LABEL_VECTOR_DOUBLE, "featureSpecificVector");
534  MDL::addLabel(MDL_PHANTOM_FEATURE_TYPE, LABEL_STRING, "featureType");
535  MDL::addLabel(MDL_PHANTOM_SCALE, LABEL_DOUBLE, "phantomScale");
536 
537  MDL::addLabel(MDL_OPTICALFLOW_MEANX, LABEL_DOUBLE, "opticalMeanX");
538  MDL::addLabel(MDL_OPTICALFLOW_MEANY, LABEL_DOUBLE, "opticalMeanY");
539  MDL::addLabel(MDL_OPTICALFLOW_STDX, LABEL_DOUBLE, "opticalStdX");
540  MDL::addLabel(MDL_OPTICALFLOW_STDY, LABEL_DOUBLE, "opticalStdY");
541 
542  MDL::addLabel(MDL_PICKING_STATE, LABEL_STRING, "pickingState");
543  MDL::addLabelAlias(MDL_PICKING_STATE, "picking_state");//3.0
544  MDL::addLabel(MDL_PICKING_MICROGRAPH_STATE, LABEL_STRING, "pickingMicrographState");
545  MDL::addLabelAlias(MDL_PICKING_MICROGRAPH_STATE, "micrograph_state");//3.0
546  MDL::addLabel(MDL_PICKING_PARTICLE_SIZE, LABEL_INT, "particleSize");
547  MDL::addLabel(MDL_PICKING_AUTOPICKPERCENT, LABEL_INT, "autopickPercent");
548  MDL::addLabel(MDL_PICKING_TEMPLATES, LABEL_INT, "templatesNum");
549  MDL::addLabel(MDL_PICKING_AUTOPARTICLES_SIZE, LABEL_INT, "autoParticlesNum");
550  MDL::addLabel(MDL_PICKING_MANUALPARTICLES_SIZE, LABEL_INT, "manualParticlesNum");
551 
552  MDL::addLabel(MDL_PMAX, LABEL_DOUBLE, "pMax");
553  MDL::addLabelAlias(MDL_PMAX, "Pmax");
554  MDL::addLabelAlias(MDL_PMAX, "sumP");
555  MDL::addLabel(MDL_POINTSASYMETRICUNIT, LABEL_SIZET, "pointsAsymmetricUnit");
556  MDL::addLabelAlias(MDL_POINTSASYMETRICUNIT, "pointsasymmetricUnit");
557  MDL::addLabel(MDL_PRJ_ANGFILE, LABEL_STRING, "projAngleFile");
558  MDL::addLabelAlias(MDL_PRJ_ANGFILE, "angleFile");//3.0
559  MDL::addLabel(MDL_PRJ_DIMENSIONS, LABEL_VECTOR_DOUBLE, "projDimensions");
560  MDL::addLabel(MDL_PRJ_PSI_NOISE, LABEL_VECTOR_DOUBLE, "projPsiNoise");
561  MDL::addLabel(MDL_PRJ_PSI_RANDSTR, LABEL_STRING, "projPsiRandomness");
562  MDL::addLabel(MDL_PRJ_PSI_RANGE, LABEL_VECTOR_DOUBLE, "projPsiRange");
563  MDL::addLabel(MDL_PRJ_ROT_NOISE, LABEL_VECTOR_DOUBLE, "projRotNoise");
564  MDL::addLabel(MDL_PRJ_ROT_RANDSTR, LABEL_STRING, "projRotRandomness");
565  MDL::addLabel(MDL_PRJ_ROT_RANGE, LABEL_VECTOR_DOUBLE, "projRotRange");
566  MDL::addLabel(MDL_PRJ_TILT_NOISE, LABEL_VECTOR_DOUBLE, "projTiltNoise");
567  MDL::addLabel(MDL_PRJ_TILT_RANDSTR, LABEL_STRING, "projTiltRandomness");
568  MDL::addLabel(MDL_PRJ_TILT_RANGE, LABEL_VECTOR_DOUBLE, "projTiltRange");
569  MDL::addLabel(MDL_PRJ_VOL, LABEL_STRING, "projVolume", TAGLABEL_VOLUME);
570 
571  MDL::addLabel(MDL_PROGRAM, LABEL_STRING, "program");
572  MDL::addLabel(MDL_USER, LABEL_STRING, "user");
573 
574  MDL::addLabel(MDL_PSD_ENHANCED, LABEL_STRING, "psdEnhanced", TAGLABEL_IMAGE);
575  MDL::addLabelAlias(MDL_PSD_ENHANCED, "enhancedPowerSpectrum");//3.0
576  MDL::addLabel(MDL_PSD, LABEL_STRING, "psd", TAGLABEL_PSD);
577  MDL::addLabelAlias(MDL_PSD, "powerSpectrum");//3.0
578  MDL::addLabel(MDL_RANDOMSEED, LABEL_INT, "randomSeed");
579  MDL::addLabel(MDL_REF2, LABEL_INT, "ref2");
580  MDL::addLabel(MDL_REF3D, LABEL_INT, "ref3d");
581  MDL::addLabel(MDL_REF, LABEL_INT, "ref");
582  MDL::addLabelAlias(MDL_REF, "Ref");
583  MDL::addLabel(MDL_REFMD, LABEL_STRING, "referenceMetaData", TAGLABEL_METADATA);
584 
585  MDL::addLabel(MDL_RESIDUE, LABEL_INT, "residue");
586  MDL::addLabel(MDL_RESOLUTION_ANISOTROPY, LABEL_DOUBLE, "resolutionAnisotropy");
587  MDL::addLabel(MDL_RESOLUTION_DPR, LABEL_DOUBLE, "resolutionDPR");
588  MDL::addLabel(MDL_RESOLUTION_ERRORL2, LABEL_DOUBLE, "resolutionErrorL2");
589  MDL::addLabel(MDL_RESOLUTION_FSO, LABEL_DOUBLE, "resolutionFSO");
590  MDL::addLabel(MDL_RESOLUTION_FRC, LABEL_DOUBLE, "resolutionFRC");
591  MDL::addLabel(MDL_RESOLUTION_FRCRANDOMNOISE, LABEL_DOUBLE, "resolutionFRCRandomNoise");
592  MDL::addLabel(MDL_RESOLUTION_FREQ, LABEL_DOUBLE, "resolutionFreqFourier");
593  MDL::addLabel(MDL_RESOLUTION_FREQ2, LABEL_DOUBLE, "resolutionFreqFourier2");
594  MDL::addLabel(MDL_RESOLUTION_FREQREAL, LABEL_DOUBLE, "resolutionFreqReal");
595  MDL::addLabel(MDL_RESOLUTION_LOCAL_RESIDUE, LABEL_DOUBLE, "localresolutionResidue");
596  MDL::addLabel(MDL_RESOLUTION_LOG_STRUCTURE_FACTOR, LABEL_DOUBLE, "resolutionLogStructure");
597  MDL::addLabel(MDL_RESOLUTION_STRUCTURE_FACTOR, LABEL_DOUBLE, "resolutionStructure");
598  MDL::addLabel(MDL_RESOLUTION_SSNR, LABEL_DOUBLE, "resolutionSSNR");
599  MDL::addLabel(MDL_RESOLUTION_RFACTOR, LABEL_DOUBLE, "resolutionRfactor");
600 
601  MDL::addLabelAlias(MDL_RESOLUTION_DPR, "DPR");
602  MDL::addLabelAlias(MDL_RESOLUTION_ERRORL2, "Error_l2");
603  MDL::addLabelAlias(MDL_RESOLUTION_FRC, "FRC");
604  MDL::addLabelAlias(MDL_RESOLUTION_FRCRANDOMNOISE, "FRC_random_noise");
605  MDL::addLabelAlias(MDL_RESOLUTION_FREQ, "Resol_Inverse_Ang");
606  MDL::addLabelAlias(MDL_RESOLUTION_FREQREAL, "Resol_Ang");
607 
608  MDL::addLabel(MDL_SAMPLINGRATE, LABEL_DOUBLE, "samplingRate");
609  MDL::addLabel(MDL_SAMPLINGRATE_ORIGINAL, LABEL_DOUBLE, "samplingRateOriginal");
610  MDL::addLabel(MDL_SAMPLINGRATE_X, LABEL_DOUBLE, "samplingRateX");
611  MDL::addLabel(MDL_SAMPLINGRATE_Y, LABEL_DOUBLE, "samplingRateY");
612  MDL::addLabel(MDL_SAMPLINGRATE_Z, LABEL_DOUBLE, "samplingRateZ");
613 
614  MDL::addLabelAlias(MDL_SAMPLINGRATE, "sampling_rate"); //3.0
615  MDL::addLabelAlias(MDL_SAMPLINGRATE_ORIGINAL, "sampling_rate_original"); //3.0
616  MDL::addLabelAlias(MDL_SAMPLINGRATE_X, "sampling_rateX"); //3.0
617  MDL::addLabelAlias(MDL_SAMPLINGRATE_Y, "sampling_rateY"); //3.0
618  MDL::addLabelAlias(MDL_SAMPLINGRATE_Z, "sampling_rateZ"); //3.0
619 
620  MDL::addLabel(MDL_SCALE, LABEL_DOUBLE, "scale");
621  MDL::addLabel(MDL_SCORE_BY_PCA_RESIDUAL_PROJ, LABEL_DOUBLE, "scoreByPcaResidualProj");
622  MDL::addLabel(MDL_SCORE_BY_PCA_RESIDUAL_EXP, LABEL_DOUBLE, "scoreByPcaResidualExp");
623  MDL::addLabel(MDL_SCORE_BY_PCA_RESIDUAL, LABEL_DOUBLE, "scoreByPcaResidual");
624  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY, LABEL_DOUBLE, "scoreByAlignability");
625  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_PRECISION, LABEL_DOUBLE, "scoreByAlignabilityPrecision");
626  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_ACCURACY, LABEL_DOUBLE, "scoreByAlignabilityAccuracy");
627  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_PRECISION_EXP, LABEL_DOUBLE, "scoreByAlignabilityPrecisionExp");
628  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_PRECISION_REF, LABEL_DOUBLE, "scoreByAlignabilityPrecisionRef");
629  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_ACCURACY_EXP, LABEL_DOUBLE, "scoreByAlignabilityAccuracyExp");
630  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_ACCURACY_REF, LABEL_DOUBLE, "scoreByAlignabilityAccuracyRef");
631 
632  MDL::addLabel(MDL_SCORE_BY_ALIGNABILITY_NOISE, LABEL_DOUBLE, "scoreByAlignabilityNoise");
633  MDL::addLabel(MDL_SCORE_BY_EMPTINESS, LABEL_DOUBLE, "scoreEmptiness");
634  MDL::addLabel(MDL_SCORE_BY_ENTROPY, LABEL_VECTOR_DOUBLE, "entropyFeatures");
635  MDL::addLabel(MDL_SCORE_BY_GRANULO, LABEL_VECTOR_DOUBLE, "granuloFeatures");
636  MDL::addLabel(MDL_SCORE_BY_HISTDIST, LABEL_VECTOR_DOUBLE, "histdistFeatures");
637  MDL::addLabel(MDL_SCORE_BY_LBP, LABEL_VECTOR_DOUBLE, "lbpFeatures");
638  MDL::addLabel(MDL_SCORE_BY_MIRROR, LABEL_DOUBLE, "scoreByMirror");
639  MDL::addLabel(MDL_SCORE_BY_RAMP, LABEL_VECTOR_DOUBLE, "rampCoefficients");
640  MDL::addLabel(MDL_SCORE_BY_SCREENING, LABEL_VECTOR_DOUBLE, "screenFeatures");
641  MDL::addLabel(MDL_SCORE_BY_VARIANCE, LABEL_VECTOR_DOUBLE, "varianceFeatures");
642  MDL::addLabel(MDL_SCORE_BY_VAR, LABEL_DOUBLE, "scoreByVariance");
643  MDL::addLabel(MDL_SCORE_BY_GINI, LABEL_DOUBLE, "scoreByGiniCoeff");
644  MDL::addLabel(MDL_SCORE_BY_ZERNIKE, LABEL_VECTOR_DOUBLE, "zernikeMoments");
645  MDL::addLabel(MDL_SCORE_BY_ZSCORE, LABEL_DOUBLE, "scoreByZScore");
646 
647  MDL::addLabelAlias(MDL_SCALE, "Scale");
648  MDL::addLabel(MDL_SELFILE, LABEL_STRING, "selfile", TAGLABEL_METADATA);
649  MDL::addLabel(MDL_SERIE, LABEL_STRING, "serie");
650 
651  MDL::addLabel(MDL_SHIFT_X, LABEL_DOUBLE, "shiftX");
652  MDL::addLabelAlias(MDL_SHIFT_X, "Xoff");
653  MDL::addLabel(MDL_SHIFT_X2, LABEL_DOUBLE, "shiftX2");
654  MDL::addLabel(MDL_SHIFT_X3, LABEL_DOUBLE, "shiftX3");
655  MDL::addLabel(MDL_SHIFT_X_DIFF, LABEL_DOUBLE, "shiftXDiff");
656  MDL::addLabel(MDL_SHIFT_Y, LABEL_DOUBLE, "shiftY");
657  MDL::addLabelAlias(MDL_SHIFT_Y, "Yoff");
658  MDL::addLabel(MDL_SHIFT_Y2, LABEL_DOUBLE, "shiftY2");
659  MDL::addLabel(MDL_SHIFT_Y3, LABEL_DOUBLE, "shiftY3");
660  MDL::addLabel(MDL_SHIFT_Y_DIFF, LABEL_DOUBLE, "shiftYDiff");
661  MDL::addLabel(MDL_SHIFT_Z, LABEL_DOUBLE, "shiftZ");
662  MDL::addLabel(MDL_SHIFT_Z2, LABEL_DOUBLE, "shiftZ2");
663  MDL::addLabel(MDL_SHIFT_Z3, LABEL_DOUBLE, "shiftZ3");
664  MDL::addLabelAlias(MDL_SHIFT_Z, "Zoff");
665  MDL::addLabel(MDL_SHIFT_DIFF0, LABEL_DOUBLE, "shiftDiff0");
666  MDL::addLabel(MDL_SHIFT_DIFF, LABEL_DOUBLE, "shiftDiff");
667  MDL::addLabel(MDL_SHIFT_DIFF2, LABEL_DOUBLE, "shiftDiff2");
668  MDL::addLabel(MDL_SIGMANOISE, LABEL_DOUBLE, "sigmaNoise");
669  MDL::addLabel(MDL_SIGMAOFFSET, LABEL_DOUBLE, "sigmaOffset");
670  MDL::addLabel(MDL_SIGNALCHANGE, LABEL_DOUBLE, "signalChange");
671  MDL::addLabel(MDL_SPH_COEFFICIENTS, LABEL_VECTOR_DOUBLE, "sphCoefficients");
672  MDL::addLabel(MDL_SPH_DEFORMATION, LABEL_DOUBLE, "sphDeformation");
673  MDL::addLabel(MDL_SPH_TSNE_COEFF1D, LABEL_DOUBLE, "sphTsne1D");
674  MDL::addLabel(MDL_SPH_TSNE_COEFF2D, LABEL_VECTOR_DOUBLE, "sphTsne2D");
675  MDL::addLabel(MDL_STDDEV, LABEL_DOUBLE, "stddev");
676  MDL::addLabel(MDL_STAR_COMMENT, LABEL_STRING, "starComment");
677  MDL::addLabel(MDL_SUBTRACTION_R2, LABEL_DOUBLE, "R2subtraction");
678  MDL::addLabel(MDL_SUBTRACTION_BETA0, LABEL_DOUBLE, "B0subtraction");
679  MDL::addLabel(MDL_SUBTRACTION_BETA1, LABEL_DOUBLE, "B1subtraction");
680  MDL::addLabel(MDL_SUM, LABEL_DOUBLE, "sum");
681  MDL::addLabel(MDL_SUMWEIGHT, LABEL_DOUBLE, "sumWeight");
682  MDL::addLabel(MDL_SYMNO, LABEL_INT, "symNo");
683 
684  MDL::addLabel(MDL_TOMOGRAM_VOLUME, LABEL_STRING, "tomogramVolume", TAGLABEL_IMAGE);
685  MDL::addLabel(MDL_TOMOGRAMMD, LABEL_STRING, "tomogramMetadata", TAGLABEL_METADATA);
686  MDL::addLabel(MDL_TSID, LABEL_STRING, "tiltSeriesId");
687 
688  MDL::addLabel(MDL_TRANSFORM_MATRIX, LABEL_STRING, "transformMatrix");
689 
690  MDL::addLabel(MDL_TEST_SIZE, LABEL_INT, "testSize");
691 
692  MDL::addLabel(MDL_VOLUME_SCORE_SUM, LABEL_DOUBLE, "volScoreSum");
693  MDL::addLabel(MDL_VOLUME_SCORE_MEAN, LABEL_DOUBLE, "volScoreMean");
694  MDL::addLabel(MDL_VOLUME_SCORE_MIN, LABEL_DOUBLE, "volScoreMin");
695  MDL::addLabel(MDL_VOLUME_SCORE_SUM_TH, LABEL_DOUBLE, "volScoreSumTh");
696  MDL::addLabel(MDL_VOLUME_SCORE1, LABEL_DOUBLE, "volScore1");
697  MDL::addLabel(MDL_VOLUME_SCORE2, LABEL_DOUBLE, "volScore2");
698  MDL::addLabel(MDL_VOLUME_SCORE3, LABEL_DOUBLE, "volScore3");
699  MDL::addLabel(MDL_VOLUME_SCORE4, LABEL_DOUBLE, "volScore4");
700  MDL::addLabel(MDL_WEIGHT, LABEL_DOUBLE, "weight");
701  MDL::addLabel(MDL_WEIGHT_P, LABEL_DOUBLE, "weight_clusterability");
702  MDL::addLabelAlias(MDL_WEIGHT, "Weight");
703  MDL::addLabel(MDL_WEIGHT_CONTINUOUS2, LABEL_DOUBLE, "weightContinuous2");
704  MDL::addLabel(MDL_WEIGHT_JUMPER0, LABEL_DOUBLE, "weightJumper0");
705  MDL::addLabel(MDL_WEIGHT_JUMPER, LABEL_DOUBLE, "weightJumper");
706  MDL::addLabel(MDL_WEIGHT_JUMPER2, LABEL_DOUBLE, "weightJumper2");
707  MDL::addLabel(MDL_WEIGHT_REALCORR, LABEL_DOUBLE, "weightRealCorr");
708  MDL::addLabel(MDL_WEIGHT_PHASECORR, LABEL_DOUBLE, "weightPhaseCorr");
709  MDL::addLabel(MDL_WEIGHT_SIGNIFICANT, LABEL_DOUBLE, "weightSignificant");
710  MDL::addLabel(MDL_WEIGHT_SSNR, LABEL_DOUBLE, "weightSSNR");
711 
712  MDL::addLabel(MDL_WEIGHT_PRECISION_ALIGNABILITY, LABEL_DOUBLE, "weightPrecisionAlignability");
713  MDL::addLabel(MDL_WEIGHT_ACCURACY_ALIGNABILITY, LABEL_DOUBLE, "weightAccuracyAlignability");
714  MDL::addLabel(MDL_WEIGHT_ALIGNABILITY, LABEL_DOUBLE, "weightAlignability");
715  MDL::addLabel(MDL_WEIGHT_PRECISION_MIRROR, LABEL_DOUBLE, "weightPrecisionMirror");
716 
717  MDL::addLabel(MDL_WROBUST, LABEL_DOUBLE, "wRobust");
718  MDL::addLabel(MDL_XCOOR, LABEL_INT, "xcoor");
719  MDL::addLabel(MDL_XCOOR_TILT, LABEL_INT, "xcoorTilt");
720 
721  MDL::addLabel(MDL_X, LABEL_DOUBLE, "x");
722  MDL::addLabel(MDL_XSIZE, LABEL_SIZET, "xSize");
723  MDL::addLabel(MDL_YCOOR, LABEL_INT, "ycoor");
724  MDL::addLabel(MDL_YCOOR_TILT, LABEL_INT, "ycoorTilt");
725  MDL::addLabel(MDL_Y, LABEL_DOUBLE, "y");
