#include <metadata_row_vec.h>

Inheritance diagram for MDRowVec:

Collaboration diagram for MDRowVec:

Public Member Functions
	MDRowVec ()

	MDRowVec (std::vector< MDObject > &row, size_t rowi, std::array< int, MDL_LAST_LABEL > &label_to_col, std::vector< MDLabel > &col_to_label, size_t &no_columns)

	MDRowVec (const std::vector< MDObject > &row, size_t rowi, const std::array< int, MDL_LAST_LABEL > &label_to_col, const std::vector< MDLabel > &col_to_label, const size_t &no_columns)

	MDRowVec (const MDRowVec &)

MDRowVec &	operator= (const MDRowVec &)

MDRow &	operator= (const MDRow &row)

virtual	~MDRowVec ()

void	detach () override

bool	empty () const override

int	size () const override

void	clear () override

bool	inMetadata () const

bool	containsLabel (MDLabel label) const override

std::vector< MDLabel >	labels () const override

void	addLabel (MDLabel label) override

MDObject *	getObject (MDLabel label) override

const MDObject *	getObject (MDLabel label) const override

void	setValue (const MDObject &object) override

template<typename T >
T &	getValue (MDLabel label)

template<typename T >
const T &	getValue (MDLabel label) const

template<typename T >
bool	getValue (MDLabel label, T &d) const

template<typename T >
const T &	getValueOrDefault (MDLabel label, const T &def) const

template<typename T >
T &	getValueOrDefault (MDLabel label, const T &def)

template<typename T , typename T1 >
void	getValueOrDefault (MDLabel label, T &d, T1 def) const

template<typename T >
void	setValue (MDLabel label, const T &d, bool addLabel=true)

Public Member Functions inherited from MDRow
virtual	~MDRow ()=default

virtual size_t	id () const

virtual void	resetGeo (bool addLabels=true)

template<typename T >
T &	getValue (MDLabel label)

template<typename T >
const T &	getValue (MDLabel label) const

template<typename T >
bool	getValue (MDLabel label, T &d) const

bool	getValue (MDObject &object) const

template<typename T >
const T &	getValueOrDefault (MDLabel label, const T &def) const

template<typename T >
T &	getValueOrDefault (MDLabel label, const T &def)

template<typename T , typename T1 >
void	getValueOrDefault (MDLabel label, T &d, T1 def) const

template<typename T >
void	setValue (MDLabel label, const T &d, bool addLabel=true)

virtual void	setValueFromStr (MDLabel label, const String &value)

iterator	begin ()

iterator	end ()

const_iterator	begin () const

const_iterator	end () const

Static Public Member Functions
static MDRowVec	deepCopy (const MDRowVec &)

Friends
class	MetaDataVec

std::ostream &	operator<< (std::ostream &out, const MDRowVec &row)

Additional Inherited Members
Public Types inherited from MDRow
using	iterator = iterator_ptr< false >

using	const_iterator = iterator_ptr< true >

Detailed Description

Class for holding an entire row of MDObject in MetaDataVec. Row could be attached to OR detached from metadata

Detached row: holds its own _row & _label_to_col. When copied, content of these objects is copied, not just pointer.
Attached row: _row and _label_to_col points directly to Metadata object. When copied, just pointers are copied. Assumed to be read-only.

Notes

It's fast to create MDRowVec from MetaDataVec row, because only pointers are initialized. No data are copied.
Adding MDRowVec to MetaDataVec requires copying whole row.

Definition at line 46 of file metadata_row_vec.h.

Constructor & Destructor Documentation

◆ MDRowVec() [1/4]

MDRowVec::MDRowVec ( )

Definition at line 31 of file metadata_row_vec.cpp.