726  MDL::addLabel(MDL_YSIZE, LABEL_SIZET, "ySize");
727  MDL::addLabel(MDL_ZCOOR, LABEL_INT, "zcoor");
728  MDL::addLabel(MDL_Z, LABEL_DOUBLE, "z");
729  MDL::addLabel(MDL_ZSCORE, LABEL_DOUBLE, "zScore");
730  MDL::addLabel(MDL_ZSCORE_HISTOGRAM, LABEL_DOUBLE, "zScoreHistogram");
731  MDL::addLabel(MDL_ZSCORE_RESMEAN, LABEL_DOUBLE, "zScoreResMean");
732  MDL::addLabel(MDL_ZSCORE_RESVAR, LABEL_DOUBLE, "zScoreResVar");
733  MDL::addLabel(MDL_ZSCORE_RESCOV, LABEL_DOUBLE, "zScoreResCov");
734  MDL::addLabel(MDL_ZSCORE_SHAPE1, LABEL_DOUBLE, "zScoreShape1");
735  MDL::addLabel(MDL_ZSCORE_SHAPE2, LABEL_DOUBLE, "zScoreShape2");
736  MDL::addLabel(MDL_ZSCORE_SNR1, LABEL_DOUBLE, "zScoreSNR1");
737  MDL::addLabel(MDL_ZSCORE_SNR2, LABEL_DOUBLE, "zScoreSNR2");
738  MDL::addLabel(MDL_ZSCORE_DEEPLEARNING1, LABEL_DOUBLE, "zScoreDeepLearning1");
739  MDL::addLabel(MDL_GOOD_REGION_SCORE, LABEL_DOUBLE, "goodRegionScore");
740  MDL::addLabel(MDL_ZSIZE, LABEL_SIZET, "zSize");
741 
742  MDL::addLabelAlias(MDL_XCOOR, "Xcoor");//3.0
743  MDL::addLabelAlias(MDL_XCOOR, "<X position>");
744  MDL::addLabelAlias(MDL_XCOOR_TILT, "XcoorTilt");//3.0
745 
746  MDL::addLabelAlias(MDL_X, "X"); //3.0
747  MDL::addLabelAlias(MDL_XSIZE, "Xsize"); //3.0
748  MDL::addLabelAlias(MDL_YCOOR, "Ycoor"); //3.0
749  MDL::addLabelAlias(MDL_YCOOR, "<Y position>");
750  MDL::addLabelAlias(MDL_YCOOR_TILT, "YcoorTilt"); //3.0
751  MDL::addLabelAlias(MDL_Y, "Y"); //3.0
752  MDL::addLabelAlias(MDL_YSIZE, "Ysize"); //3.0
753  MDL::addLabelAlias(MDL_ZCOOR, "Zcoor"); //3.0
754  MDL::addLabelAlias(MDL_Z, "Z"); //3.0
755  MDL::addLabelAlias(MDL_ZSCORE, "Zscore"); //3.0
756  MDL::addLabelAlias(MDL_ZSIZE, "Zsize"); //3.0
757 
758 
759  /*Relion labels */
760  MDL::addLabel(RLN_AREA_ID, LABEL_SIZET, "rlnAreaId");
761  MDL::addLabel(RLN_AREA_NAME, LABEL_STRING, "rlnAreaName");
762 
763  MDL::addLabel(RLN_CTF_BFACTOR, LABEL_DOUBLE, "rlnBfactor");
764  MDL::addLabel(RLN_CTF_SCALEFACTOR, LABEL_DOUBLE, "rlnCtfScalefactor");
765  MDL::addLabel(RLN_CTF_VOLTAGE, LABEL_DOUBLE, "rlnVoltage");
766  MDL::addLabel(RLN_CTF_DEFOCUSU, LABEL_DOUBLE, "rlnDefocusU");
767  MDL::addLabel(RLN_CTF_DEFOCUSV, LABEL_DOUBLE, "rlnDefocusV");
768  MDL::addLabel(RLN_CTF_DEFOCUS_ANGLE, LABEL_DOUBLE, "rlnDefocusAngle");
769  MDL::addLabel(RLN_CTF_CS, LABEL_DOUBLE, "rlnSphericalAberration");
770  MDL::addLabel(RLN_CTF_CA, LABEL_DOUBLE, "rlnChromaticAberration");
771  MDL::addLabel(RLN_CTF_DETECTOR_PIXEL_SIZE, LABEL_DOUBLE, "rlnDetectorPixelSize");
772  MDL::addLabel(RLN_CTF_ENERGY_LOSS, LABEL_DOUBLE, "rlnEnergyLoss");
773  MDL::addLabel(RLN_CTF_FOM, LABEL_DOUBLE, "rlnCtfFigureOfMerit");
774  MDL::addLabel(RLN_CTF_IMAGE, LABEL_STRING, "rlnCtfImage", TAGLABEL_IMAGE);
775  MDL::addLabel(RLN_CTF_LENS_STABILITY, LABEL_DOUBLE, "rlnLensStability");
776  MDL::addLabel(RLN_CTF_MAGNIFICATION, LABEL_DOUBLE, "rlnMagnification");
777  MDL::addLabel(RLN_CTF_MAXRES, LABEL_DOUBLE, "rlnCtfMaxResolution");
778  MDL::addLabel(RLN_CTF_CONVERGENCE_CONE, LABEL_DOUBLE, "rlnConvergenceCone");
779  MDL::addLabel(RLN_CTF_LONGITUDINAL_DISPLACEMENT, LABEL_DOUBLE, "rlnLongitudinalDisplacement");
780  MDL::addLabel(RLN_CTF_TRANSVERSAL_DISPLACEMENT, LABEL_DOUBLE, "rlnTransversalDisplacement");
781  MDL::addLabel(RLN_CTF_Q0, LABEL_DOUBLE, "rlnAmplitudeContrast");
782  MDL::addLabel(RLN_CTF_VALIDATIONSCORE, LABEL_DOUBLE, "rlnCtfValidationScore");
783  MDL::addLabel(RLN_CTF_VALUE, LABEL_DOUBLE, "rlnCtfValue");
784  MDL::addLabel(RLN_CTF_PHASESHIFT, LABEL_DOUBLE, "rlnPhaseShift");
785 
786  MDL::addLabel(RLN_IMAGE_NAME, LABEL_STRING, "rlnImageName", TAGLABEL_IMAGE);
787  MDL::addLabel(RLN_IMAGE_RECONSTRUCT_NAME, LABEL_STRING, "rlnReconstructImageName", TAGLABEL_IMAGE);
788  MDL::addLabel(RLN_IMAGE_ID, LABEL_SIZET, "rlnImageId");
789  MDL::addLabel(RLN_IMAGE_ENABLED, LABEL_BOOL, "rlnEnabled");
790  MDL::addLabel(RLN_IMAGE_DATATYPE, LABEL_INT, "rlnDataType");
791  // Label rlnImageDimensionality is originally rlnDataDimensionality, which is
792  // duplicated for other label. A relion bug???
793  MDL::addLabel(RLN_IMAGE_DIMENSIONALITY, LABEL_INT, "rlnImageDimensionality");
794  MDL::addLabel(RLN_IMAGE_BEAMTILT_X, LABEL_DOUBLE, "rlnBeamTiltX");
795  MDL::addLabel(RLN_IMAGE_BEAMTILT_Y, LABEL_DOUBLE, "rlnBeamTiltY");
796  MDL::addLabel(RLN_IMAGE_BEAMTILT_GROUP, LABEL_STRING, "rlnBeamTiltGroupName");
797  MDL::addLabel(RLN_IMAGE_COORD_X, LABEL_DOUBLE, "rlnCoordinateX");
798  MDL::addLabel(RLN_IMAGE_COORD_Y, LABEL_DOUBLE, "rlnCoordinateY");
799  MDL::addLabel(RLN_IMAGE_COORD_Z, LABEL_DOUBLE, "rlnCoordinateZ");
800  MDL::addLabel(RLN_IMAGE_FRAME_NR, LABEL_INT, "rlnMovieFrameNumber");
801  MDL::addLabel(RLN_IMAGE_MAGNIFICATION_CORRECTION, LABEL_DOUBLE, "rlnMagnificationCorrection");
802  MDL::addLabel(RLN_IMAGE_NORM_CORRECTION, LABEL_DOUBLE, "rlnNormCorrection");
803  MDL::addLabel(RLN_IMAGE_ORI_NAME, LABEL_STRING, "rlnImageOriginalName", TAGLABEL_IMAGE);
804  MDL::addLabel(RLN_IMAGE_SAMPLINGRATE, LABEL_DOUBLE, "rlnSamplingRate");
805  MDL::addLabel(RLN_IMAGE_SAMPLINGRATE_X, LABEL_DOUBLE, "rlnSamplingRateX");
806  MDL::addLabel(RLN_IMAGE_SAMPLINGRATE_Y, LABEL_DOUBLE, "rlnSamplingRateY");
807  MDL::addLabel(RLN_IMAGE_SAMPLINGRATE_Z, LABEL_DOUBLE, "rlnSamplingRateZ");
808  MDL::addLabel(RLN_IMAGE_SIZE, LABEL_INT, "rlnImageSize");
809  MDL::addLabel(RLN_IMAGE_SIZEX, LABEL_INT, "rlnImageSizeX");
810  MDL::addLabel(RLN_IMAGE_SIZEY, LABEL_INT, "rlnImageSizeY");
811  MDL::addLabel(RLN_IMAGE_SIZEZ, LABEL_INT, "rlnImageSizeZ");
812  MDL::addLabel(RLN_IMAGE_STATS_MIN, LABEL_DOUBLE, "rlnMinimumValue");
813  MDL::addLabel(RLN_IMAGE_STATS_MAX, LABEL_DOUBLE, "rlnMaximumValue");
814  MDL::addLabel(RLN_IMAGE_STATS_AVG, LABEL_DOUBLE, "rlnAverageValue");
815  MDL::addLabel(RLN_IMAGE_STATS_STDDEV, LABEL_DOUBLE, "rlnStandardDeviationValue");
816  MDL::addLabel(RLN_IMAGE_STATS_SKEW, LABEL_DOUBLE, "rlnSkewnessValue");
817  MDL::addLabel(RLN_IMAGE_STATS_KURT, LABEL_DOUBLE, "rlnKurtosisExcessValue");
818  MDL::addLabel(RLN_IMAGE_WEIGHT, LABEL_DOUBLE, "rlnImageWeight");
819 
820  MDL::addLabel(RLN_MASK_NAME, LABEL_STRING, "rlnMaskName");
821 
822  MDL::addLabel(RLN_MATRIX_1_1, LABEL_DOUBLE, "rlnMatrix_1_1");
823  MDL::addLabel(RLN_MATRIX_1_2, LABEL_DOUBLE, "rlnMatrix_1_2");
824  MDL::addLabel(RLN_MATRIX_1_3, LABEL_DOUBLE, "rlnMatrix_1_3");
825  MDL::addLabel(RLN_MATRIX_2_1, LABEL_DOUBLE, "rlnMatrix_2_1");
826  MDL::addLabel(RLN_MATRIX_2_2, LABEL_DOUBLE, "rlnMatrix_2_2");
827  MDL::addLabel(RLN_MATRIX_2_3, LABEL_DOUBLE, "rlnMatrix_2_3");
828  MDL::addLabel(RLN_MATRIX_3_1, LABEL_DOUBLE, "rlnMatrix_3_1");
829  MDL::addLabel(RLN_MATRIX_3_2, LABEL_DOUBLE, "rlnMatrix_3_2");
830  MDL::addLabel(RLN_MATRIX_3_3, LABEL_DOUBLE, "rlnMatrix_3_3");
831 
832  MDL::addLabel(RLN_MICROGRAPH_ID, LABEL_SIZET, "rlnMicrographId");
833  MDL::addLabel(RLN_MICROGRAPH_MOVIE_NAME, LABEL_STRING, "rlnMicrographMovieName", TAGLABEL_IMAGE);
834  MDL::addLabel(RLN_MICROGRAPH_NAME, LABEL_STRING, "rlnMicrographName", TAGLABEL_IMAGE);
835  MDL::addLabel(RLN_MICROGRAPH_NAME_WODOSE, LABEL_STRING, "rlnMicrographNameNoDW", TAGLABEL_IMAGE);
836  MDL::addLabel(RLN_MICROGRAPH_TILT_ANGLE, LABEL_DOUBLE, "rlnMicrographTiltAngle");
837  MDL::addLabel(RLN_MICROGRAPH_TILT_AXIS_DIRECTION, LABEL_DOUBLE, "rlnMicrographTiltAxisDirection");
838  MDL::addLabel(RLN_MICROGRAPH_TILT_AXIS_OUTOFPLANE, LABEL_DOUBLE, "rlnMicrographTiltAxisOutOfPlane");
839 
840  MDL::addLabel(RLN_MLMODEL_ACCURACY_ROT, LABEL_DOUBLE, "rlnAccuracyRotations");
841  MDL::addLabel(RLN_MLMODEL_ACCURACY_TRANS, LABEL_DOUBLE, "rlnAccuracyTranslations");
842  MDL::addLabel(RLN_MLMODEL_AVE_PMAX, LABEL_DOUBLE, "rlnAveragePmax");
843  MDL::addLabel(RLN_MLMODEL_CURRENT_RESOLUTION, LABEL_DOUBLE, "rlnCurrentResolution");
844  MDL::addLabel(RLN_MLMODEL_CURRENT_SIZE, LABEL_INT, "rlnCurrentImageSize");
845  MDL::addLabel(RLN_MLMODEL_DATA_VS_PRIOR_REF, LABEL_DOUBLE, "rlnSsnrMap");
846  MDL::addLabel(RLN_MLMODEL_DIMENSIONALITY, LABEL_INT, "rlnReferenceDimensionality");
847  MDL::addLabel(RLN_MLMODEL_DIMENSIONALITY_DATA, LABEL_INT, "rlnDataDimensionality");
848  MDL::addLabel(RLN_MLMODEL_DIFF2_HALVES_REF, LABEL_DOUBLE, "rlnDiff2RandomHalves");
849  MDL::addLabel(RLN_MLMODEL_ESTIM_RESOL_REF, LABEL_DOUBLE, "rlnEstimatedResolution");
850  MDL::addLabel(RLN_MLMODEL_FOURIER_COVERAGE_REF, LABEL_DOUBLE, "rlnFourierCompleteness");
851  MDL::addLabel(RLN_MLMODEL_FOURIER_COVERAGE_TOTAL_REF, LABEL_DOUBLE, "rlnOverallFourierCompleteness");
852  MDL::addLabel(RLN_MLMODEL_FSC_HALVES_REF, LABEL_DOUBLE, "rlnGoldStandardFsc");
853  MDL::addLabel(RLN_MLMODEL_GROUP_NAME, LABEL_STRING, "rlnGroupName");
854  MDL::addLabel(RLN_MLMODEL_GROUP_NO, LABEL_SIZET, "rlnGroupNumber");
855  MDL::addLabel(RLN_MLMODEL_GROUP_NR_PARTICLES, LABEL_SIZET, "rlnGroupNrParticles");
856  MDL::addLabel(RLN_MLMODEL_GROUP_SCALE_CORRECTION, LABEL_DOUBLE, "rlnGroupScaleCorrection");
857  MDL::addLabel(RLN_MLMODEL_HELICAL_NR_ASU, LABEL_INT, "rlnNrHelicalAsymUnits");
858  MDL::addLabel(RLN_MLMODEL_HELICAL_TWIST, LABEL_DOUBLE, "rlnHelicalTwist");
859  MDL::addLabel(RLN_MLMODEL_HELICAL_TWIST_MIN, LABEL_DOUBLE, "rlnHelicalTwistMin");
860  MDL::addLabel(RLN_MLMODEL_HELICAL_TWIST_MAX, LABEL_DOUBLE, "rlnHelicalTwistMax");
861  MDL::addLabel(RLN_MLMODEL_HELICAL_TWIST_INITIAL_STEP, LABEL_DOUBLE, "rlnHelicalTwistInitialStep");
862  MDL::addLabel(RLN_MLMODEL_HELICAL_RISE, LABEL_DOUBLE, "rlnHelicalRise");
863  MDL::addLabel(RLN_MLMODEL_HELICAL_RISE_MIN, LABEL_DOUBLE, "rlnHelicalRiseMin");
864  MDL::addLabel(RLN_MLMODEL_HELICAL_RISE_MAX, LABEL_DOUBLE, "rlnHelicalRiseMax");
865  MDL::addLabel(RLN_MLMODEL_HELICAL_RISE_INITIAL_STEP, LABEL_DOUBLE, "rlnHelicalRiseInitialStep");
866  MDL::addLabel(RLN_MLMODEL_INTERPOLATOR, LABEL_INT, "rlnFourierSpaceInterpolator");
867  MDL::addLabel(RLN_MLMODEL_IS_HELIX, LABEL_BOOL, "rlnIsHelix");
868  MDL::addLabel(RLN_MLMODEL_LL, LABEL_DOUBLE, "rlnLogLikelihood");
869  MDL::addLabel(RLN_MLMODEL_MINIMUM_RADIUS_NN_INTERPOLATION, LABEL_INT, "rlnMinRadiusNnInterpolation");
870  MDL::addLabel(RLN_MLMODEL_NORM_CORRECTION_AVG, LABEL_DOUBLE, "rlnNormCorrectionAverage");
871  MDL::addLabel(RLN_MLMODEL_NR_BODIES, LABEL_INT, "rlnNrBodies");
872  MDL::addLabel(RLN_MLMODEL_NR_CLASSES, LABEL_INT, "rlnNrClasses");
873  MDL::addLabel(RLN_MLMODEL_NR_GROUPS, LABEL_INT, "rlnNrGroups");
874  MDL::addLabel(RLN_MLMODEL_ORIENTABILITY_CONTRIBUTION, LABEL_DOUBLE, "rlnSpectralOrientabilityContribution");
875  MDL::addLabel(RLN_MLMODEL_ORIGINAL_SIZE, LABEL_INT, "rlnOriginalImageSize");
876  MDL::addLabel(RLN_MLMODEL_PADDING_FACTOR, LABEL_DOUBLE, "rlnPaddingFactor");
877  MDL::addLabel(RLN_MLMODEL_PDF_CLASS, LABEL_DOUBLE, "rlnClassDistribution");
878  MDL::addLabel(RLN_MLMODEL_PRIOR_OFFX_CLASS, LABEL_DOUBLE, "rlnClassPriorOffsetX");
879  MDL::addLabel(RLN_MLMODEL_PRIOR_OFFY_CLASS, LABEL_DOUBLE, "rlnClassPriorOffsetY");
880  MDL::addLabel(RLN_MLMODEL_PDF_ORIENT, LABEL_DOUBLE, "rlnOrientationDistribution");
881  MDL::addLabel(RLN_MLMODEL_PIXEL_SIZE, LABEL_DOUBLE, "rlnPixelSize");
882  MDL::addLabel(RLN_MLMODEL_POWER_REF, LABEL_DOUBLE, "rlnReferenceSpectralPower");
883  MDL::addLabel(RLN_MLMODEL_PRIOR_MODE, LABEL_INT, "rlnOrientationalPriorMode");
884  MDL::addLabel(RLN_MLMODEL_REF_IMAGE, LABEL_STRING, "rlnReferenceImage", TAGLABEL_IMAGE);
885  MDL::addLabel(RLN_MLMODEL_SGD_GRADIENT_IMAGE, LABEL_STRING, "rlnSGDGradientImage");
886  MDL::addLabel(RLN_MLMODEL_SIGMA_OFFSET, LABEL_DOUBLE, "rlnSigmaOffsets");
887  MDL::addLabel(RLN_MLMODEL_SIGMA2_NOISE, LABEL_DOUBLE, "rlnSigma2Noise");
888  MDL::addLabel(RLN_MLMODEL_SIGMA2_REF, LABEL_DOUBLE, "rlnReferenceSigma2");
889  MDL::addLabel(RLN_MLMODEL_SIGMA_ROT, LABEL_DOUBLE, "rlnSigmaPriorRotAngle");
890  MDL::addLabel(RLN_MLMODEL_SIGMA_TILT, LABEL_DOUBLE, "rlnSigmaPriorTiltAngle");
891  MDL::addLabel(RLN_MLMODEL_SIGMA_PSI, LABEL_DOUBLE, "rlnSigmaPriorPsiAngle");
892  MDL::addLabel(RLN_MLMODEL_SSNR_REF, LABEL_DOUBLE, "rlnSignalToNoiseRatio");
893  MDL::addLabel(RLN_MLMODEL_TAU2_FUDGE_FACTOR, LABEL_DOUBLE, "rlnTau2FudgeFactor");
894  MDL::addLabel(RLN_MLMODEL_TAU2_REF, LABEL_DOUBLE, "rlnReferenceTau2");
895 
896  MDL::addLabel(RLN_OPTIMISER_ACCURACY_ROT, LABEL_DOUBLE, "rlnOverallAccuracyRotations");
897  MDL::addLabel(RLN_OPTIMISER_ACCURACY_TRANS, LABEL_DOUBLE, "rlnOverallAccuracyTranslations");
898  MDL::addLabel(RLN_OPTIMISER_ADAPTIVE_FRACTION, LABEL_DOUBLE, "rlnAdaptiveOversampleFraction");
899  MDL::addLabel(RLN_OPTIMISER_ADAPTIVE_OVERSAMPLING, LABEL_INT, "rlnAdaptiveOversampleOrder");
900  MDL::addLabel(RLN_OPTIMISER_AUTO_LOCAL_HP_ORDER, LABEL_INT, "rlnAutoLocalSearchesHealpixOrder");
901  MDL::addLabel(RLN_OPTIMISER_AVAILABLE_MEMORY, LABEL_DOUBLE, "rlnAvailableMemory");
902  MDL::addLabel(RLN_OPTIMISER_BEST_RESOL_THUS_FAR, LABEL_DOUBLE, "rlnBestResolutionThusFar");
903  MDL::addLabel(RLN_OPTIMISER_COARSE_SIZE, LABEL_INT, "rlnCoarseImageSize");
904  MDL::addLabel(RLN_OPTIMISER_CHANGES_OPTIMAL_OFFSETS, LABEL_DOUBLE, "rlnChangesOptimalOffsets");
905  MDL::addLabel(RLN_OPTIMISER_CHANGES_OPTIMAL_ORIENTS, LABEL_DOUBLE, "rlnChangesOptimalOrientations");
906  MDL::addLabel(RLN_OPTIMISER_CHANGES_OPTIMAL_CLASSES, LABEL_DOUBLE, "rlnChangesOptimalClasses");
907  MDL::addLabel(RLN_OPTIMISER_DATA_ARE_CTF_PHASE_FLIPPED, LABEL_BOOL, "rlnCtfDataArePhaseFlipped");
908  MDL::addLabel(RLN_OPTIMISER_DATA_ARE_CTF_PREMULTIPLIED, LABEL_BOOL, "rlnCtfDataAreCtfPremultiplied");
909  MDL::addLabel(RLN_OPTIMISER_DATA_STARFILE, LABEL_STRING, "rlnExperimentalDataStarFile", TAGLABEL_METADATA);
910  MDL::addLabel(RLN_OPTIMISER_DO_AUTO_REFINE, LABEL_BOOL, "rlnDoAutoRefine");
911  MDL::addLabel(RLN_OPTIMISER_DO_CORRECT_CTF, LABEL_BOOL, "rlnDoCorrectCtf");
912  MDL::addLabel(RLN_OPTIMISER_DO_CORRECT_MAGNIFICATION, LABEL_BOOL, "rlnDoCorrectMagnification");
913  MDL::addLabel(RLN_OPTIMISER_DO_CORRECT_NORM, LABEL_BOOL, "rlnDoCorrectNorm");
914  MDL::addLabel(RLN_OPTIMISER_DO_CORRECT_SCALE, LABEL_BOOL, "rlnDoCorrectScale");
915  MDL::addLabel(RLN_OPTIMISER_DO_HELICAL_REFINE, LABEL_BOOL, "rlnDoHelicalRefine");
916  MDL::addLabel(RLN_OPTIMISER_DO_MAP, LABEL_BOOL, "rlnDoMapEstimation");
917  MDL::addLabel(RLN_OPTIMISER_DO_ONLY_FLIP_CTF_PHASES, LABEL_BOOL, "rlnDoOnlyFlipCtfPhases");
918  MDL::addLabel(RLN_OPTIMISER_DO_REALIGN_MOVIES, LABEL_BOOL, "rlnDoRealignMovies");
919  MDL::addLabel(RLN_OPTIMISER_DO_SGD, LABEL_BOOL, "rlnDoStochasticGradientDescent");
920  MDL::addLabel(RLN_OPTIMISER_DO_SOLVENT_FLATTEN, LABEL_BOOL, "rlnDoSolventFlattening");
921  MDL::addLabel(RLN_OPTIMISER_DO_SKIP_ALIGN, LABEL_BOOL, "rlnDoSkipAlign");
922  MDL::addLabel(RLN_OPTIMISER_DO_SKIP_ROTATE, LABEL_BOOL, "rlnDoSkipRotate");
923  MDL::addLabel(RLN_OPTIMISER_DO_SPLIT_RANDOM_HALVES, LABEL_BOOL, "rlnDoSplitRandomHalves");
924  MDL::addLabel(RLN_OPTIMISER_DO_ZERO_MASK, LABEL_BOOL, "rlnDoZeroMask");
925  MDL::addLabel(RLN_OPTIMISER_FIX_SIGMA_NOISE, LABEL_BOOL, "rlnFixSigmaNoiseEstimates");
926  MDL::addLabel(RLN_OPTIMISER_FIX_SIGMA_OFFSET ,LABEL_BOOL, "rlnFixSigmaOffsetEstimates");
927  MDL::addLabel(RLN_OPTIMISER_FIX_TAU, LABEL_BOOL, "rlnFixTauEstimates");
928  MDL::addLabel(RLN_OPTIMISER_HAS_CONVERGED, LABEL_BOOL, "rlnHasConverged");
929  MDL::addLabel(RLN_OPTIMISER_HAS_HIGH_FSC_AT_LIMIT, LABEL_BOOL, "rlnHasHighFscAtResolLimit");
930  MDL::addLabel(RLN_OPTIMISER_HAS_LARGE_INCR_SIZE_ITER_AGO, LABEL_INT, "rlnHasLargeSizeIncreaseIterationsAgo");
931  MDL::addLabel(RLN_OPTIMISER_HELICAL_TWIST_INITIAL, LABEL_DOUBLE, "rlnHelicalTwistInitial");
932  MDL::addLabel(RLN_OPTIMISER_HELICAL_RISE_INITIAL, LABEL_DOUBLE, "rlnHelicalRiseInitial");
933  MDL::addLabel(RLN_OPTIMISER_HELICAL_Z_PERCENTAGE, LABEL_DOUBLE, "rlnHelicalCentralProportion");
934  MDL::addLabel(RLN_OPTIMISER_HELICAL_TUBE_INNER_DIAMETER, LABEL_DOUBLE, "rlnHelicalMaskTubeInnerDiameter");
935  MDL::addLabel(RLN_OPTIMISER_HELICAL_TUBE_OUTER_DIAMETER, LABEL_DOUBLE, "rlnHelicalMaskTubeOuterDiameter");
936  MDL::addLabel(RLN_OPTIMISER_HELICAL_SYMMETRY_LOCAL_REFINEMENT, LABEL_BOOL, "rlnHelicalSymmetryLocalRefinement");
937  MDL::addLabel(RLN_OPTIMISER_HELICAL_SIGMA_DISTANCE, LABEL_DOUBLE, "rlnHelicalSigmaDistance");
938  MDL::addLabel(RLN_OPTIMISER_IGNORE_HELICAL_SYMMETRY, LABEL_BOOL, "rlnIgnoreHelicalSymmetry");
939  MDL::addLabel(RLN_OPTIMISER_HELICAL_KEEP_TILT_PRIOR_FIXED, LABEL_BOOL, "rlnHelicalKeepTiltPriorFixed");
940  MDL::addLabel(RLN_OPTIMISER_HIGHRES_LIMIT_EXP, LABEL_DOUBLE, "rlnHighresLimitExpectation");
941  MDL::addLabel(RLN_OPTIMISER_HIGHRES_LIMIT_SGD, LABEL_DOUBLE, "rlnHighresLimitSGD");
942  MDL::addLabel(RLN_OPTIMISER_IGNORE_CTF_UNTIL_FIRST_PEAK, LABEL_BOOL, "rlnDoIgnoreCtfUntilFirstPeak");
943  MDL::addLabel(RLN_OPTIMISER_INCR_SIZE, LABEL_INT, "rlnIncrementImageSize");
944  MDL::addLabel(RLN_OPTIMISER_ITERATION_NO, LABEL_INT, "rlnCurrentIteration");
945  MDL::addLabel(RLN_OPTIMISER_LOCAL_SYMMETRY_FILENAME, LABEL_STRING, "rlnLocalSymmetryFile");
946  MDL::addLabel(RLN_OPTIMISER_LOWRES_JOIN_RANDOM_HALVES, LABEL_DOUBLE, "rlnJoinHalvesUntilThisResolution");
947  MDL::addLabel(RLN_OPTIMISER_MAGNIFICATION_RANGE, LABEL_DOUBLE, "rlnMagnificationSearchRange");
948  MDL::addLabel(RLN_OPTIMISER_MAGNIFICATION_STEP, LABEL_DOUBLE, "rlnMagnificationSearchStep");
949  MDL::addLabel(RLN_OPTIMISER_MAX_COARSE_SIZE, LABEL_INT, "rlnMaximumCoarseImageSize");
950  MDL::addLabel(RLN_OPTIMISER_MAX_NR_POOL, LABEL_INT, "rlnMaxNumberOfPooledParticles");
951  MDL::addLabel(RLN_OPTIMISER_MODEL_STARFILE, LABEL_STRING, "rlnModelStarFile", TAGLABEL_METADATA);
952  MDL::addLabel(RLN_OPTIMISER_MODEL_STARFILE2, LABEL_STRING, "rlnModelStarFile2", TAGLABEL_METADATA);
953  MDL::addLabel(RLN_OPTIMISER_NR_ITERATIONS, LABEL_INT, "rlnNumberOfIterations");
954  MDL::addLabel(RLN_OPTIMISER_NR_ITER_WO_RESOL_GAIN, LABEL_INT, "rlnNumberOfIterWithoutResolutionGain");
955  MDL::addLabel(RLN_OPTIMISER_NR_ITER_WO_HIDDEN_VAR_CHANGES, LABEL_INT, "rlnNumberOfIterWithoutChangingAssignments");
956  MDL::addLabel(RLN_OPTIMISER_OUTPUT_ROOTNAME, LABEL_STRING, "rlnOutputRootName");
957  MDL::addLabel(RLN_OPTIMISER_PARTICLE_DIAMETER, LABEL_DOUBLE, "rlnParticleDiameter");
958  MDL::addLabel(RLN_OPTIMISER_RADIUS_MASK_3D_MAP, LABEL_INT, "rlnRadiusMaskMap");
959  MDL::addLabel(RLN_OPTIMISER_RADIUS_MASK_EXP_PARTICLES, LABEL_INT, "rlnRadiusMaskExpImages");
960  MDL::addLabel(RLN_OPTIMISER_RANDOM_SEED, LABEL_INT, "rlnRandomSeed");
961  MDL::addLabel(RLN_OPTIMISER_REFS_ARE_CTF_CORRECTED, LABEL_BOOL, "rlnRefsAreCtfCorrected");
962  MDL::addLabel(RLN_OPTIMISER_SGD_MU, LABEL_DOUBLE, "rlnSgdMuFactor");
963  MDL::addLabel(RLN_OPTIMISER_SGD_SIGMA2FUDGE_INI, LABEL_DOUBLE, "rlnSgdSigma2FudgeInitial");
964  MDL::addLabel(RLN_OPTIMISER_SGD_SIGMA2FUDGE_HALFLIFE, LABEL_SIZET, "rlnSgdSigma2FudgeHalflife");
965  MDL::addLabel(RLN_OPTIMISER_SGD_SUBSET_START, LABEL_INT, "rlnSgdNextSubset");
966  MDL::addLabel(RLN_OPTIMISER_SGD_SUBSET_SIZE, LABEL_SIZET, "rlnSgdSubsetSize");
967  MDL::addLabel(RLN_OPTIMISER_SGD_WRITE_EVERY_SUBSET, LABEL_INT, "rlnSgdWriteEverySubset");
968  MDL::addLabel(RLN_OPTIMISER_SGD_MAX_SUBSETS, LABEL_SIZET, "rlnSgdMaxSubsets");
969  MDL::addLabel(RLN_OPTIMISER_SGD_STEPSIZE, LABEL_DOUBLE, "rlnSgdStepsize");
970 
971 
972  MDL::addLabel(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_CLASSES, LABEL_INT, "rlnSmallestChangesClasses");
973  MDL::addLabel(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_OFFSETS, LABEL_DOUBLE, "rlnSmallestChangesOffsets");
974  MDL::addLabel(RLN_OPTIMISER_SMALLEST_CHANGES_OPT_ORIENTS, LABEL_DOUBLE, "rlnSmallestChangesOrientations");
975  MDL::addLabel(RLN_OPTIMISER_SAMPLING_STARFILE, LABEL_STRING, "rlnOrientSamplingStarFile", TAGLABEL_METADATA);
976  MDL::addLabel(RLN_OPTIMISER_SOLVENT_MASK_NAME, LABEL_STRING, "rlnSolventMaskName", TAGLABEL_IMAGE);
977  MDL::addLabel(RLN_OPTIMISER_SOLVENT_MASK2_NAME, LABEL_STRING, "rlnSolventMask2Name", TAGLABEL_IMAGE);
978  MDL::addLabel(RLN_OPTIMISER_TAU_SPECTRUM_NAME, LABEL_STRING, "rlnTauSpectrumName");
979  MDL::addLabel(RLN_OPTIMISER_USE_TOO_COARSE_SAMPLING, LABEL_BOOL, "rlnUseTooCoarseSampling");
980  MDL::addLabel(RLN_OPTIMISER_WIDTH_MASK_EDGE, LABEL_INT, "rlnWidthMaskEdge");
981 
982  MDL::addLabel(RLN_ORIENT_FLIP, LABEL_BOOL, "rlnIsFlip");
983  MDL::addLabel(RLN_ORIENT_ID, LABEL_SIZET, "rlnOrientationsID");
984  MDL::addLabel(RLN_ORIENT_ORIGIN_X, LABEL_DOUBLE, "rlnOriginX");
985  MDL::addLabel(RLN_ORIENT_ORIGIN_X_PRIOR, LABEL_DOUBLE, "rlnOriginXPrior");
986  MDL::addLabel(RLN_ORIENT_ORIGIN_Y, LABEL_DOUBLE, "rlnOriginY");
987  MDL::addLabel(RLN_ORIENT_ORIGIN_Y_PRIOR, LABEL_DOUBLE, "rlnOriginYPrior");
988  MDL::addLabel(RLN_ORIENT_ORIGIN_Z, LABEL_DOUBLE, "rlnOriginZ");
989  MDL::addLabel(RLN_ORIENT_ORIGIN_Z_PRIOR, LABEL_DOUBLE, "rlnOriginZPrior");
990  MDL::addLabel(RLN_ORIENT_ROT, LABEL_DOUBLE, "rlnAngleRot");
991  MDL::addLabel(RLN_ORIENT_ROT_PRIOR, LABEL_DOUBLE, "rlnAngleRotPrior");
992  MDL::addLabel(RLN_ORIENT_TILT, LABEL_DOUBLE, "rlnAngleTilt");
993  MDL::addLabel(RLN_ORIENT_TILT_PRIOR, LABEL_DOUBLE, "rlnAngleTiltPrior");
994  MDL::addLabel(RLN_ORIENT_PSI, LABEL_DOUBLE, "rlnAnglePsi");
995  MDL::addLabel(RLN_ORIENT_PSI_PRIOR, LABEL_DOUBLE, "rlnAnglePsiPrior");
996  MDL::addLabel(RLN_ORIENT_PSI_PRIOR_FLIP_RATIO, LABEL_DOUBLE, "rlnAnglePsiFlipRatio");
997 
998  MDL::addLabel(RLN_PARTICLE_AUTOPICK_FOM, LABEL_DOUBLE, "rlnAutopickFigureOfMerit");
999  MDL::addLabel(RLN_PARTICLE_CLASS, LABEL_INT, "rlnClassNumber");
1000  MDL::addLabel(RLN_PARTICLE_DLL, LABEL_DOUBLE, "rlnLogLikeliContribution");
1001  MDL::addLabel(RLN_PARTICLE_ID, LABEL_SIZET, "rlnParticleId");
1002  MDL::addLabel(RLN_PARTICLE_FOM, LABEL_DOUBLE, "rlnParticleFigureOfMerit");
1003  MDL::addLabel(RLN_PARTICLE_HELICAL_TUBE_ID, LABEL_INT, "rlnHelicalTubeID");
1004  MDL::addLabel(RLN_PARTICLE_HELICAL_TUBE_PITCH, LABEL_DOUBLE, "rlnHelicalTubePitch");
1005  MDL::addLabel(RLN_PARTICLE_HELICAL_TRACK_LENGTH, LABEL_DOUBLE, "rlnHelicalTrackLength");
1006  MDL::addLabel(RLN_PARTICLE_KL_DIVERGENCE, LABEL_DOUBLE, "rlnKullbackLeibnerDivergence");
1007  MDL::addLabel(RLN_PARTICLE_MOVIE_RUNNING_AVG, LABEL_INT, "rlnMovieFramesRunningAverage");
1008  MDL::addLabel(RLN_PARTICLE_NAME, LABEL_STRING, "rlnParticleName", TAGLABEL_IMAGE);
1009  MDL::addLabel(RLN_PARTICLE_NR_SIGNIFICANT_SAMPLES, LABEL_INT, "rlnNrOfSignificantSamples");
1010  MDL::addLabel(RLN_PARTICLE_NR_FRAMES, LABEL_INT, "rlnNrOfFrames");
1011  MDL::addLabel(RLN_PARTICLE_NR_FRAMES_AVG, LABEL_INT, "rlnAverageNrOfFrames");
1012  MDL::addLabel(RLN_PARTICLE_ORI_NAME, LABEL_STRING, "rlnOriginalParticleName", TAGLABEL_IMAGE);
1013  MDL::addLabel(RLN_PARTICLE_PMAX, LABEL_DOUBLE, "rlnMaxValueProbDistribution");
1014  MDL::addLabel(RLN_PARTICLE_RANDOM_SUBSET, LABEL_INT, "rlnRandomSubset");
1015 
1016  MDL::addLabel(RLN_PIPELINE_EDGE_FROM, LABEL_STRING , "rlnPipeLineEdgeFromNode");
1017  MDL::addLabel(RLN_PIPELINE_EDGE_TO, LABEL_STRING ,"rlnPipeLineEdgeToNode");
1018  MDL::addLabel(RLN_PIPELINE_EDGE_PROCESS, LABEL_STRING ,"rlnPipeLineEdgeProcess");
1019  MDL::addLabel(RLN_PIPELINE_JOB_COUNTER, LABEL_INT, "rlnPipeLineJobCounter");
1020  MDL::addLabel(RLN_PIPELINE_NODE_NAME, LABEL_STRING , "rlnPipeLineNodeName");
1021  MDL::addLabel(RLN_PIPELINE_NODE_TYPE, LABEL_INT, "rlnPipeLineNodeType");
1022  MDL::addLabel(RLN_PIPELINE_PROCESS_ALIAS, LABEL_STRING , "rlnPipeLineProcessAlias");
1023  MDL::addLabel(RLN_PIPELINE_PROCESS_NAME, LABEL_STRING , "rlnPipeLineProcessName");
1024  MDL::addLabel(RLN_PIPELINE_PROCESS_TYPE, LABEL_INT, "rlnPipeLineProcessType");
1025  MDL::addLabel(RLN_PIPELINE_PROCESS_STATUS, LABEL_INT, "rlnPipeLineProcessStatus");
1026 
1027  MDL::addLabel(RLN_POSTPROCESS_AMPLCORR_MASKED, LABEL_DOUBLE, "rlnAmplitudeCorrelationMaskedMaps");
1028  MDL::addLabel(RLN_POSTPROCESS_AMPLCORR_UNMASKED, LABEL_DOUBLE, "rlnAmplitudeCorrelationUnmaskedMaps");
1029  MDL::addLabel(RLN_POSTPROCESS_BFACTOR, LABEL_DOUBLE, "rlnBfactorUsedForSharpening");
1030  MDL::addLabel(RLN_POSTPROCESS_DPR_MASKED, LABEL_DOUBLE, "rlnDifferentialPhaseResidualMaskedMaps");
1031  MDL::addLabel(RLN_POSTPROCESS_DPR_UNMASKED, LABEL_DOUBLE, "rlnDifferentialPhaseResidualUnmaskedMaps");
1032  MDL::addLabel(RLN_POSTPROCESS_FINAL_RESOLUTION, LABEL_DOUBLE, "rlnFinalResolution");
1033  MDL::addLabel(RLN_POSTPROCESS_FSC_GENERAL, LABEL_DOUBLE, "rlnFourierShellCorrelation");
1034  MDL::addLabel(RLN_POSTPROCESS_FSC_TRUE, LABEL_DOUBLE, "rlnFourierShellCorrelationCorrected");
1035  MDL::addLabel(RLN_POSTPROCESS_FSC_MASKED, LABEL_DOUBLE, "rlnFourierShellCorrelationMaskedMaps");
1036  MDL::addLabel(RLN_POSTPROCESS_FSC_UNMASKED, LABEL_DOUBLE, "rlnFourierShellCorrelationUnmaskedMaps");
1037  MDL::addLabel(RLN_POSTPROCESS_FSC_RANDOM_MASKED, LABEL_DOUBLE, "rlnCorrectedFourierShellCorrelationPhaseRandomizedMaskedMaps");
1038  MDL::addLabel(RLN_POSTPROCESS_GUINIER_FIT_INTERCEPT, LABEL_DOUBLE, "rlnFittedInterceptGuinierPlot");
1039  MDL::addLabel(RLN_POSTPROCESS_GUINIER_FIT_SLOPE, LABEL_DOUBLE, "rlnFittedSlopeGuinierPlot");
1040  MDL::addLabel(RLN_POSTPROCESS_GUINIER_FIT_CORRELATION, LABEL_DOUBLE, "rlnCorrelationFitGuinierPlot");