     : _col_to_label(nullptr), _no_columns(nullptr), _in_metadata(false) {
     _row = new std::vector<MDObject>();
     _label_to_col = new std::array<int, MDL_LAST_LABEL>();
     std::fill(_label_to_col->begin(), _label_to_col->end(), -1);
 }

◆ MDRowVec() [2/4]

MDRowVec::MDRowVec	(	std::vector< MDObject > &	row,
		size_t	rowi,
		std::array< int, MDL_LAST_LABEL > &	label_to_col,
		std::vector< MDLabel > &	col_to_label,
		size_t &	no_columns
	)

Definition at line 38 of file metadata_row_vec.cpp.

     : _row(&row), _rowi(rowi), _label_to_col(&label_to_col), _col_to_label(&col_to_label),
       _no_columns(&no_columns), _in_metadata(true)
     {}

◆ MDRowVec() [3/4]

MDRowVec::MDRowVec	(	const std::vector< MDObject > &	row,
		size_t	rowi,
		const std::array< int, MDL_LAST_LABEL > &	label_to_col,
		const std::vector< MDLabel > &	col_to_label,
		const size_t &	no_columns
	)

Definition at line 44 of file metadata_row_vec.cpp.

     : _row(const_cast<std::vector<MDObject>*>(&row)),
        _rowi(rowi),
        _label_to_col(const_cast<std::array<int, MDL_LAST_LABEL>*>(&label_to_col)),
        _col_to_label(const_cast<std::vector<MDLabel>*>(&col_to_label)),
        _no_columns(const_cast<size_t*>(&no_columns)),
        _in_metadata(true)
        // This is very nasty hack. I was unable to solve situation nicely.
        // Creator of the object must pay close attention to create 'const MDRowVec' when instantiating from
        // const MetaData. This should be ok as crator is only in MetaDataVec.
     {}

◆ MDRowVec() [4/4]

MDRowVec::MDRowVec ( const MDRowVec & other )

Definition at line 57 of file metadata_row_vec.cpp.

     : _rowi(other._rowi), _col_to_label(other._col_to_label), _no_columns(other._no_columns),
       _in_metadata(other._in_metadata)
     {
     if (_in_metadata) {
         _row = other._row;
         _label_to_col = other._label_to_col;
     } else {
         _row = new std::vector<MDObject>(*(other._row));
         _label_to_col = new std::array<int, MDL_LAST_LABEL>(*(other._label_to_col));
     }
 }

◆ ~MDRowVec()

MDRowVec::~MDRowVec ( )

virtual

Definition at line 118 of file metadata_row_vec.cpp.

                     {
     if (!_in_metadata) {
         delete _row;
         delete _label_to_col;
     }
 }

Member Function Documentation

◆ addLabel()

void MDRowVec::addLabel ( MDLabel label )

overridevirtual

Implements MDRow.

Definition at line 151 of file metadata_row_vec.cpp.

                                      {
     // Warning: not adding to all rows!
     if ((*_label_to_col)[label] < 0)
         newCol(label);
 }

◆ clear()

void MDRowVec::clear ( )

overridevirtual

Return number of labels present

Implements MDRow.

Definition at line 133 of file metadata_row_vec.cpp.

                      {
     _row->clear();
     if (!_in_metadata)
         std::fill(_label_to_col->begin(), _label_to_col->end(), -1);
 }

◆ containsLabel()

bool MDRowVec::containsLabel ( MDLabel label ) const

overridevirtual

Implements MDRow.

Definition at line 139 of file metadata_row_vec.cpp.

                                                 {
     return (*_label_to_col)[label] >= 0;
 }

◆ deepCopy()

MDRowVec MDRowVec::deepCopy ( const MDRowVec & row )

static

Definition at line 70 of file metadata_row_vec.cpp.

                                                {
     MDRowVec newRow(row);
     if (newRow._in_metadata)
         newRow.detach();
     return newRow;
 }

◆ detach()

void MDRowVec::detach ( )

overridevirtual

Reimplemented from MDRow.

Definition at line 77 of file metadata_row_vec.cpp.