1041  MDL::addLabel(RLN_POSTPROCESS_GUINIER_VALUE_IN, LABEL_DOUBLE, "rlnLogAmplitudesOriginal");
1042  MDL::addLabel(RLN_POSTPROCESS_GUINIER_VALUE_INVMTF, LABEL_DOUBLE, "rlnLogAmplitudesMTFCorrected");
1043  MDL::addLabel(RLN_POSTPROCESS_GUINIER_VALUE_WEIGHTED, LABEL_DOUBLE, "rlnLogAmplitudesWeighted");
1044  MDL::addLabel(RLN_POSTPROCESS_GUINIER_VALUE_SHARPENED, LABEL_DOUBLE, "rlnLogAmplitudesSharpened");
1045  MDL::addLabel(RLN_POSTPROCESS_GUINIER_VALUE_INTERCEPT, LABEL_DOUBLE, "rlnLogAmplitudesIntercept");
1046  MDL::addLabel(RLN_POSTPROCESS_GUINIER_RESOL_SQUARED, LABEL_DOUBLE, "rlnResolutionSquared");
1047  MDL::addLabel(RLN_POSTPROCESS_MTF_VALUE, LABEL_DOUBLE, "rlnMtfValue");
1048 
1049  MDL::addLabel(RLN_SAMPLING_IS_3D, LABEL_BOOL, "rlnIs3DSampling");
1050  MDL::addLabel(RLN_SAMPLING_IS_3D_TRANS, LABEL_BOOL, "rlnIs3DTranslationalSampling");
1051  MDL::addLabel(RLN_SAMPLING_HEALPIX_ORDER, LABEL_INT, "rlnHealpixOrder");
1052  MDL::addLabel(RLN_SAMPLING_HELICAL_OFFSET_STEP, LABEL_DOUBLE, "rlnHelicalOffsetStep");
1053  MDL::addLabel(RLN_SAMPLING_LIMIT_TILT, LABEL_DOUBLE, "rlnTiltAngleLimit");
1054  MDL::addLabel(RLN_SAMPLING_OFFSET_RANGE, LABEL_DOUBLE, "rlnOffsetRange");
1055  MDL::addLabel(RLN_SAMPLING_OFFSET_STEP, LABEL_DOUBLE, "rlnOffsetStep");
1056  MDL::addLabel(RLN_SAMPLING_PERTURB, LABEL_DOUBLE, "rlnSamplingPerturbInstance");
1057  MDL::addLabel(RLN_SAMPLING_PERTURBATION_FACTOR, LABEL_DOUBLE, "rlnSamplingPerturbFactor");
1058  MDL::addLabel(RLN_SAMPLING_PSI_STEP, LABEL_DOUBLE, "rlnPsiStep");
1059  MDL::addLabel(RLN_SAMPLING_SYMMETRY, LABEL_STRING, "rlnSymmetryGroup");
1060 
1061  MDL::addLabel(RLN_SELECTED, LABEL_BOOL, "rlnSelected");
1062  MDL::addLabel(RLN_SELECT_PARTICLES_ZSCORE, LABEL_DOUBLE, "rlnParticleSelectZScore");
1063  MDL::addLabel(RLN_SORTED_IDX, LABEL_SIZET, "rlnSortedIndex");
1064  MDL::addLabel(RLN_STARFILE_MOVIE_PARTICLES, LABEL_STRING, "rlnStarFileMovieParticles");
1065  MDL::addLabel(RLN_PERFRAME_CUMULATIVE_WEIGHT, LABEL_DOUBLE, "rlnPerFrameCumulativeWeight");
1066  MDL::addLabel(RLN_PERFRAME_RELATIVE_WEIGHT, LABEL_DOUBLE, "rlnPerFrameRelativeWeight");
1067  MDL::addLabel(RLN_RESOLUTION, LABEL_DOUBLE, "rlnResolution");
1068  MDL::addLabel(RLN_RESOLUTION_ANGSTROM, LABEL_DOUBLE, "rlnAngstromResolution");
1069  MDL::addLabel(RLN_RESOLUTION_INVPIXEL, LABEL_DOUBLE, "rlnResolutionInversePixel");
1070  MDL::addLabel(RLN_SPECTRAL_IDX, LABEL_INT, "rlnSpectralIndex");
1071 
1072  MDL::addLabelAlias(RLN_CTF_BFACTOR, "rlnCtfBfactor"); //Relion-2.0
1073 
1075  MDL::addLabel(BUFFER_01, LABEL_STRING, "buffer_01");
1076  MDL::addLabel(BUFFER_02, LABEL_STRING, "buffer_02");
1077  MDL::addLabel(BUFFER_03, LABEL_STRING, "buffer_03");
1078  MDL::addLabel(BUFFER_04, LABEL_STRING, "buffer_04");
1079  MDL::addLabel(BUFFER_05, LABEL_STRING, "buffer_05");
1080  MDL::addLabel(BUFFER_06, LABEL_STRING, "buffer_06");
1081  MDL::addLabel(BUFFER_07, LABEL_STRING, "buffer_07");
1082  MDL::addLabel(BUFFER_08, LABEL_STRING, "buffer_08");
1083  MDL::addLabel(BUFFER_09, LABEL_STRING, "buffer_09");
1084  MDL::addLabel(BUFFER_10, LABEL_STRING, "buffer_10");
1085  MDL::addLabel(BUFFER_11, LABEL_STRING, "buffer_11");
1086  MDL::addLabel(BUFFER_12, LABEL_STRING, "buffer_12");
1087  MDL::addLabel(BUFFER_13, LABEL_STRING, "buffer_13");
1088  MDL::addLabel(BUFFER_14, LABEL_STRING, "buffer_14");
1089  MDL::addLabel(BUFFER_15, LABEL_STRING, "buffer_15");
1090  MDL::addLabel(BUFFER_16, LABEL_STRING, "buffer_16");
1091  MDL::addLabel(BUFFER_17, LABEL_STRING, "buffer_17");
1092  MDL::addLabel(BUFFER_18, LABEL_STRING, "buffer_18");
1093  MDL::addLabel(BUFFER_19, LABEL_STRING, "buffer_19");
1094  MDL::addLabel(BUFFER_20, LABEL_STRING, "buffer_20");
1095  MDL::addLabel(BUFFER_21, LABEL_STRING, "buffer_21");
1096  MDL::addLabel(BUFFER_22, LABEL_STRING, "buffer_22");
1097  MDL::addLabel(BUFFER_23, LABEL_STRING, "buffer_23");
1098  MDL::addLabel(BUFFER_24, LABEL_STRING, "buffer_24");
1099  MDL::addLabel(BUFFER_25, LABEL_STRING, "buffer_25");
1100  MDL::addLabel(BUFFER_26, LABEL_STRING, "buffer_26");
1101  MDL::addLabel(BUFFER_27, LABEL_STRING, "buffer_27");
1102  MDL::addLabel(BUFFER_28, LABEL_STRING, "buffer_28");
1103  MDL::addLabel(BUFFER_29, LABEL_STRING, "buffer_29");
1104  MDL::addLabel(BUFFER_30, LABEL_STRING, "buffer_30");
1105  MDL::addLabel(BUFFER_31, LABEL_STRING, "buffer_31");
1106  MDL::addLabel(BUFFER_32, LABEL_STRING, "buffer_32");
1107  MDL::addLabel(BUFFER_33, LABEL_STRING, "buffer_33");
1108  MDL::addLabel(BUFFER_34, LABEL_STRING, "buffer_34");
1109  MDL::addLabel(BUFFER_35, LABEL_STRING, "buffer_35");
1110  MDL::addLabel(BUFFER_36, LABEL_STRING, "buffer_36");
1111  MDL::addLabel(BUFFER_37, LABEL_STRING, "buffer_37");
1112  MDL::addLabel(BUFFER_38, LABEL_STRING, "buffer_38");
1113  MDL::addLabel(BUFFER_39, LABEL_STRING, "buffer_39");
1114  MDL::addLabel(BUFFER_40, LABEL_STRING, "buffer_40");
1115  MDL::addLabel(BUFFER_41, LABEL_STRING, "buffer_41");
1116  MDL::addLabel(BUFFER_42, LABEL_STRING, "buffer_42");
1117  MDL::addLabel(BUFFER_43, LABEL_STRING, "buffer_43");
1118  MDL::addLabel(BUFFER_44, LABEL_STRING, "buffer_44");
1119  MDL::addLabel(BUFFER_45, LABEL_STRING, "buffer_45");
1120  MDL::addLabel(BUFFER_46, LABEL_STRING, "buffer_46");
1121  MDL::addLabel(BUFFER_47, LABEL_STRING, "buffer_47");
1122  MDL::addLabel(BUFFER_48, LABEL_STRING, "buffer_48");
1123  MDL::addLabel(BUFFER_49, LABEL_STRING, "buffer_49");
1124  MDL::addLabel(BUFFER_50, LABEL_STRING, "buffer_50");
1125  MDL::addLabel(BUFFER_51, LABEL_STRING, "buffer_51");
1126  MDL::addLabel(BUFFER_52, LABEL_STRING, "buffer_52");
1127  MDL::addLabel(BUFFER_53, LABEL_STRING, "buffer_53");
1128  MDL::addLabel(BUFFER_54, LABEL_STRING, "buffer_54");
1129  MDL::addLabel(BUFFER_55, LABEL_STRING, "buffer_55");
1130  MDL::addLabel(BUFFER_56, LABEL_STRING, "buffer_56");
1131  MDL::addLabel(BUFFER_57, LABEL_STRING, "buffer_57");
1132  MDL::addLabel(BUFFER_58, LABEL_STRING, "buffer_58");
1133  MDL::addLabel(BUFFER_59, LABEL_STRING, "buffer_59");
1134  MDL::addLabel(BUFFER_60, LABEL_STRING, "buffer_60");
1135  MDL::addLabel(BUFFER_61, LABEL_STRING, "buffer_61");
1136  MDL::addLabel(BUFFER_62, LABEL_STRING, "buffer_62");
1137  MDL::addLabel(BUFFER_63, LABEL_STRING, "buffer_63");
1138  MDL::addLabel(BUFFER_64, LABEL_STRING, "buffer_64");
1139  MDL::addLabel(BUFFER_65, LABEL_STRING, "buffer_65");
1140  MDL::addLabel(BUFFER_66, LABEL_STRING, "buffer_66");
1141  MDL::addLabel(BUFFER_67, LABEL_STRING, "buffer_67");
1142  MDL::addLabel(BUFFER_68, LABEL_STRING, "buffer_68");
1143  MDL::addLabel(BUFFER_69, LABEL_STRING, "buffer_69");
1144  MDL::addLabel(BUFFER_70, LABEL_STRING, "buffer_70");
1145  MDL::addLabel(BUFFER_71, LABEL_STRING, "buffer_71");
1146  MDL::addLabel(BUFFER_72, LABEL_STRING, "buffer_72");
1147  MDL::addLabel(BUFFER_73, LABEL_STRING, "buffer_73");
1148  MDL::addLabel(BUFFER_74, LABEL_STRING, "buffer_74");
1149  MDL::addLabel(BUFFER_75, LABEL_STRING, "buffer_75");
1150  MDL::addLabel(BUFFER_76, LABEL_STRING, "buffer_76");
1151  MDL::addLabel(BUFFER_77, LABEL_STRING, "buffer_77");
1152  MDL::addLabel(BUFFER_78, LABEL_STRING, "buffer_78");
1153  MDL::addLabel(BUFFER_79, LABEL_STRING, "buffer_79");
1154  MDL::addLabel(BUFFER_80, LABEL_STRING, "buffer_80");
1155  MDL::addLabel(BUFFER_81, LABEL_STRING, "buffer_81");
1156  MDL::addLabel(BUFFER_82, LABEL_STRING, "buffer_82");
1157  MDL::addLabel(BUFFER_83, LABEL_STRING, "buffer_83");
1158  MDL::addLabel(BUFFER_84, LABEL_STRING, "buffer_84");
1159  MDL::addLabel(BUFFER_85, LABEL_STRING, "buffer_85");
1160  MDL::addLabel(BUFFER_86, LABEL_STRING, "buffer_86");
1161  MDL::addLabel(BUFFER_87, LABEL_STRING, "buffer_87");
1162  MDL::addLabel(BUFFER_88, LABEL_STRING, "buffer_88");
1163  MDL::addLabel(BUFFER_89, LABEL_STRING, "buffer_89");
1164  MDL::addLabel(BUFFER_90, LABEL_STRING, "buffer_90");
1165  MDL::addLabel(BUFFER_91, LABEL_STRING, "buffer_91");
1166  MDL::addLabel(BUFFER_92, LABEL_STRING, "buffer_92");
1167  MDL::addLabel(BUFFER_93, LABEL_STRING, "buffer_93");
1168  MDL::addLabel(BUFFER_94, LABEL_STRING, "buffer_94");
1169  MDL::addLabel(BUFFER_95, LABEL_STRING, "buffer_95");
1170  MDL::addLabel(BUFFER_96, LABEL_STRING, "buffer_96");
1171  MDL::addLabel(BUFFER_97, LABEL_STRING, "buffer_97");
1172  MDL::addLabel(BUFFER_98, LABEL_STRING, "buffer_98");
1173  MDL::addLabel(BUFFER_99, LABEL_STRING, "buffer_99");
1174 
1175  // Add user-defined label aliases for allow use Xmipp-MetaData
1176  // with other labels
1177  MDL::addExtraAliases();
1178  MDL::bufferIndex = BUFFER_01;
1179  }
1180 
1181  ~MDLabelStaticInit()
1182  {
1183  //Free memory allocated for labels data
1184  for (int i = MDL_FIRST_LABEL; i < MDL_LAST_LABEL; ++i)
1185  delete MDL::data[i];
1186  }
1187  friend class MDL;
1188 };
1191 #endif
RLN_OPTIMISER_ADAPTIVE_FRACTION
Definition: metadata_label.h:658
RLN_OPTIMISER_MODEL_STARFILE2
Definition: metadata_label.h:712
MDL_OBJID
object id (int), NOTE: This label is special and shouldn&#39;t be used
Definition: metadata_label.h:48
BUFFER_07
Definition: metadata_label.h:845
MDL_RESOLUTION_LOG_STRUCTURE_FACTOR
Logarithm of the structure factor.
Definition: metadata_label.h:393
MDL_CONTINUOUS_SCALE_Y
scale y of continuous assignment
Definition: metadata_label.h:120
MDL_CTF_BG_GAUSSIAN2_SIGMAU
CTF Background parameter.
Definition: metadata_label.h:179
RLN_CTF_SCALEFACTOR
linear scale-factor
Definition: metadata_label.h:524
MDL_ZSIZE
Z size (int)
Definition: metadata_label.h:516
TAGLABEL_PSD
Definition: metadata_label.h:972
RLN_IMAGE_BEAMTILT_X
Definition: metadata_label.h:554
RLN_SAMPLING_IS_3D_TRANS
Definition: metadata_label.h:810
MDL_CTF_K
CTF gain.
Definition: metadata_label.h:163
RLN_IMAGE_STATS_STDDEV
Definition: metadata_label.h:575
BUFFER_18
Definition: metadata_label.h:856
BUFFER_80
Definition: metadata_label.h:918
MDL_LL
contribution of an image to log-likelihood value
Definition: metadata_label.h:269
MDL_ASSIGNED_DIR_REF_CC
correlation of references assigned by two methods
Definition: metadata_label.h:380
MDL_SCORE_BY_LBP
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:420
BUFFER_60
Definition: metadata_label.h:898
MDL_SCORE_BY_ZERNIKE
< Micrographs Gini Coeff. (double)
Definition: metadata_label.h:427
RLN_OPTIMISER_DO_SGD
Definition: metadata_label.h:679
RLN_MICROGRAPH_MOVIE_NAME
Definition: metadata_label.h:593
MDL_DM3_VALUE
Definition: metadata_label.h:226
MDL_CONTINUOUS_X
X shift of continuous assignment.
Definition: metadata_label.h:113
RLN_SAMPLING_LIMIT_TILT
Definition: metadata_label.h:813
MDL_REFMD
Name of Metadata file for all references(string)
Definition: metadata_label.h:379
BUFFER_05
Definition: metadata_label.h:843
BUFFER_51
Definition: metadata_label.h:889
MDL_CTF_XF
The CTF is valid within (x0,y0) to (xF,yF) in the micrograph coordinates.
Definition: metadata_label.h:143
MDL_MICROGRAPH_ORIGINAL
Name of the original micrograph, MDL_MICROGRAPH is probably a downsampled version of this one (std::s...
Definition: metadata_label.h:289
MDL_NEIGHBOR
Particular neighbor (pointed myNEIGHBORS)
Definition: metadata_label.h:308
RLN_MLMODEL_DIFF2_HALVES_REF
Definition: metadata_label.h:608
MDL_STDDEV
tsne coefficients in 2D
Definition: metadata_label.h:452
MDL::isMicrograph
static bool isMicrograph(const MDLabel label)
Definition: metadata_static.cpp:295
MDL_ANGLE_ROT
Rotation angle of an image (double,degrees)
Definition: metadata_label.h:55
MDL_VOLUME_SCORE3
< Score 2 for volumes
Definition: metadata_label.h:478
MDL_SCORE_BY_ALIGNABILITY_ACCURACY
score by alignability (double)
Definition: metadata_label.h:410
RLN_IMAGE_SIZE
Definition: metadata_label.h:568
MDL_CTF_XRAY_OUTER_ZONE_WIDTH
Algorithm used to generate Xray PSF.
Definition: metadata_label.h:208
BUFFER_29
Definition: metadata_label.h:867
MDL_BLOCK_NUMBER
Current block number (for incremental EM)
Definition: metadata_label.h:77
MDL_WEIGHT_ALIGNABILITY
Weight due to Alignability Precision and Accuracy.
Definition: metadata_label.h:491
MDL_PRJ_PSI_NOISE
Definition: metadata_label.h:357
MDL_CTF_DEFOCUSU
Defocus U (Angstroms)
Definition: metadata_label.h:135
MDL_MICROGRAPH_TILTED_ORIGINAL
Name of the corresponding original, tilted micrograph (std::string)
Definition: metadata_label.h:291
MDL_SCORE_BY_PCA_RESIDUAL_EXP
Definition: metadata_label.h:406
MDL_CORRELATION_WEIGHT
weighted correlation value between a particle and its assigned projection taking into the difference ...
Definition: metadata_label.h:124
MDL_AVG_CHANGES_ORIENTATIONS
Definition: metadata_label.h:71
RLN_OPTIMISER_USE_TOO_COARSE_SAMPLING
Definition: metadata_label.h:737
MDL_ANGLE_TILT2
Tilting angle of an image (double,degrees)
Definition: metadata_label.h:60
MDL_SHIFT_X3
Shift for the image in the X axis (double)
Definition: metadata_label.h:433
RLN_PARTICLE_CLASS
Definition: metadata_label.h:757
BUFFER_64
Definition: metadata_label.h:902
BUFFER_35
Definition: metadata_label.h:873
RLN_OPTIMISER_ITERATION_NO
Definition: metadata_label.h:704
MDL_RESOLUTION_SSNR
Fourier shell correlation (double)
Definition: metadata_label.h:394
RLN_IMAGE_SAMPLINGRATE_X
Definition: metadata_label.h:565
MDL_CONTINUOUS_SCALE_ANGLE
scale angle of continuous assignment
Definition: metadata_label.h:118
MDL_ORDER
Definition: metadata_label.h:323
RLN_POSTPROCESS_GUINIER_RESOL_SQUARED
Definition: metadata_label.h:806
BUFFER_14
Definition: metadata_label.h:852
MDL_RESOLUTION_FSO
Fourier shell occupancy (double)
Definition: metadata_label.h:391
MDL_SHIFT_DIFF0
shift difference (double)
Definition: metadata_label.h:442
MDL_SAMPLINGRATE_Y
sampling rate in A/pixel (double)
Definition: metadata_label.h:401
MDL_CTF_SAMPLING_RATE
Sampling rate.
Definition: metadata_label.h:131
RLN_MLMODEL_HELICAL_RISE_INITIAL_STEP
Definition: metadata_label.h:625
RLN_OPTIMISER_SGD_SUBSET_START
Definition: metadata_label.h:726
MDL_RESOLUTION_LOCAL_RESIDUE
Frequency in A of the local resolution of a residue (double)
Definition: metadata_label.h:392
MDL::str2Label
static MDLabel str2Label(const String &labelName)
Definition: metadata_static.cpp:132
MDL_MACRO_CMD
Definition: metadata_label.h:342
MDL_SHIFT_Y2
Shift for the image in the Y axis (double)
Definition: metadata_label.h:436
MDL_CTF_BG_GAUSSIAN_ANGLE
CTF Background parameter.
Definition: metadata_label.h:172
RLN_SAMPLING_HELICAL_OFFSET_STEP
Definition: metadata_label.h:812
RLN_MLMODEL_POWER_REF
Definition: metadata_label.h:642
RLN_CTF_Q0
Amplitude contrast.
Definition: metadata_label.h:542
MDL_MAGNIFICATION
Definition: metadata_label.h:277
metadata_label.h
MDL::isImage
static bool isImage(const MDLabel label)
Definition: metadata_static.cpp:285
BUFFER_59
Definition: metadata_label.h:897
BUFFER_44
Definition: metadata_label.h:882
MDL_SYMNO
Symmetry number for a projection (used in ART)
Definition: metadata_label.h:459
RLN_CTF_DEFOCUSV
Defocus V (Angstroms)
Definition: metadata_label.h:528
MDL_SAMPLINGRATE_X
sampling rate in A/pixel (double)
Definition: metadata_label.h:400
MDL_CRYSTAL_CELLY
Cell location for crystals.
Definition: metadata_label.h:101
MDL_WEIGHT_PRECISION_ALIGNABILITY
Weight due to Alignability Precision.
Definition: metadata_label.h:490
RLN_OPTIMISER_MAX_NR_POOL
Definition: metadata_label.h:710
RLN_OPTIMISER_DO_CORRECT_CTF
Definition: metadata_label.h:672
MDL_SCORE_BY_ENTROPY
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:417
MDL_CTF_CRIT_PSDVARIANCE
PSD variance.
Definition: metadata_label.h:199
metadata_row_vec.h
MDL_VOLUME_SCORE_SUM
Definition: metadata_label.h:472
MDL::getLabelDict
static std::map< String, MDLabel > & getLabelDict()
Definition: metadata_static.cpp:260
MDLabelType
MDLabelType
Definition: metadata_label.h:948
MDL_SAMPLINGRATE_Z
sampling rate in A/pixel (double)
Definition: metadata_label.h:402
MDL_WEIGHT_JUMPER
Weight due to angular jumping.
Definition: metadata_label.h:484
MDL_MICROGRAPH_PARTICLES
Name of a position file (std::string)
Definition: metadata_label.h:288
MDL_RESIDUE
Definition: metadata_label.h:382
BUFFER_62
Definition: metadata_label.h:900
MDL_IMAGE3
Image associated to this object (std::string)
Definition: metadata_label.h:257
RLN_MATRIX_3_3
Definition: metadata_label.h:590
LABEL_INT
Definition: metadata_label.h:951
RLN_OPTIMISER_RANDOM_SEED
Definition: metadata_label.h:720
BUFFER_95
Definition: metadata_label.h:933
MDL_PHANTOM_SCALE
Number which will multiply all features (double)
Definition: metadata_label.h:340
MDL_SCORE_BY_ALIGNABILITY_PRECISION_EXP
score by alignability experimental particles (double)
Definition: metadata_label.h:411
MDL::isInt
static bool isInt(const MDLabel label)
Definition: metadata_static.cpp:203
RLN_OPTIMISER_SGD_SIGMA2FUDGE_INI
Definition: metadata_label.h:724
MDL_CTF_DEFOCUS_ANGLE
Defocus angle (degrees)
Definition: metadata_label.h:151
MDL_KERDENSOM_FUNCTIONAL
Functional value (double)
Definition: metadata_label.h:263
RLN_CTF_VOLTAGE
Microscope voltage (kV)
Definition: metadata_label.h:526
RLN_CTF_LONGITUDINAL_DISPLACEMENT
Longitudinal displacement.
Definition: metadata_label.h:540
RLN_OPTIMISER_HELICAL_SIGMA_DISTANCE
Definition: metadata_label.h:697
BUFFER_54
Definition: metadata_label.h:892
MDL_ANGLE_ROT_DIFF
difference between rot angles (double,degrees)
Definition: metadata_label.h:58
MDL_SCORE_BY_HISTDIST
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:419
BUFFER_04
Definition: metadata_label.h:842
RLN_OPTIMISER_HIGHRES_LIMIT_EXP
Definition: metadata_label.h:701
RLN_OPTIMISER_MAGNIFICATION_RANGE
Definition: metadata_label.h:707
RLN_MATRIX_2_2
Definition: metadata_label.h:586
RLN_PARTICLE_HELICAL_TUBE_PITCH
Definition: metadata_label.h:773
MDL_MISSINGREGION_THX0
Initial tilt angle in X for missing region in subtomogram.
Definition: metadata_label.h:298
BUFFER_79
Definition: metadata_label.h:917
MDL_IMAGE_IDX
Index of an image within a list (size_t)
Definition: metadata_label.h:248
MDL_MACRO_CMD_ARGS
Definition: metadata_label.h:343
MDL_CORR_DENOISED_PROJECTION
Correlation between the denoised image and the projection proposed.
Definition: metadata_label.h:94
MDL_SUM
Sum of elements of a given type (double) [this is a genereic type do not use to transfer information ...
Definition: metadata_label.h:457
RLN_OPTIMISER_HELICAL_SYMMETRY_LOCAL_REFINEMENT
Definition: metadata_label.h:696
MDL_GATHER_ID
Definition: metadata_label.h:49
MDL_PRJ_TILT_RANGE
< Type of randomness for Tilt (std::string)
Definition: metadata_label.h:365
MDL_SCORE_BY_ALIGNABILITY_PRECISION_REF
score by alignability references (double)
Definition: metadata_label.h:412
RLN_SPECTRAL_IDX
Definition: metadata_label.h:835
MDL_CTF_INPUTPARAMS
Parameters file for the CTF Model (std::string)
Definition: metadata_label.h:128
RLN_OPTIMISER_HELICAL_TUBE_OUTER_DIAMETER
Definition: metadata_label.h:695
RLN_MLMODEL_GROUP_NAME
Definition: metadata_label.h:613
MDL_CONTINUOUS_FLIP
Flip of continuous assignment.
Definition: metadata_label.h:115
RLN_CTF_VALIDATIONSCORE
Gctf-based validation score for CTF fit.
Definition: metadata_label.h:545
RLN_IMAGE_STATS_AVG
Definition: metadata_label.h:574
MDL_CTF_BG_GAUSSIAN_K
CTF Background parameter.
Definition: metadata_label.h:167
RLN_IMAGE_COORD_Y
Definition: metadata_label.h:558
MDL_CTF_DEFOCUS_PLANEVA
Defocus = A*x+B*y+C.
Definition: metadata_label.h:148
MDL_CTF_DEFOCUS_PLANEVB
Defocus = A*x+B*y+C.
Definition: metadata_label.h:149
MDL_TOMOGRAM_VOLUME
Name for the reconstructed tomogram volume (std::string)
Definition: metadata_label.h:460
RLN_OPTIMISER_MODEL_STARFILE
Definition: metadata_label.h:711
MDL_COST_PERCENTILE
Cost percentile for the image (double)
Definition: metadata_label.h:91
BUFFER_99
Definition: metadata_label.h:937
MDL_RESOLUTION_RFACTOR
Definition: metadata_label.h:396
MDL_Z
Z component (double)
Definition: metadata_label.h:503
MDL_DIMENSIONS_2D
Definition: metadata_label.h:372
MDL_GRAPH_DISTANCE2MAX
Distance to graph filtered max.
Definition: metadata_label.h:239
MDL_LOCAL_ALIGNMENT_COEFFS_Y
BSpline coefficient in Y dim.
Definition: metadata_label.h:272
BUFFER_52
Definition: metadata_label.h:890
MDL_PRJ_ROT_RANDSTR
< Rotational angle dev and mean noise (vector double)
Definition: metadata_label.h:361
MDL_CTF_CRIT_NONASTIGMATICVALIDITY
Maximum frequency (in Angstroms) at which non-astigmatic CTF correction is valid. ...
Definition: metadata_label.h:187
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_CLASSES
Definition: metadata_label.h:731
MDL_SIGNALCHANGE
Signal change for an image.
Definition: metadata_label.h:447
MDL_MAX
Maximum value (double)
Definition: metadata_label.h:282
RLN_MICROGRAPH_TILT_ANGLE
Definition: metadata_label.h:596
RLN_MLMODEL_LL
Definition: metadata_label.h:628
MDL_RESOLUTION_ANISOTROPY
Resolution anisotropy used to store the significance of the Bingham Test (double) ...
Definition: metadata_label.h:383
RLN_IMAGE_COORD_Z
Definition: metadata_label.h:559
MDL::isCtfParam
static bool isCtfParam(const MDLabel label)
Definition: metadata_static.cpp:280
MDL_ANGLE_TILT
Tilting angle of an image (double,degrees)
Definition: metadata_label.h:59
MDL_PICKING_PARTICLE_SIZE
Particle size for particle picking.
Definition: metadata_label.h:349
RLN_OPTIMISER_DATA_ARE_CTF_PHASE_FLIPPED
Definition: metadata_label.h:667
RLN_POSTPROCESS_GUINIER_FIT_SLOPE
Definition: metadata_label.h:800
RLN_MLMODEL_HELICAL_NR_ASU
Definition: metadata_label.h:617
RLN_IMAGE_FRAME_NR
Definition: metadata_label.h:560
MDL_WEIGHT_REALCORR
Weight due correlation between two images/subtomos.
Definition: metadata_label.h:486
MDL_PICKING_AUTOPARTICLES_SIZE
Number of automatic particles picked.
Definition: metadata_label.h:350
RLN_MLMODEL_HELICAL_TWIST_MIN
Definition: metadata_label.h:619
RLN_OPTIMISER_RADIUS_MASK_3D_MAP
Definition: metadata_label.h:718
MDL_ANGLE_DIFF0
difference between two angles (double,degrees)
Definition: metadata_label.h:63
BUFFER_40
Definition: metadata_label.h:878
RLN_PARTICLE_HELICAL_TRACK_LENGTH
Definition: metadata_label.h:774
MDL_MISSINGREGION_THY0
Initial tilt angle in Y for missing region in subtomogram.
Definition: metadata_label.h:296
MDL::isValidLabel
static bool isValidLabel(const MDLabel &label)
Definition: metadata_static.cpp:238
BUFFER_38
Definition: metadata_label.h:876
RLN_ORIENT_TILT_PRIOR
Definition: metadata_label.h:751
MDL::MDLabelStaticInit
friend class MDLabelStaticInit
Definition: metadata_static.h:126
RLN_IMAGE_MAGNIFICATION_CORRECTION
Definition: metadata_label.h:561
MDL_SHIFT_X
Shift for the image in the X axis (double)
Definition: metadata_label.h:431
RLN_IMAGE_RECONSTRUCT_NAME
Definition: metadata_label.h:549
RLN_OPTIMISER_SGD_SUBSET_SIZE
Definition: metadata_label.h:727
MDL_SCORE_BY_ALIGNABILITY_PRECISION
score by alignability (double)
Definition: metadata_label.h:409
MDL_CTF_CRIT_FIRSTZEROAVG
First zero average (in Angstroms)
Definition: metadata_label.h:192
RLN_OPTIMISER_SAMPLING_STARFILE
Definition: metadata_label.h:722
RLN_SAMPLING_OFFSET_STEP
Definition: metadata_label.h:815
MDL::emptifyHeader
static void emptifyHeader(MDRow &)
Definition: metadata_static.cpp:321
RLN_OPTIMISER_HAS_LARGE_INCR_SIZE_ITER_AGO
Definition: metadata_label.h:690
MDL_TSID
Tilt series id (std::string)
Definition: metadata_label.h:463
MDL_CTF_CORRECTED
Definition: metadata_label.h:127
RLN_PIPELINE_NODE_NAME
Definition: metadata_label.h:777
RLN_PARTICLE_ID
Definition: metadata_label.h:759
MDL_CTF_CONVERGENCE_CONE
Convergence cone.
Definition: metadata_label.h:159
RLN_IMAGE_STATS_MIN
Definition: metadata_label.h:572
TAGLABEL_TEXTFILE
Definition: metadata_label.h:965
MDL::isBool
static bool isBool(const MDLabel label)
Definition: metadata_static.cpp:213
RLN_POSTPROCESS_AMPLCORR_UNMASKED
Definition: metadata_label.h:788
MDL::labelType2Str
static String labelType2Str(MDLabelType type)
Definition: metadata_static.cpp:179
RLN_SAMPLING_PSI_STEP
Definition: metadata_label.h:819
RLN_OPTIMISER_CHANGES_OPTIMAL_ORIENTS
Definition: metadata_label.h:664
MDL_ZSCORE_SHAPE1
Z Score (double)
Definition: metadata_label.h:512
BUFFER_37
Definition: metadata_label.h:875
RLN_SAMPLING_OFFSET_RANGE
Definition: metadata_label.h:814
MDL_PRJ_ANGFILE
File for generated angles.
Definition: metadata_label.h:356
MDL_ANGLE_TILT3
Tilting angle of an image (double,degrees)
Definition: metadata_label.h:61
MDL_GOOD_REGION_SCORE
Z Score (double)
Definition: metadata_label.h:507
MDL_CLASS_PERCENTAGE
Percentage of images assigned to the same class as this image.
Definition: metadata_label.h:82
MDL_CTF_BG_GAUSSIAN2_SIGMAV
CTF Background parameter.
Definition: metadata_label.h:180
MDL_AVG_CHANGES_CLASSES
Average change in offset (double pixels)
Definition: metadata_label.h:73
RLN_OPTIMISER_DO_SPLIT_RANDOM_HALVES
Definition: metadata_label.h:683
MDL_CTF_CRIT_PSDCORRELATION90
PSD correlation at 90 degrees.
Definition: metadata_label.h:188
MDL_ANGLE_PSI
Special label to be used when gathering MDs in MpiMetadataPrograms.
Definition: metadata_label.h:51
MDL_SCORE_BY_GRANULO
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:418
RLN_MLMODEL_SIGMA_OFFSET
Definition: metadata_label.h:645
MDL_DM3_NODEID
Definition: metadata_label.h:220
MDL_LOCAL_ALIGNMENT_CONF_2_5_PERC
A shift amount at confidence level of 2.5%.
Definition: metadata_label.h:273
MDL_CTF_BG_SQRT_K
CTF Background parameter.
Definition: metadata_label.h:173
MDL_CTF_MODEL
Name for the CTF Model (std::string)
Definition: metadata_label.h:129
BUFFER_93
Definition: metadata_label.h:931
MDL_SHIFT_Y_DIFF
difference in Shift along Y axis (double)
Definition: metadata_label.h:438
MDL_SERIE
A collection of micrographs, e.g. a tilt serie (std::string)
Definition: metadata_label.h:430
RLN_IMAGE_ENABLED
Definition: metadata_label.h:551
MDL_NOISE_COORD
Definition: metadata_label.h:321
MDL_DATATYPE
if read from file original image datatype, this is an struct defined in image
Definition: metadata_label.h:213
MDL_NOISE_ANGLES
Noise description for projected angles.
Definition: metadata_label.h:319
RLN_MLMODEL_HELICAL_RISE
Definition: metadata_label.h:622
RLN_MLMODEL_MINIMUM_RADIUS_NN_INTERPOLATION
Definition: metadata_label.h:629
RLN_OPTIMISER_TAU_SPECTRUM_NAME
Definition: metadata_label.h:736
RLN_CTF_DEFOCUSU
Defocus U (Angstroms)
Definition: metadata_label.h:527
MDL_ZSCORE_SHAPE2
Z Score (double)
Definition: metadata_label.h:513
MDL_WROBUST
Weight of t-student distribution in robust Maximum likelihood.
Definition: metadata_label.h:494
RLN_CTF_CA
Chromatic aberration.
Definition: metadata_label.h:531
RLN_CTF_LENS_STABILITY
Lens stability.
Definition: metadata_label.h:536
BUFFER_83
Definition: metadata_label.h:921
MDL::isVector
static bool isVector(const MDLabel label)
Definition: metadata_static.cpp:228
MDL_ZSCORE_DEEPLEARNING1
Z Score (double)
Definition: metadata_label.h:506
MDL_CTF_DEFOCUS_PLANEVC
Defocus = A*x+B*y+C.
Definition: metadata_label.h:150
RLN_PIPELINE_PROCESS_STATUS
Definition: metadata_label.h:782
RLN_MLMODEL_DIMENSIONALITY_DATA
Definition: metadata_label.h:607
RLN_OPTIMISER_PARTICLE_DIAMETER
Definition: metadata_label.h:717
MDL_BGMEAN
<Bfactor of a map, or even a local bfactor
Definition: metadata_label.h:76
MDL_COORD_CONSENSUS_SCORE
Store a score for the coords. consensus (it will change the behavoir of the viewer) ...
Definition: metadata_label.h:89
MDL_CTF_DEFOCUS_PLANEUA
Defocus = A*x+B*y+C.
Definition: metadata_label.h:145
BUFFER_58
Definition: metadata_label.h:896
MDL_ORIGIN_X
auxiliary label to be used as an index (long)
Definition: metadata_label.h:324
BUFFER_08
Definition: metadata_label.h:846
LABEL_VECTOR_DOUBLE
Definition: metadata_label.h:955
MDL_CTF_BG_GAUSSIAN_CV
CTF Background parameter.
Definition: metadata_label.h:171
MDL_NMA_MAXRANGE
Maximum value observed for a given NMA mode.
Definition: metadata_label.h:315
MDL_ZSCORE_SNR1
Z Score (double)
Definition: metadata_label.h:514
RLN_OPTIMISER_HELICAL_RISE_INITIAL
Definition: metadata_label.h:692
MDL_CTF_YF
The CTF is valid within (x0,y0) to (xF,yF) in the micrograph coordinates.