                       {
     if (!this->_in_metadata)
         return;
 
     this->_in_metadata = false;
     this->_row = new std::vector<MDObject>(*(this->_row));
     this->_label_to_col = new std::array<int, MDL_LAST_LABEL>(*(this->_label_to_col));
     this->_col_to_label = nullptr;
     this->_no_columns = nullptr;
 }

◆ empty()

bool MDRowVec::empty ( ) const

overridevirtual

Implements MDRow.

Definition at line 125 of file metadata_row_vec.cpp.

                            {
     return _row->size() == 0;
 }

◆ getObject() [1/2]

MDObject * MDRowVec::getObject ( MDLabel label )

overridevirtual

Implements MDRow.

Definition at line 183 of file metadata_row_vec.cpp.

                                            {
     if ((*_label_to_col)[label] < 0)
         return nullptr;
     if ((*_label_to_col)[label] >= static_cast<int>(_row->size()))
         return nullptr;
     return &_row->at((*_label_to_col)[label]);
 }

◆ getObject() [2/2]

const MDObject * MDRowVec::getObject ( MDLabel label ) const

overridevirtual

Implements MDRow.

Definition at line 191 of file metadata_row_vec.cpp.

                                                        {
     if ((*_label_to_col)[label] < 0)
         return nullptr;
     if ((*_label_to_col)[label] >= static_cast<int>(_row->size()))
         return nullptr;
     return &_row->at((*_label_to_col)[label]);
 }

◆ getValue() [1/3]

template<typename T >

T& MDRowVec::getValue ( MDLabel label )

inline

Definition at line 93 of file metadata_row_vec.h.

93 { return MDRow::getValue<T>(label); }

◆ getValue() [2/3]

template<typename T >

const T& MDRowVec::getValue ( MDLabel label ) const

inline

Definition at line 96 of file metadata_row_vec.h.

96 { return MDRow::getValue<T>(label); }

◆ getValue() [3/3]

template<typename T >

bool MDRowVec::getValue	(	MDLabel	label,
		T &	d
	)		const

inline

Definition at line 99 of file metadata_row_vec.h.

                                              { // FIXME: deprecated
         return MDRow::getValue<T>(label, d);
     }

◆ getValueOrDefault() [1/3]

template<typename T >

const T& MDRowVec::getValueOrDefault	(	MDLabel	label,
		const T &	def
	)		const

inline

Definition at line 104 of file metadata_row_vec.h.

104 { return MDRow::getValueOrDefault<T>(label, def); }

◆ getValueOrDefault() [2/3]

template<typename T >

T& MDRowVec::getValueOrDefault	(	MDLabel	label,
		const T &	def
	)

inline

Definition at line 107 of file metadata_row_vec.h.

107 { return MDRow::getValueOrDefault<T>(label, def); }

◆ getValueOrDefault() [3/3]

template<typename T , typename T1 >

void MDRowVec::getValueOrDefault	(	MDLabel	label,
		T &	d,
		T1	def
	)		const

inline

Definition at line 110 of file metadata_row_vec.h.

                                                               { // FIXME: deprecated
         return MDRow::getValueOrDefault<T, T1>(label, d, def);
     }

◆ inMetadata()

bool MDRowVec::inMetadata ( ) const

Definition at line 231 of file metadata_row_vec.cpp.

231 { return _in_metadata; }

◆ labels()

std::vector< MDLabel > MDRowVec::labels ( ) const

overridevirtual

Implements MDRow.

Definition at line 143 of file metadata_row_vec.cpp.

                                           {
     std::vector<MDLabel> res;
     res.reserve(_row->size());
     for (const auto mdObj: *_row)
         res.emplace_back(mdObj.label);
     return res;
 }

◆ operator=() [1/2]

MDRowVec & MDRowVec::operator= ( const MDRowVec & other )

Definition at line 88 of file metadata_row_vec.cpp.

                                                      {
     if (this == &other)
         return *this;
 
     if (!_in_metadata) {
         delete _row;
         delete _label_to_col;
     }
 
     _rowi = other._rowi;
     _no_columns = other._no_columns;
     _in_metadata = other._in_metadata;
     _col_to_label = other._col_to_label;
 
     if (_in_metadata) {
         _row = other._row;
         _label_to_col = other._label_to_col;
     } else {
         _row = new std::vector<MDObject>(*(other._row));
         _label_to_col = new std::array<int, MDL_LAST_LABEL>(*(other._label_to_col));
     }
 
     return *this;
 }

◆ operator=() [2/2]

MDRow & MDRowVec::operator= ( const MDRow & row )

virtual

Implements MDRow.

Definition at line 113 of file metadata_row_vec.cpp.

                                              {
     *this = dynamic_cast<const MDRowVec&>(row);
     return *this;
 }

◆ setValue() [1/2]

void MDRowVec::setValue ( const MDObject & object )

overridevirtual

Implements MDRow.

Definition at line 199 of file metadata_row_vec.cpp.

                                               {
     MDLabel _label = object.label;
     int coli = (*_label_to_col)[_label];
     if (coli < 0) {
         size_t i = newCol(_label);
         (*_row)[i] = object;
     } else {
         while (_row->size() <= coli) {
             size_t j = _row->size();
             _row->emplace_back(MDObject((*_col_to_label)[j]));
         }
 
         (*_row)[(*_label_to_col)[_label]] = object;
     }
 }

◆ setValue() [2/2]

template<typename T >

void MDRowVec::setValue	(	MDLabel	label,
		const T &	d,
		bool	addLabel = `true`
	)

inline

Definition at line 115 of file metadata_row_vec.h.

115 { return MDRow::setValue<T>(label, d, addLabel); }

d

doublereal * d

Definition: numerical_recipes.cpp:2230

MDRowVec::addLabel

void addLabel(MDLabel label) override

Definition: metadata_row_vec.cpp:151

◆ size()

int MDRowVec::size ( ) const

overridevirtual

Implements MDRow.

Definition at line 129 of file metadata_row_vec.cpp.

                          {
     return _row->size();
 }

Friends And Related Function Documentation

◆ MetaDataVec

friend class MetaDataVec

friend

Definition at line 117 of file metadata_row_vec.h.

◆ operator<<

std::ostream& operator<<	(	std::ostream &	out,
		const MDRowVec &	row
	)

friend

Definition at line 223 of file metadata_row_vec.cpp.

                                                                {
     for (int i = 0; i < row.size(); ++i) {
         (*(row._row))[i].toStream(out);
         out << " ";
     }
     return out;
 }

The documentation for this class was generated from the following files:

xmippCore/core/metadata_row_vec.h
xmippCore/core/metadata_row_vec.cpp

Public Member Functions

Static Public Member Functions

Friends

Additional Inherited Members

Detailed Description

Notes

Constructor & Destructor Documentation

◆ MDRowVec() [1/4]

◆ MDRowVec() [2/4]

◆ MDRowVec() [3/4]

◆ MDRowVec() [4/4]

◆ ~MDRowVec()

Member Function Documentation

◆ addLabel()

◆ clear()

◆ containsLabel()

◆ deepCopy()

◆ detach()

◆ empty()

◆ getObject() [1/2]

◆ getObject() [2/2]

◆ getValue() [1/3]

◆ getValue() [2/3]

◆ getValue() [3/3]

◆ getValueOrDefault() [1/3]

◆ getValueOrDefault() [2/3]

◆ getValueOrDefault() [3/3]

◆ inMetadata()

◆ labels()

◆ operator=() [1/2]

◆ operator=() [2/2]

◆ setValue() [1/2]

◆ setValue() [2/2]

◆ size()

Friends And Related Function Documentation

◆ MetaDataVec

◆ operator<<