Definition: metadata_label.h:144
RLN_MLMODEL_PRIOR_MODE
Definition: metadata_label.h:643
MDL_KERDENSOM_SIGMA
Sigma value (double)
Definition: metadata_label.h:265
RLN_MLMODEL_SIGMA_TILT
Definition: metadata_label.h:647
RLN_MLMODEL_TAU2_FUDGE_FACTOR
Definition: metadata_label.h:653
RLN_ORIENT_PSI_PRIOR
Definition: metadata_label.h:753
MDL_NMA_ATOMSHIFT
NMA Atom shift in Angstroms.
Definition: metadata_label.h:312
MDL_TEST_SIZE
Definition: metadata_label.h:465
MDL_CONTINUOUS_Y
Y shift of continuous assignment.
Definition: metadata_label.h:114
MDL_CTF_DEFOCUS_COEFS
Coefficients of the defocus adjustment plane.
Definition: metadata_label.h:139
RLN_MLMODEL_HELICAL_RISE_MIN
Definition: metadata_label.h:623
RLN_MLMODEL_IS_HELIX
Definition: metadata_label.h:626
MDL::label2StrSql
static String label2StrSql(const MDLabel label)
Definition: metadata_static.cpp:144
RLN_OPTIMISER_DO_SOLVENT_FLATTEN
Definition: metadata_label.h:680
RLN_PARTICLE_HELICAL_TUBE_ID
Definition: metadata_label.h:772
MDL_PSD
A Power Spectrum Density file name (std::string)
Definition: metadata_label.h:373
MDL_CTF_BG_GAUSSIAN2_K
CTF Background parameter.
Definition: metadata_label.h:178
LABEL_STRING
Definition: metadata_label.h:954
BUFFER_84
Definition: metadata_label.h:922
MDL_CTF_BG_GAUSSIAN2_CU
CTF Background parameter.
Definition: metadata_label.h:181
MDL_SCORE_BY_PCA_RESIDUAL_PROJ
Definition: metadata_label.h:405
MDL_WEIGHT_P
Weight assigned to the image accordint to its clusterability with a significance with respect noise (...
Definition: metadata_label.h:481
BUFFER_85
Definition: metadata_label.h:923
MDL_CTF_CS
Spherical aberration.
Definition: metadata_label.h:152
RLN_MLMODEL_HELICAL_TWIST_MAX
Definition: metadata_label.h:620
RLN_OPTIMISER_MAGNIFICATION_STEP
Definition: metadata_label.h:708
MDL_ZSCORE_SNR2
Z Score (double)
Definition: metadata_label.h:515
MDL_IMAGE_TILTED
Name of the tilted images associated to MDL_IMAGE.
Definition: metadata_label.h:252
MDL_CORRELATION_IDX
correlation value between a particle and its assigned projection
Definition: metadata_label.h:122
MDL_CTF_CRIT_FIRSTZERORATIO
First zero ratio.
Definition: metadata_label.h:189
RLN_MLMODEL_PADDING_FACTOR
Definition: metadata_label.h:636
RLN_ORIENT_ORIGIN_Y_PRIOR
Definition: metadata_label.h:745
RLN_CTF_VALUE
CTF value.
Definition: metadata_label.h:544
RLN_POSTPROCESS_DPR_UNMASKED
Definition: metadata_label.h:791
BUFFER_73
Definition: metadata_label.h:911
MDL_ANGLE_Y2
Angle between y-axis and tilt-axis (double, degrees) for tilted micrographs.
Definition: metadata_label.h:67
RLN_ORIENT_ORIGIN_Z
Definition: metadata_label.h:746
BUFFER_24
Definition: metadata_label.h:862
BUFFER_90
Definition: metadata_label.h:928
MDL_CTF_DIMENSIONS
Definition: metadata_label.h:205
RLN_SELECT_PARTICLES_ZSCORE
Definition: metadata_label.h:826
MDL_GRAPH_CC_PREVIOUS
when previous assignment validation
Definition: metadata_label.h:242
i
#define i
Definition: numerical_recipes.cpp:2493
MDL_CRYSTAL_LATTICE_B
< Lattice vector for projection (vector double)
Definition: metadata_label.h:103
MDL_ENABLED
Is this image enabled? (int [-1 or 1])
Definition: metadata_label.h:231
TAGLABEL_IMAGE
Definition: metadata_label.h:968
BUFFER_43
Definition: metadata_label.h:881
BUFFER_17
Definition: metadata_label.h:855
MDL_RESOLUTION_DPR
differential phase residual (double)
Definition: metadata_label.h:384
RLN_MLMODEL_PDF_CLASS
Definition: metadata_label.h:637
MDL_OPTICALFLOW_MEANY
Mean of the movement in y direction of the motion map> (double)
Definition: metadata_label.h:329
RLN_OPTIMISER_COARSE_SIZE
Definition: metadata_label.h:666
MDL_ITEM_ID
Unique identifier for items inside a list or set (std::size_t)
Definition: metadata_label.h:261
BUFFER_12
Definition: metadata_label.h:850
MDL_PHANTOM_FEATURE_DENSITY
The density of the feature (double)
Definition: metadata_label.h:336
MDL_CTF_VOLTAGE
Microscope voltage (kV)
Definition: metadata_label.h:133
RLN_PERFRAME_CUMULATIVE_WEIGHT
Definition: metadata_label.h:829
BUFFER_63
Definition: metadata_label.h:901
RLN_OPTIMISER_LOWRES_JOIN_RANDOM_HALVES
Definition: metadata_label.h:706
MDL_CTF_BG_GAUSSIAN2_ANGLE
CTF Background parameter.
Definition: metadata_label.h:183
RLN_ORIENT_ORIGIN_X
Definition: metadata_label.h:742
MDL_CTF_CRIT_FITTINGCORR13
Correlation between the 1st and 3rd ring of the CTF.
Definition: metadata_label.h:198
RLN_POSTPROCESS_GUINIER_VALUE_WEIGHTED
Definition: metadata_label.h:803
RLN_PARTICLE_NR_FRAMES_AVG
Definition: metadata_label.h:768
RLN_MLMODEL_HELICAL_TWIST_INITIAL_STEP
Definition: metadata_label.h:621
MDL_YSIZE
Y size (int)
Definition: metadata_label.h:502
RLN_CTF_BFACTOR
B-factor.
Definition: metadata_label.h:523
RLN_PIPELINE_NODE_TYPE
Definition: metadata_label.h:778
TAGLABEL_NOTAG
Definition: metadata_label.h:964
RLN_RESOLUTION_INVPIXEL
Definition: metadata_label.h:834
MDL_CTF_DEFOCUS_PLANEUC
Defocus = A*x+B*y+C.
Definition: metadata_label.h:147
MDL_CRYSTAL_SHIFTZ
Shift for the image in the Z axis (double) for crystals.
Definition: metadata_label.h:110
MDL_SHIFT_Y3
Shift for the image in the Y axis (double)
Definition: metadata_label.h:437
BUFFER_70
Definition: metadata_label.h:908
MDL_VOLUME_SCORE_MEAN
Score corresponding to the mean of cc with cc>threshold.
Definition: metadata_label.h:474
RLN_POSTPROCESS_GUINIER_VALUE_INTERCEPT
Definition: metadata_label.h:805
MDL_PRJ_VOL
Definition: metadata_label.h:366
MDL::labelType
static MDLabelType labelType(const MDLabel label)
Definition: metadata_static.cpp:250
RLN_MLMODEL_SIGMA_ROT
Definition: metadata_label.h:646
RLN_OPTIMISER_MAX_COARSE_SIZE
Definition: metadata_label.h:709
RLN_MLMODEL_INTERPOLATOR
Definition: metadata_label.h:627
RLN_POSTPROCESS_MTF_VALUE
Detector MTF value.
Definition: metadata_label.h:807
BUFFER_86
Definition: metadata_label.h:924
MDL_CLASS_INTERSECTION_SIZE_PVALUE
P-value (1-percentile) of the class size compared to a random distribution (double in [0...
Definition: metadata_label.h:97
MDL_LOCAL_ALIGNMENT_CONTROL_POINTS
Three values representing number of control points used for local alignment (X, Y, N)
Definition: metadata_label.h:275
MDL_IMAGE5
Image associated to this object (std::string)
Definition: metadata_label.h:259
MDL_REF2
Store a second class (int)
Definition: metadata_label.h:378
BUFFER_47
Definition: metadata_label.h:885
BUFFER_71
Definition: metadata_label.h:909
MDL_CTF_BG_R3
CTF Background polynomial parameter.
Definition: metadata_label.h:186
RLN_PIPELINE_EDGE_FROM
Definition: metadata_label.h:783
MDL_ANGLE_ROT2
Rotation angle of an image (double,degrees)
Definition: metadata_label.h:56
RLN_OPTIMISER_LOCAL_SYMMETRY_FILENAME
Definition: metadata_label.h:705
MDL_SPH_TSNE_COEFF2D
tsne coefficicient in 1D
Definition: metadata_label.h:451
MDL_CTF_SAMPLING_RATE_Z
Sampling rate in Z direction.
Definition: metadata_label.h:132
MDL_MIN
Minimum value (double)
Definition: metadata_label.h:292
MDL_CTF_VPP_RADIUS
Definition: metadata_label.h:211
MDL::resetBufferIndex
static void resetBufferIndex()
Definition: metadata_static.cpp:115
RLN_AREA_NAME
Name for the area (or field of view). If one does not use (tilt) series, area would be the same as mi...
Definition: metadata_label.h:520
MDL_CTF_ENV_R2
CTF Envelope polynomial parameter.
Definition: metadata_label.h:166
MDL_CRYSTAL_LATTICE_A
Definition: metadata_label.h:102
RLN_MLMODEL_SSNR_REF
Definition: metadata_label.h:652
RLN_MATRIX_2_3
Definition: metadata_label.h:587
RLN_OPTIMISER_NR_ITER_WO_RESOL_GAIN
Definition: metadata_label.h:714
RLN_PIPELINE_EDGE_PROCESS
Definition: metadata_label.h:785
MDL_SCORE_BY_ALIGNABILITY_ACCURACY_REF
score by alignability references (double)
Definition: metadata_label.h:414
RLN_MATRIX_1_1
Definition: metadata_label.h:582
MDL_CTF_CRIT_FITTINGSCORE
Score of the fitting.
Definition: metadata_label.h:197
MDL_CRYSTAL_SHIFTY
Shift for the image in the Y axis (double) for crystals.
Definition: metadata_label.h:109
MDL_WEIGHT_SIGNIFICANT
Weight due to Angular significance.
Definition: metadata_label.h:488
MDL_NMA_SCORE
NMA Score of a given mode.
Definition: metadata_label.h:317
BUFFER_21
Definition: metadata_label.h:859
RLN_OPTIMISER_DATA_STARFILE
Definition: metadata_label.h:669
MDL_SHIFT_DIFF2
shift difference (double)
Definition: metadata_label.h:444
RLN_OPTIMISER_DO_SKIP_ALIGN
Definition: metadata_label.h:681
BUFFER_55
Definition: metadata_label.h:893
RLN_ORIENT_PSI
Definition: metadata_label.h:752
LABEL_VECTOR_SIZET
Definition: metadata_label.h:957
BUFFER_67
Definition: metadata_label.h:905
MDL_IMAGE_ORIGINAL
Name of an image from which MDL_IMAGE is coming from.
Definition: metadata_label.h:249
RLN_POSTPROCESS_FINAL_RESOLUTION
Definition: metadata_label.h:792
RLN_MATRIX_1_3
Definition: metadata_label.h:584
BUFFER_72
Definition: metadata_label.h:910
MDL_COUNT
Number of elements of a type (int) [this is a genereic type do not use to transfer information to ano...
Definition: metadata_label.h:92
MDL_SHIFT_Z3
Shift for the image in the Z axis (double)
Definition: metadata_label.h:441
MDL_VOLUME_SCORE_MIN
Score corresponding to the min of cc with cc>threshold.
Definition: metadata_label.h:475
MDL_CRYSTAL_NOISE_SHIFT
noise if center of unit cell (vector double)
Definition: metadata_label.h:111
RLN_PARTICLE_PMAX
Definition: metadata_label.h:770
MDL_PICKING_MICROGRAPH_STATE
Micrograph state for particle picking.
Definition: metadata_label.h:347
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_ORIENTS
Definition: metadata_label.h:733
MDL_HALF2
Half map/image file name (string)
Definition: metadata_label.h:244
BUFFER_61
Definition: metadata_label.h:899
RLN_PIPELINE_PROCESS_TYPE
Definition: metadata_label.h:781
MDL_NMA_COLLECTIVITY
NMA Collectivity of a given mode.
Definition: metadata_label.h:311
MDL_CTF_ENV_R0
CTF Envelope polynomial parameter.
Definition: metadata_label.h:164
RLN_OPTIMISER_AVAILABLE_MEMORY
Definition: metadata_label.h:661
MDL_LOCAL_ALIGNMENT_PATCHES
Two values representing number of patches used for local alignment (X, Y)
Definition: metadata_label.h:270
RLN_PARTICLE_NR_FRAMES
Definition: metadata_label.h:767
RLN_IMAGE_DATATYPE
Definition: metadata_label.h:552
RLN_ORIENT_TILT
Definition: metadata_label.h:750
BUFFER_36
Definition: metadata_label.h:874
MDL_SELFILE
Name of an image (std::string)
Definition: metadata_label.h:429
MDL_ANGLE_PSI_DIFF
difference between psi angles (double,degrees)
Definition: metadata_label.h:54
MDL_LOCAL_ALIGNMENT_CONF_97_5_PERC
A shift amount at confidence level of 95.5%.
Definition: metadata_label.h:274
MDL_CRYSTAL_ORTHO_PRJ
< Shift file for crystal projection
Definition: metadata_label.h:106
MDL_CRYSTAL_PROJ
<Orthogonal projection or not (bool)
Definition: metadata_label.h:107
BUFFER_57
Definition: metadata_label.h:895
MDL_FIRST_LABEL
The label MDL_OBJID is special and should not be used.
Definition: metadata_label.h:47
MDL_SCORE_BY_PCA_RESIDUAL
Definition: metadata_label.h:407
RLN_MICROGRAPH_ID
Definition: metadata_label.h:592
BUFFER_56
Definition: metadata_label.h:894
MDL_CTF_ENV_R1
CTF Envelope polynomial parameter.
Definition: metadata_label.h:165
MDL_CTF_Q0
Inelastic absorption.
Definition: metadata_label.h:162
MDL_RESOLUTION_FREQ2
Frequency in 1/A squared (double)
Definition: metadata_label.h:389
MDL_CTF_CRIT_PSDRADIALINTEGRAL
Integral of the radial PSD.
Definition: metadata_label.h:196
type
viol type
Definition: numerical_recipes.cpp:5198
MDL_OPTICALFLOW_STDY
Standard deviation of the movement in y direction of the motion map> (double)
Definition: metadata_label.h:331
MDL_SAMPLINGRATE_ORIGINAL
original sampling rate in A/pixel (double)
Definition: metadata_label.h:399
BUFFER_92
Definition: metadata_label.h:930
MDL_WEIGHT_JUMPER2
Weight due to angular jumping.
Definition: metadata_label.h:485
MDL_VOLUME_SCORE_SUM_TH
< Score corresponding to the sum of cc with cc>threshold
Definition: metadata_label.h:473
MDL_CTF_BG_SQRT_U
CTF Background parameter.
Definition: metadata_label.h:174
MDL_SPH_DEFORMATION
Deformation in voxels.
Definition: metadata_label.h:449
BUFFER_48
Definition: metadata_label.h:886
RLN_CTF_DEFOCUS_ANGLE
Defocus angle (degrees)
Definition: metadata_label.h:529
MDL_CONTINUOUS_GRAY_A
a value of continuous assignment
Definition: metadata_label.h:116
MDL_CTF_CRIT_DAMPING
Minimum damping at border.
Definition: metadata_label.h:195
MDL_ORIGIN_Y
Origin for the image in the Y axis (double)
Definition: metadata_label.h:325
metadata_row_sql.h
MDL_CTF_LONGITUDINAL_DISPLACEMENT
Longitudinal displacement.
Definition: metadata_label.h:160
MDL_RESOLUTION_FREQREAL
Frequency in A (double)
Definition: metadata_label.h:390
RLN_OPTIMISER_SGD_SIGMA2FUDGE_HALFLIFE
Definition: metadata_label.h:725
RLN_MLMODEL_NORM_CORRECTION_AVG
Definition: metadata_label.h:630
MDL_YCOOR_TILT
Y component in tilted micrograph (int)
Definition: metadata_label.h:501
RLN_MATRIX_1_2
Definition: metadata_label.h:583
MDL_CRYSTAL_SHIFTX
< Have a crystal projection (bool)
Definition: metadata_label.h:108
MDL_FRAME_ID
Unique id of frame inside a Movie.
Definition: metadata_label.h:238
RLN_POSTPROCESS_GUINIER_VALUE_SHARPENED
Definition: metadata_label.h:804
MDL_CTF_GROUP
group images by defocus
Definition: metadata_label.h:154
MDL::isStack
static bool isStack(const MDLabel label)
Definition: metadata_static.cpp:290
MDL_DEFGROUP
Defocus group.
Definition: metadata_label.h:214
MDL_COST
Cost for the image (double)
Definition: metadata_label.h:90
MDL_NMA_EIGENVAL
NMA Eigenvalue of a given mode.
Definition: metadata_label.h:318
BUFFER_34
Definition: metadata_label.h:872
BUFFER_91
Definition: metadata_label.h:929
MDL::isMetadata
static bool isMetadata(const MDLabel label)
Definition: metadata_static.cpp:275
RLN_ORIENT_ROT
Definition: metadata_label.h:748
RLN_OPTIMISER_SGD_MAX_SUBSETS
Definition: metadata_label.h:729
MDL_CTF_DEFOCUSA
average defocus (Angtroms)
Definition: metadata_label.h:134
MDL_SUBTRACTION_R2
R2 coefficient of subtracted particle.
Definition: metadata_label.h:454
RLN_IMAGE_SIZEY
Definition: metadata_label.h:570
MDL_SCORE_BY_GINI
< Particle variance (double)
Definition: metadata_label.h:426
RLN_OPTIMISER_SMALLEST_CHANGES_OPT_OFFSETS
Definition: metadata_label.h:732
RLN_OPTIMISER_FIX_TAU
Definition: metadata_label.h:687
BUFFER_75
Definition: metadata_label.h:913
RLN_PARTICLE_AUTOPICK_FOM
Definition: metadata_label.h:756
RLN_OPTIMISER_DO_SKIP_ROTATE
Definition: metadata_label.h:682
RLN_POSTPROCESS_FSC_TRUE
Definition: metadata_label.h:794
MDL_VOLUME_SCORE4
< Score 3 for volumes
Definition: metadata_label.h:479
MDL_SCORE_BY_SCREENING
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:423
RLN_POSTPROCESS_FSC_MASKED
Definition: metadata_label.h:795
RLN_OPTIMISER_HELICAL_TUBE_INNER_DIAMETER
Definition: metadata_label.h:694
MDL_ANGLE_Y
Angle between y-axis and tilt-axis (double, degrees) for untilted micrographs.
Definition: metadata_label.h:66
MDL_PICKING_STATE
State for particle picking.
Definition: metadata_label.h:346
MDL_PICKING_MANUALPARTICLES_SIZE
Number of manual particles picked.
Definition: metadata_label.h:351
RLN_CTF_CONVERGENCE_CONE
Convergence cone.
Definition: metadata_label.h:539
RLN_MICROGRAPH_TILT_AXIS_DIRECTION
Definition: metadata_label.h:597
MDL::isVolume
static bool isVolume(const MDLabel label)
MDL_XCOOR
X component (int)
Definition: metadata_label.h:496
MDL_FLIP
Flip the image? (bool)
Definition: metadata_label.h:236
RLN_IMAGE_DIMENSIONALITY
Definition: metadata_label.h:553
MDL_TOMOGRAMMD
Name for a Metadata file (std::string)
Definition: metadata_label.h:461
BUFFER_77
Definition: metadata_label.h:915
MDL::isTextFile
static bool isTextFile(const MDLabel label)
Definition: metadata_static.cpp:270
RLN_OPTIMISER_SGD_WRITE_EVERY_SUBSET
Definition: metadata_label.h:728
MDL_MICROGRAPH_MOVIE
Name of a movie (std::string)
Definition: metadata_label.h:286
MDL_DM3_SIZE
Definition: metadata_label.h:225
MDL_CTF_CRIT_NORMALITY
Normality test between histogram of micrography and gaussian distribution.
Definition: metadata_label.h:202
RLN_MASK_NAME
Definition: metadata_label.h:580
MDL_LAST_LABEL
Definition: metadata_label.h:939
RLN_OPTIMISER_HAS_CONVERGED
Definition: metadata_label.h:688
BUFFER_22
Definition: metadata_label.h:860
RLN_SAMPLING_PERTURB
Definition: metadata_label.h:816
TAGLABEL_CTFPARAM
Definition: metadata_label.h:967
RLN_OPTIMISER_DO_CORRECT_NORM
Definition: metadata_label.h:674
RLN_IMAGE_ID
Definition: metadata_label.h:550
MDL_CLASSIFICATION_DATA_SIZE
Size of data vectors for classification (int)
Definition: metadata_label.h:84
MDL_MLF_SIGNAL
MLF signal (double)
Definition: metadata_label.h:303
MDL_PRJ_DIMENSIONS
< Number of non-redundant projections directions (size_t)
Definition: metadata_label.h:355
MDL::isLong
static bool isLong(const MDLabel label)
Definition: metadata_static.cpp:208
BUFFER_88
Definition: metadata_label.h:926
RLN_PARTICLE_FOM
Definition: metadata_label.h:760
RLN_ORIENT_ORIGIN_Y
Definition: metadata_label.h:744
RLN_OPTIMISER_HELICAL_Z_PERCENTAGE
Definition: metadata_label.h:693
MDL_MICROGRAPH_MOVIE_ID
Unique identifier of a movie.
Definition: metadata_label.h:287
MDL_CTF_BG_GAUSSIAN_SIGMAU
CTF Background parameter.
Definition: metadata_label.h:168
RLN_CTF_PHASESHIFT
Phase-shift from a phase-plate (in degrees)
Definition: metadata_label.h:546
MDL_CL2D_CHANGES
Number of changes between iterations.
Definition: metadata_label.h:79
MDL_PMAX
Maximum value of normalized probability function (now called "Pmax/sumP") (double) ...
Definition: metadata_label.h:352
MDL_COUNT2
Number of elements of a type (int) [this is a genereic type do not use to transfer information to ano...
Definition: metadata_label.h:93
MDL_CTF_BG_SQRT_ANGLE
CTF Background parameter.
Definition: metadata_label.h:176
RLN_OPTIMISER_CHANGES_OPTIMAL_CLASSES
Definition: metadata_label.h:665
MDL_SPH_TSNE_COEFF1D
Definition: metadata_label.h:450
MDL_IMAGE2
Image associated to this object (std::string)
Definition: metadata_label.h:256
MDL_SUMWEIGHT
Sum of all weights in ML model.
Definition: metadata_label.h:458
RLN_OPTIMISER_OUTPUT_ROOTNAME
Definition: metadata_label.h:716
MDL::getNewAlias
static MDLabel getNewAlias(const String &alias, MDLabelType type=LABEL_NOTYPE)
Definition: metadata_static.cpp:102
MDL_CTF_XRAY_ZONES_NUMBER
Outermost zone width of the X-ray Fresnel lens (nm)
Definition: metadata_label.h:209
MDL_NMA
Normal mode displacements (vector double)
Definition: metadata_label.h:310
MDL_CTF_CRIT_MAXFREQ
Maximum frequency at which the envelope drops below 0.1 (in Angstroms)
Definition: metadata_label.h:194
MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_RATIO
Ratio sigma(firstMinimum)/sigma(firstZero)
Definition: metadata_label.h:190
RLN_CTF_ENERGY_LOSS
Energy loss.
Definition: metadata_label.h:533
MDL_CTF_BG_R1
CTF Background polynomial parameter.
Definition: metadata_label.h:184
MDL_SCORE_BY_VAR
Definition: metadata_label.h:425
MDL_SIGMANOISE
Standard deviation of the noise in ML model.
Definition: metadata_label.h:445
MDL_HALF1
Half map/image 1 file name (string)
Definition: metadata_label.h:243
RLN_ORIENT_ORIGIN_Z_PRIOR
Definition: metadata_label.h:747
RLN_ORIENT_ROT_PRIOR
Definition: metadata_label.h:749
MDL_DIMRED
Projection onto a reduced manifold (vector double)
Definition: metadata_label.h:215
BUFFER_16
Definition: metadata_label.h:854
RLN_OPTIMISER_INCR_SIZE
Definition: metadata_label.h:703
MDL::emptyHeaderSql
static MDRowSql emptyHeaderSql()
Definition: metadata_static.cpp:305
MDL_AVGPMAX
Average change in class assignment(double dimensionaless)
Definition: metadata_label.h:74
MDL_WEIGHT_PHASECORR
Weight due phase correlation between two images/subtomos.
Definition: metadata_label.h:487
RLN_OPTIMISER_DO_MAP
Definition: metadata_label.h:678
BUFFER_87
Definition: metadata_label.h:925
RLN_PARTICLE_KL_DIVERGENCE
Definition: metadata_label.h:761
BUFFER_49
Definition: metadata_label.h:887
MDL_IMAGE_RESIDUAL
Name of a residual image associated to this image.
Definition: metadata_label.h:251
MDL_NOISE_PIXEL_LEVEL
Noise description for pixels&#39; gray level (when projecting)
Definition: metadata_label.h:322
BUFFER_06
Definition: metadata_label.h:844
MDL_IMAGE1
Image associated to this object (std::string)
Definition: metadata_label.h:255
RLN_OPTIMISER_DATA_ARE_CTF_PREMULTIPLIED
Definition: metadata_label.h:668
MDL_INTSCALE
Intensity scale for an image.
Definition: metadata_label.h:260
MDL_CLASSIFICATION_FRC_05
Digital frequency at which the FRC drops below 0.5 (double)
Definition: metadata_label.h:87
BUFFER_11
Definition: metadata_label.h:849
BUFFER_30
Definition: metadata_label.h:868
MDL_ZSCORE_HISTOGRAM
Z Score (double)
Definition: metadata_label.h:508
MDL_MAXCC
Maximum cross-correlation for the image (double)
Definition: metadata_label.h:280
MDL_MICROGRAPH_ID
Micrograph unique id for reference (MDL_ITEM_ID should be used for Micrographs list) ...
Definition: metadata_label.h:285
TAGLABEL_MICROGRAPH
Definition: metadata_label.h:971
MDL::emptyHeaderVec
static MDRowVec emptyHeaderVec()
Definition: metadata_static.cpp:313
RLN_ORIENT_PSI_PRIOR_FLIP_RATIO
Definition: metadata_label.h:754
RLN_OPTIMISER_DO_CORRECT_MAGNIFICATION
Definition: metadata_label.h:673
MDL_MASK
Name of a mask associated to image.
Definition: metadata_label.h:279
MDL_CTF_DEFOCUS_R2
Defocus coefficient of determination.
Definition: metadata_label.h:138
BUFFER_01
Definition: metadata_label.h:839
MDL_CTF_BG_SQRT_V
CTF Background parameter.
Definition: metadata_label.h:175
RLN_PARTICLE_ORI_NAME
Definition: metadata_label.h:765
BUFFER_32
Definition: metadata_label.h:870
MDL_MODELFRAC
Model fraction (alpha_k) for a Maximum Likelihood model.
Definition: metadata_label.h:306
MDL_MISSINGREGION_NR
Number of missing region in subtomogram.
Definition: metadata_label.h:294
MDL_SCALE
scaling factor for an image or volume (double)
Definition: metadata_label.h:404
BUFFER_15
Definition: metadata_label.h:853
BUFFER_42
Definition: metadata_label.h:880
MDL_ZSCORE_RESMEAN
Z Score of the mean of the residuals (double)
Definition: metadata_label.h:509
RLN_MLMODEL_CURRENT_RESOLUTION
Definition: metadata_label.h:603
MDL_TIME
Definition: metadata_label.h:234
RLN_CTF_IMAGE
name of an image describing the CTF model
Definition: metadata_label.h:535
MDL_MICROGRAPH
Name of a micrograph (std::string)
Definition: metadata_label.h:284
MDL_CTF_ENVELOPE_PLOT
Definition: metadata_label.h:157
MDL_PHANTOM_BGDENSITY
Phantom background density (double)
Definition: metadata_label.h:334
RLN_OPTIMISER_BEST_RESOL_THUS_FAR
Definition: metadata_label.h:662
RLN_MLMODEL_ORIENTABILITY_CONTRIBUTION
Definition: metadata_label.h:635
MDL_LOCAL_ALIGNMENT_COEFFS_X
BSpline coefficient in X dim.
Definition: metadata_label.h:271
RLN_IMAGE_SAMPLINGRATE
Definition: metadata_label.h:564
RLN_MLMODEL_HELICAL_TWIST
Definition: metadata_label.h:618
RLN_CTF_MAXRES
Maximum resolution with Thon rings.
Definition: metadata_label.h:538
MDL_DM3_IDTAG
Definition: metadata_label.h:219
MDL_CTF_PHASE_SHIFT
Definition: metadata_label.h:210
RLN_MATRIX_2_1
Definition: metadata_label.h:585
MDL_CL2D_SIMILARITY
Average cross-correlation for the image (double)
Definition: metadata_label.h:80
MDL_SCORE_BY_ALIGNABILITY_ACCURACY_EXP
score by alignability experimental particles (double)
Definition: metadata_label.h:413
RLN_MLMODEL_SIGMA2_NOISE
Definition: metadata_label.h:650
BUFFER_89
Definition: metadata_label.h:927
MDL_PHANTOM_FEATURE_TYPE
Type of the feature (Sphere, Blob, ...) (std::string)
Definition: metadata_label.h:339
MDL_CTF_DEFOCUS_PLANEUB
Defocus = A*x+B*y+C.
Definition: metadata_label.h:146
MDL_PRJ_PSI_RANDSTR
< Psi angle dev and mean noise (vector double)
Definition: metadata_label.h:358
MDL_KSTEST
KS-test statistics.
Definition: metadata_label.h:268
RLN_SORTED_IDX
Definition: metadata_label.h:827
MDL::isPSD
static bool isPSD(const MDLabel label)
Definition: metadata_static.cpp:300
BUFFER_76
Definition: metadata_label.h:914
RLN_POSTPROCESS_GUINIER_FIT_INTERCEPT
Definition: metadata_label.h:799
BUFFER_10
Definition: metadata_label.h:848
MDL_CUMULATIVE_SSNR
Cumulative SSNR (double)
Definition: metadata_label.h:212
RLN_POSTPROCESS_AMPLCORR_MASKED
Definition: metadata_label.h:787
MDL_IMAGE4
Image associated to this object (std::string)
Definition: metadata_label.h:258
MDL_CTF_CRIT_FIRSTZERODISAGREEMENT
First zero disagreement with second model (in Angstroms)
Definition: metadata_label.h:193
MDL_ANGLE_PSI2
Psi angle of an image (double,degrees)
Definition: metadata_label.h:52
MDL_CTF_DATA_PHASE_FLIPPED
Definition: metadata_label.h:126
MDL_CTF_CRIT_PSDPCARUNSTEST
Runs test on the projection of the PSD on the first principal component.
Definition: metadata_label.h:201
MDL_CTF_BG_GAUSSIAN_CU
CTF_ CTF Background parameter.
Definition: metadata_label.h:170
MDL_XCOOR_TILT
X component in tilted micrograph (int)
Definition: metadata_label.h:497
RLN_ORIENT_ORIGIN_X_PRIOR
Definition: metadata_label.h:743
MDL_SIGMAOFFSET
Standard deviation of the offsets in ML model.
Definition: metadata_label.h:446
BUFFER_45
Definition: metadata_label.h:883
MDL_CTF_XRAY_LENS_TYPE
Wavelength (nm)
Definition: metadata_label.h:207
RLN_OPTIMISER_WIDTH_MASK_EDGE
Definition: metadata_label.h:738
RLN_MICROGRAPH_NAME
Definition: metadata_label.h:594
MDL_MISSINGREGION_TYPE
Type of missing region in subtomogram.
Definition: metadata_label.h:295
RLN_MLMODEL_AVE_PMAX
Definition: metadata_label.h:602
MDL_SCORE_BY_ZSCORE
Definition: metadata_label.h:428
LABEL_NOTYPE
Definition: metadata_label.h:950
MDL_ZCOOR
Z component (int)
Definition: metadata_label.h:504
RLN_POSTPROCESS_FSC_UNMASKED
Definition: metadata_label.h:796
MDL_REF3D
3D Class to which the image belongs (int)
Definition: metadata_label.h:376
MDL_RESOLUTION_FREQ
Frequency in 1/A (double)
Definition: metadata_label.h:388
RLN_POSTPROCESS_FSC_GENERAL
Definition: metadata_label.h:793
BUFFER_46
Definition: metadata_label.h:884
MDL_ANGLE_DIFF
difference between two angles (double,degrees)
Definition: metadata_label.h:64
RLN_PIPELINE_PROCESS_NAME
Definition: metadata_label.h:780
MDL_POINTSASYMETRICUNIT
Definition: metadata_label.h:353
MDL_PARTICLE_ID
Particle unique identifier for reference. (The MDL_ITEM_ID should be used when particle list) ...
Definition: metadata_label.h:333
BUFFER_98
Definition: metadata_label.h:936
MDL_WEIGHT_SSNR
Weight due to SSNR.
Definition: metadata_label.h:489
RLN_MLMODEL_ACCURACY_TRANS
Definition: metadata_label.h:601
MDL_OPTICALFLOW_STDX
Standatd deviation of the movement in x direction of the motion map> (double)
Definition: metadata_label.h:330
RLN_IMAGE_BEAMTILT_Y
Definition: metadata_label.h:555
MDL_MAXCC_PREVIOUS
Correlation from previous alignment.
Definition: metadata_label.h:283
RLN_MATRIX_3_2
Definition: metadata_label.h:589
BUFFER_78
Definition: metadata_label.h:916
MDL_IMAGE_COVARIANCE
Name of the covariance imagee associated to this image.
Definition: metadata_label.h:247
BUFFER_81
Definition: metadata_label.h:919
RLN_SAMPLING_SYMMETRY
Definition: metadata_label.h:823
MDL_CTF_DOWNSAMPLE_PERFORMED
Downsampling performed to estimate the CTF.
Definition: metadata_label.h:204
MDL_USER
Definition: metadata_label.h:369
RLN_MLMODEL_GROUP_SCALE_CORRECTION
Definition: metadata_label.h:616
MDL_KEYWORDS
Keywords associated to this line, should be a single string block (do not use spaces as separators) ...
Definition: metadata_label.h:266
RLN_CTF_DETECTOR_PIXEL_SIZE
Pixel size for detector as used in CTF-determination.
Definition: metadata_label.h:532
MDL_PHANTOM_FEATURE_OPERATION
Operation in case of overlapping features (+,-)
Definition: metadata_label.h:337
RLN_IMAGE_ORI_NAME
Definition: metadata_label.h:563
MDL_CTF_BG_GAUSSIAN2_CV
CTF Background parameter.
Definition: metadata_label.h:182
RLN_OPTIMISER_ACCURACY_TRANS
Definition: metadata_label.h:657
RLN_OPTIMISER_FIX_SIGMA_OFFSET
Definition: metadata_label.h:686
MDL_PHANTOM_FEATURE_SPECIFIC
Specific parameters for a feature (vector double)
Definition: metadata_label.h:338
BUFFER_68
Definition: metadata_label.h:906
RLN_PARTICLE_NAME
Definition: metadata_label.h:764
MDL::isString
static bool isString(const MDLabel label)
Definition: metadata_static.cpp:218
RLN_MICROGRAPH_NAME_WODOSE
Definition: metadata_label.h:595
RLN_IMAGE_WEIGHT
Definition: metadata_label.h:578
MDL_SCORE_BY_ALIGNABILITY_NOISE
score by alignability noise (double)
Definition: metadata_label.h:415
MDL_PSD_ENHANCED
A enhanced Power Spectrum Density file name (std::string)
Definition: metadata_label.h:374
MDL_SUBTRACTION_BETA0
Beta 0 coefficient of adjusted model for subtract particle.
Definition: metadata_label.h:455
MDL_REF
Class to which the image belongs (int)
Definition: metadata_label.h:377
RLN_SAMPLING_HEALPIX_ORDER
Definition: metadata_label.h:811
MDL_PHANTOM_FEATURE_CENTER
Center of the feature (vector double)
Definition: metadata_label.h:335
MDL_SAMPLINGRATE
rfactor
Definition: metadata_label.h:398
RLN_OPTIMISER_HELICAL_TWIST_INITIAL
Definition: metadata_label.h:691
BUFFER_28
Definition: metadata_label.h:866
RLN_MLMODEL_GROUP_NR_PARTICLES
Definition: metadata_label.h:615
MDL_CTF_DEFOCUS_RESIDUAL
Difference between the observed defocus value and the estimated defocus value.
Definition: metadata_label.h:140
LABEL_BOOL
Definition: metadata_label.h:952
MDL_CTF_CRIT_PSDPCA1VARIANCE
Variance in the first principal component of the PSDs.
Definition: metadata_label.h:200
MDL_WEIGHT_CONTINUOUS2
Weight due to angular continuous assignment.
Definition: metadata_label.h:482
MDL_MAPTOPOLOGY
Magnification of microscope.
Definition: metadata_label.h:278
RLN_MLMODEL_GROUP_NO
Definition: metadata_label.h:614
MDL_NEIGHBORS
Vector of indexes to points some "neighbors".
Definition: metadata_label.h:307
MDL_SHIFT_X2
Shift for the image in the X axis (double)
Definition: metadata_label.h:432
MDL_NMA_ENERGY
NMA energy contained in the NMA displacement vector.
Definition: metadata_label.h:313
BUFFER_03
Definition: metadata_label.h:841
RLN_MLMODEL_FSC_HALVES_REF
Definition: metadata_label.h:612
RLN_POSTPROCESS_GUINIER_FIT_CORRELATION
Definition: metadata_label.h:798
RLN_IMAGE_BEAMTILT_GROUP
Definition: metadata_label.h:556
RLN_MLMODEL_FOURIER_COVERAGE_TOTAL_REF
Definition: metadata_label.h:611
RLN_CTF_FOM
ctffind3 FOM (CC) for quality of CTF-fit
Definition: metadata_label.h:534
BUFFER_20
Definition: metadata_label.h:858
LABEL_SIZET
Definition: metadata_label.h:956
RLN_MLMODEL_NR_GROUPS
Definition: metadata_label.h:633
RLN_PARTICLE_MOVIE_RUNNING_AVG
Definition: metadata_label.h:762
BUFFER_31
Definition: metadata_label.h:869
RLN_MLMODEL_CURRENT_SIZE
Definition: metadata_label.h:604
MDL_CONTINUOUS_GRAY_B
b value of continuous assignment
Definition: metadata_label.h:117
MDL_XSIZE
X size (int)
Definition: metadata_label.h:498
BUFFER_53
Definition: metadata_label.h:891
MDL_ZSCORE
Global Z Score (double)
Definition: metadata_label.h:505
RLN_POSTPROCESS_FSC_RANDOM_MASKED
Definition: metadata_label.h:797
MDL_CLASS_COUNT
Number of images assigned to the same class as this image.
Definition: metadata_label.h:81
MDL_CRYSTAL_DISAPPEAR_THRE
< Lattice vector for projection (vector double)
Definition: metadata_label.h:104
MDL_IMGMD
Name of Metadata file for all images (string)
Definition: metadata_label.h:254
RLN_OPTIMISER_RADIUS_MASK_EXP_PARTICLES
Definition: metadata_label.h:719
RLN_POSTPROCESS_GUINIER_VALUE_IN
Definition: metadata_label.h:801
RLN_IMAGE_NORM_CORRECTION
Definition: metadata_label.h:562
RLN_OPTIMISER_SGD_STEPSIZE
Definition: metadata_label.h:730
RLN_PERFRAME_RELATIVE_WEIGHT
Definition: metadata_label.h:830
BUFFER_33
Definition: metadata_label.h:871
MDL_SCORE_BY_EMPTINESS
Small values represent worse particles. Much larger than 1 for good particles.
Definition: metadata_label.h:416
MDL_CTF_MODEL2
Name for another CTF model (std::string)
Definition: metadata_label.h:130
MDL_SCORE_BY_MIRROR
score by mirror (double)
Definition: metadata_label.h:421
BUFFER_97
Definition: metadata_label.h:935
MDL_Y
Y component (double)
Definition: metadata_label.h:499
MDL_OPTICALFLOW_MEANX
Mean of the movement in x direction of the motion map> (double)
Definition: metadata_label.h:328
RLN_AREA_ID
ID for the area (or field of view). If one does not use (tilt) series, area would be the same as micr...
Definition: metadata_label.h:519
BUFFER_82
Definition: metadata_label.h:920
MDL_MLF_CTF
MLF CTF estimated value (double)
Definition: metadata_label.h:301
RLN_POSTPROCESS_GUINIER_VALUE_INVMTF
Definition: metadata_label.h:802
BUFFER_23
Definition: metadata_label.h:861
MDL_CTF_CRIT_ICENESS
Iceness of the micrograph.
Definition: metadata_label.h:203
MDL::label2SqlColumn
static String label2SqlColumn(const MDLabel label)
Definition: metadata_static.cpp:150
MDL_RESOLUTION_ERRORL2
Error in l2 (double)
Definition: metadata_label.h:385
RLN_OPTIMISER_DO_REALIGN_MOVIES
Definition: metadata_label.h:677
RLN_IMAGE_SIZEX
Definition: metadata_label.h:569
String
std::string String
Definition: xmipp_strings.h:34
MDL_RESOLUTION_FRCRANDOMNOISE
Fourier shell correlation noise (double)
Definition: metadata_label.h:387
RLN_MLMODEL_ESTIM_RESOL_REF
Definition: metadata_label.h:609
MDL_MAXCC_PERCENTILE
Percentile of the maximum cross-correlation for the image (double)
Definition: metadata_label.h:281
MDL_SPH_COEFFICIENTS
Deformation coefficients.
Definition: metadata_label.h:448
MDL::isDouble
static bool isDouble(const MDLabel label)
Definition: metadata_static.cpp:223
BUFFER_26
Definition: metadata_label.h:864
MDL_MICROGRAPH_TILTED
Name of the corresponding tilted micrograph (std::string)
Definition: metadata_label.h:290
MDL_CLASSIFICATION_DATA
Data vector for classification (vector double)
Definition: metadata_label.h:83
RLN_MLMODEL_SIGMA2_REF
Definition: metadata_label.h:651
MDL_ANGLE_ROT3
Rotation angle of an image (double,degrees)
Definition: metadata_label.h:57
MDL_VOLUME_SCORE1
Definition: metadata_label.h:476
MDL_TRANSFORM_MATRIX
transformation matrix in numpy string format or space separated (std::string)
Definition: metadata_label.h:462
RLN_IMAGE_NAME
Definition: metadata_label.h:548
MDL_SCORE_BY_RAMP
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:422
RLN_OPTIMISER_IGNORE_HELICAL_SYMMETRY
Definition: metadata_label.h:699
RLN_MATRIX_3_1
Definition: metadata_label.h:588
MDL_FOM
Figure of Merit in 0-1 range (double)
Definition: metadata_label.h:237
RLN_PIPELINE_JOB_COUNTER
Definition: metadata_label.h:776
MDL_SHIFT_Z
Shift for the image in the Z axis (double)
Definition: metadata_label.h:439
RLN_ORIENT_FLIP
Definition: metadata_label.h:740
RLN_OPTIMISER_DO_ZERO_MASK
Definition: metadata_label.h:684
RLN_MLMODEL_PRIOR_OFFX_CLASS
Definition: metadata_label.h:638
MDL_AVG_CHANGES_OFFSETS
Average change in angular orientation (double degrees)
Definition: metadata_label.h:72
RLN_OPTIMISER_DO_CORRECT_SCALE
Definition: metadata_label.h:675
MDL_X
X component (double)
Definition: metadata_label.h:495
RLN_PIPELINE_EDGE_TO
Definition: metadata_label.h:784
BUFFER_74
Definition: metadata_label.h:912
RLN_MLMODEL_FOURIER_COVERAGE_REF
Definition: metadata_label.h:610
MDL_LOCAL_AVERAGE
average value in the micrograph (double)
Definition: metadata_label.h:276
MDL_IDX
Index within a list (size_t)
Definition: metadata_label.h:245
MDL::hasTag
static bool hasTag(const MDLabel label, const int tags)
Definition: metadata_static.cpp:265
MDL_MISSINGREGION_THYF
Final tilt angle in Y for missing region in subtomogram.
Definition: metadata_label.h:297
MDL_ANGLE_TEMPERATURE
Angular temperature (double,degrees)
Definition: metadata_label.h:68
MDL_CLASS_INTERSECTION_RELATIVE_SIZE_PVALUE
P-value (1-percentile) of the relative class size (size/max(original_classes)) compared to a random d...
Definition: metadata_label.h:98
MDL_CTF_BG_BASELINE
CTF Background parameter.
Definition: metadata_label.h:177
MDL_DIMENSIONS_3D
Definition: metadata_label.h:371
MDL_DM3_TAGNAME
Definition: metadata_label.h:224
MDL_ANGLE_DIFF2
difference between two angles (double,degrees)
Definition: metadata_label.h:65
RLN_OPTIMISER_NR_ITERATIONS
Definition: metadata_label.h:713
MDL_PROGRAM
Definition: metadata_label.h:368
RLN_IMAGE_SIZEZ
Definition: metadata_label.h:571
BUFFER_65
Definition: metadata_label.h:903
RLN_MLMODEL_PDF_ORIENT
Definition: metadata_label.h:640
MDL_PICKING_AUTOPICKPERCENT
Definition: metadata_label.h:348
RLN_SAMPLING_IS_3D
Definition: metadata_label.h:809
MDL_WEIGHT_PRECISION_MIRROR
Weight due to Mirror Precision.
Definition: metadata_label.h:493
MDL_PRJ_ROT_RANGE
< Type of randomness for Rotational (std::string)
Definition: metadata_label.h:362
MDL_WEIGHT_ACCURACY_ALIGNABILITY
Weight due to Alignability Accuracy.
Definition: metadata_label.h:492
MDL_VOLUME_SCORE2
< Score 1 for volumes
Definition: metadata_label.h:477
MDL_DM3_PARENTID
Definition: metadata_label.h:222
MDL_CTF_X0
The CTF is valid within (x0,y0) to (xF,yF) in the micrograph coordinates.
Definition: metadata_label.h:141
MDL_CONTINUOUS_SCALE_X
scale x of continuous assignment
Definition: metadata_label.h:119
MDL_CORR_DENOISED_NOISY
Correlation between the denoised image and the noisy version.
Definition: metadata_label.h:95
MDL_APPLY_SHIFT
Apply shift when project the volume ,.
Definition: metadata_label.h:69
RLN_OPTIMISER_SOLVENT_MASK2_NAME
Definition: metadata_label.h:735
MDL_KERDENSOM_REGULARIZATION
Regularization value (double)
Definition: metadata_label.h:264
MDL_ORIGIN_Z
Origin for the image in the Z axis (double)
Definition: metadata_label.h:326
MDL_AVG
average value (double)
Definition: metadata_label.h:70
RLN_MLMODEL_SGD_GRADIENT_IMAGE
Definition: metadata_label.h:644
MDL_PRJ_TILT_NOISE
Definition: metadata_label.h:363
RLN_OPTIMISER_DO_AUTO_REFINE
Definition: metadata_label.h:670
MDL_ANGLE_TILT_DIFF
difference between tilt angles (double,degrees)
Definition: metadata_label.h:62
MDL::str2LabelVector
static void str2LabelVector(const String &labelsStr, std::vector< MDLabel > &labels)
Definition: metadata_static.cpp:120
RLN_MICROGRAPH_TILT_AXIS_OUTOFPLANE
Definition: metadata_label.h:598
MDL_CTF_ENERGY_LOSS
Energy loss.
Definition: metadata_label.h:155
MDL_CLASSIFICATION_INTRACLASS_DISTANCE
Average intraclass distance (double)
Definition: metadata_label.h:86
MDL::label2Str
static String label2Str(const MDLabel &label)
Definition: metadata_static.cpp:139
RLN_OPTIMISER_AUTO_LOCAL_HP_ORDER
Definition: metadata_label.h:660
LABEL_DOUBLE
Definition: metadata_label.h:953
RLN_SELECTED
Definition: metadata_label.h:825
MDL_DIRECTION
Direction in 3D.
Definition: metadata_label.h:216
MDL_SCORE_BY_ALIGNABILITY
score by alignability (double)
Definition: metadata_label.h:408
MDL_YCOOR
Y component (int)
Definition: metadata_label.h:500
MDL_CTF_DEFOCUS_CHANGE
Defocus change with respect to previous defoucs (Angstroms)
Definition: metadata_label.h:137
BUFFER_50
Definition: metadata_label.h:888
MDL_ZSCORE_RESVAR
Z Score of the stddev of the residuals (double)
Definition: metadata_label.h:510
MDL_MISSINGREGION_THXF
Final tilt angle in X for missing region in subtomogram.
Definition: metadata_label.h:299
RLN_PIPELINE_PROCESS_ALIAS
Definition: metadata_label.h:779
RLN_IMAGE_COORD_X
Definition: metadata_label.h:557
MDL_CTF_CRIT_FIRSTMINIMUM_FIRSTZERO_DIFF_RATIO
Ratio sigma(firstMinimum-firstZero)/sigma(firstZero)
Definition: metadata_label.h:191
MDL_CTF_BG_R2
CTF Background polynomial parameter.
Definition: metadata_label.h:185
MDL_MIRRORFRAC
Mirror fraction for a Maximum Likelihood model.
Definition: metadata_label.h:293
RLN_MLMODEL_DIMENSIONALITY
Definition: metadata_label.h:606
BUFFER_13
Definition: metadata_label.h:851
RLN_MLMODEL_PRIOR_OFFY_CLASS
Definition: metadata_label.h:639
RLN_MLMODEL_ORIGINAL_SIZE
Definition: metadata_label.h:634
BUFFER_02
Definition: metadata_label.h:840
MDL_GRAPH_DISTANCE2MAX_PREVIOUS
when previous assignment validation
Definition: metadata_label.h:240
MDL_WEIGHT_JUMPER0
Weight due to angular jumping.
Definition: metadata_label.h:483
RLN_IMAGE_SAMPLINGRATE_Z
Definition: metadata_label.h:567
MDL_NMA_MINRANGE
Minimum value observed for a given NMA mode.
Definition: metadata_label.h:314
RLN_POSTPROCESS_DPR_MASKED
Definition: metadata_label.h:790
MDL_SHIFT_Y
Shift for the image in the Y axis (double)
Definition: metadata_label.h:435
MDL::addLabelAlias
static void addLabelAlias(MDLabel label, const String &alias, bool replace=false, MDLabelType type=LABEL_NOTYPE)
Definition: metadata_static.cpp:90
RLN_OPTIMISER_HIGHRES_LIMIT_SGD
Definition: metadata_label.h:698
MDL_NEIGHBORHOOD_RADIUS
Radius of the neighborhood (radians)
Definition: metadata_label.h:309
MDL_CTF_ENVELOPE
Definition: metadata_label.h:156
MDL_BFACTOR
Definition: metadata_label.h:75
MDL_SHIFT_Z2
Shift for the image in the Z axis (double)
Definition: metadata_label.h:440
BUFFER_09
Definition: metadata_label.h:847
MDL_ZSCORE_RESCOV
Z Score of the covariance matrix of the residuals (double)
Definition: metadata_label.h:511
MDL_CTF_LAMBDA
Definition: metadata_label.h:206
MDL_CRYSTAL_SHFILE
< Disappearing threshold (double)
Definition: metadata_label.h:105
RLN_CTF_TRANSVERSAL_DISPLACEMENT
Transversal displacemente.
Definition: metadata_label.h:541
RLN_OPTIMISER_HAS_HIGH_FSC_AT_LIMIT
Definition: metadata_label.h:689
MDL_SHIFT_DIFF
shift difference (double)
Definition: metadata_label.h:443
MDL_DM3_TAGCLASS
Definition: metadata_label.h:223
RLN_OPTIMISER_ADAPTIVE_OVERSAMPLING
Definition: metadata_label.h:659
RLN_PARTICLE_NR_SIGNIFICANT_SAMPLES
Definition: metadata_label.h:766
RLN_MLMODEL_ACCURACY_ROT
Definition: metadata_label.h:600
RLN_STARFILE_MOVIE_PARTICLES
Definition: metadata_label.h:828
MDL_PRJ_ROT_NOISE
< Psi angle range (vector double)
Definition: metadata_label.h:360
MDL_ITER
Current iteration number (int)
Definition: metadata_label.h:262
RLN_POSTPROCESS_BFACTOR
Definition: metadata_label.h:789
RLN_CTF_CS
Spherical aberration.
Definition: metadata_label.h:530
MDL_PRJ_TILT_RANDSTR
< Tilt angle dev and mean noise (vector double)
Definition: metadata_label.h:364
MDL_CTF_DEFOCUSV
Defocus V (Angstroms)
Definition: metadata_label.h:136
RLN_RESOLUTION_ANGSTROM
Definition: metadata_label.h:833
BUFFER_96
Definition: metadata_label.h:934
MDL_CTF_CA
Chromatic aberration.
Definition: metadata_label.h:153
MDL_CTF_TRANSVERSAL_DISPLACEMENT
Transversal displacemente.
Definition: metadata_label.h:161
RLN_MLMODEL_PIXEL_SIZE
Definition: metadata_label.h:641
MDL_MLF_WIENER
MLF Wiener filter (double)
Definition: metadata_label.h:302
MDL_GRAPH_CC
Correlation between assigned direction and graph filtered maximum.
Definition: metadata_label.h:241
RLN_OPTIMISER_REFS_ARE_CTF_CORRECTED
Definition: metadata_label.h:721
MDL_NMA_MODEFILE
File with an NMA mode.
Definition: metadata_label.h:316
MDL_ANGLE_PSI3
Psi angle of an image (double,degrees)
Definition: metadata_label.h:53
TAGLABEL_VOLUME
Definition: metadata_label.h:969
RLN_OPTIMISER_ACCURACY_ROT
Definition: metadata_label.h:656
RLN_OPTIMISER_DO_ONLY_FLIP_CTF_PHASES
Definition: metadata_label.h:671
RLN_IMAGE_SAMPLINGRATE_Y
Definition: metadata_label.h:566
MDL_IMAGE
Name of an image (std::string)
Definition: metadata_label.h:246
RLN_MLMODEL_DATA_VS_PRIOR_REF
Definition: metadata_label.h:605
MDL_CTF_LENS_STABILITY
Lens stability.
Definition: metadata_label.h:158
RLN_CTF_MAGNIFICATION
Magnification used for CTF-determination.
Definition: metadata_label.h:537
BUFFER_66
Definition: metadata_label.h:904
RLN_RESOLUTION
Definition: metadata_label.h:832
BUFFER_19
Definition: metadata_label.h:857
BUFFER_39
Definition: metadata_label.h:877
MDLabel
MDLabel
Definition: metadata_label.h:44
MDL_DATE
Definition: metadata_label.h:233
RLN_IMAGE_STATS_MAX
Definition: metadata_label.h:573
RLN_OPTIMISER_DO_HELICAL_REFINE
Definition: metadata_label.h:676
MDL_PRJ_PSI_RANGE
< Type of randomness for Psi (std::string)
Definition: metadata_label.h:359
RLN_OPTIMISER_IGNORE_CTF_UNTIL_FIRST_PEAK
Definition: metadata_label.h:702
RLN_MLMODEL_TAU2_REF
Definition: metadata_label.h:654
BUFFER_69
Definition: metadata_label.h:907
BUFFER_41
Definition: metadata_label.h:879
MDL_IMAGE_REF
Name of of the class image from which MDL_IMAGE is coming from.
Definition: metadata_label.h:250
RLN_MLMODEL_REF_IMAGE
Definition: metadata_label.h:649
TAGLABEL_METADATA
Definition: metadata_label.h:966
RLN_ORIENT_ID
Definition: metadata_label.h:741
MDL_RESOLUTION_STRUCTURE_FACTOR
Structure factor.
Definition: metadata_label.h:395
MDL_PICKING_TEMPLATES
Number of templates.
Definition: metadata_label.h:345
RLN_PARTICLE_RANDOM_SUBSET
Definition: metadata_label.h:763
MDL_COLOR
Color for particle picking.
Definition: metadata_label.h:344
MDL::isVectorLong
static bool isVectorLong(const MDLabel label)
Definition: metadata_static.cpp:233
MDL_DM3_NUMBER_TYPE
Definition: metadata_label.h:221
BUFFER_27
Definition: metadata_label.h:865
RLN_MLMODEL_SIGMA_PSI
Definition: metadata_label.h:648
RLN_PARTICLE_DLL
Definition: metadata_label.h:758
MDL_SCORE_BY_VARIANCE
Feature vectors used to classify particles (vector double)
Definition: metadata_label.h:424
MDL_MLF_NOISE
MLF Wiener filter (double)
Definition: metadata_label.h:304
RLN_IMAGE_STATS_KURT
Definition: metadata_label.h:577
MDL_SUBTRACTION_BETA1
Beta 1 coefficient of adjusted model for subtract particle.
Definition: metadata_label.h:456
MDL_WEIGHT
< Score 4 for volumes
Definition: metadata_label.h:480
MDL_CRYSTAL_CELLX
Cell location for crystals.
Definition: metadata_label.h:100
MDL_IMED
imed value between a particle and its assigned projection
Definition: metadata_label.h:253
BUFFER_25
Definition: metadata_label.h:863
MDL_RESOLUTION_FRC
Fourier shell correlation (double)
Definition: metadata_label.h:386
RLN_OPTIMISER_HELICAL_KEEP_TILT_PRIOR_FIXED
Definition: metadata_label.h:700
BUFFER_94
Definition: metadata_label.h:932
RLN_OPTIMISER_SOLVENT_MASK_NAME
Definition: metadata_label.h:734
RLN_SAMPLING_PERTURBATION_FACTOR
Definition: metadata_label.h:817
RLN_OPTIMISER_CHANGES_OPTIMAL_OFFSETS
Definition: metadata_label.h:663
MDL_CORRELATION_MASK
masked correlation value between a particle and its assigned projection inside the region with pixel ...
Definition: metadata_label.h:123
MDL_CTF_Y0
The CTF is valid within (x0,y0) to (xF,yF) in the micrograph coordinates.
Definition: metadata_label.h:142
MDL_DOSE
Dose e/A^2 (double)
Definition: metadata_label.h:227
RLN_OPTIMISER_SGD_MU
Definition: metadata_label.h:723
MDL_COMMENT
Serve to make annotations on the metadata row.
Definition: metadata_label.h:88
RLN_MLMODEL_NR_BODIES
Definition: metadata_label.h:631
MDL_CLASSIFICATION_DPR_05
Differential Phase Residual evaluated at FRC=0.5.
Definition: metadata_label.h:85
MDL_SHIFT_X_DIFF
difference in Shift along X axis (double)
Definition: metadata_label.h:434
RLN_OPTIMISER_FIX_SIGMA_NOISE
Definition: metadata_label.h:685
RLN_MLMODEL_NR_CLASSES
Definition: metadata_label.h:632
MDL_STAR_COMMENT
A comment for this object /*** NOTE THIS IS A SPECIAL CASE AND SO IS TREATED ***/.
Definition: metadata_label.h:453
MDL_CTF_BG_GAUSSIAN_SIGMAV
CTF Background parameter.
Definition: metadata_label.h:169
RLN_MLMODEL_HELICAL_RISE_MAX
Definition: metadata_label.h:624
RLN_IMAGE_STATS_SKEW
Definition: metadata_label.h:576
MDL_RANDOMSEED
Seed for random number generator.
Definition: metadata_label.h:375
MDL_NOISE_PARTICLE_COORD
Noise description for particle&#39;s center coordenates (when projecting)
Definition: metadata_label.h:320
RLN_OPTIMISER_NR_ITER_WO_HIDDEN_VAR_CHANGES
Definition: metadata_label.h:715
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