Stochastic Proximity Embedding

Collaboration diagram for Stochastic Proximity Embedding:

Classes
class	SPE

Functions
int	readSPE (size_t select_img, bool isStack=false)
int	writeSPE (size_t select_img, bool isStack=false, int mode=WRITE_OVERWRITE)
int	ImageBase::readSPE (size_t select_img, bool isStack=false)
int	ImageBase::writeSPE (size_t select_img, bool isStack=false, int mode=WRITE_OVERWRITE)

Detailed Description

Function Documentation

readSPE() [1/2]

int readSPE	(	size_t	select_img,
		bool	isStack = false
	)

SPE Reader

readSPE() [2/2]

int ImageBase::readSPE ( size_t  select_img, bool  isStack = false  )

protected

SPE Reader

Definition at line 38 of file rwSPE.cpp.

{

    int _xDim,_yDim,_zDim;
    size_t _nDim;

    short int aux;
    fseek(fimg,42,SEEK_SET);
    xmippFREAD(&aux, sizeof(short int), 1, fimg, swap );
    _xDim = aux;
    fseek(fimg,656,SEEK_SET);
    xmippFREAD(&aux, sizeof(short int), 1, fimg, swap );
    _yDim = aux;

    _zDim = 1;
    _nDim = 1;

    // Map the parameters
    setDimensions(_xDim, _yDim, _zDim, _nDim);

    offset = 4100;
    DataType datatype = DT_UShort;

    MDMainHeader.setValue(MDL_SAMPLINGRATE_X,(double) -1);
    MDMainHeader.setValue(MDL_SAMPLINGRATE_Y,(double) -1);
    MDMainHeader.setValue(MDL_DATATYPE,(int)datatype);

    if (dataMode==HEADER) // Stop reading if not necessary
        return 0;

    size_t   imgStart = IMG_INDEX(select_img);
    size_t   imgEnd = (select_img != ALL_IMAGES) ? imgStart + 1 : _nDim;

    MD.clear();
    for (size_t i = 0; i < imgEnd-imgStart; i++)
        MD.push_back(std::unique_ptr<MDRowVec>(new MDRowVec(MDL::emptyHeaderVec())));
    if( dataMode < DATA )
        return 0;

    size_t pad = 0;

    readData(fimg, select_img, datatype, pad);

    return(0);
}

writeSPE() [1/2]

int writeSPE	(	size_t	select_img,
		bool	isStack = false,
		int	mode = WRITE_OVERWRITE
	)

SPE Writer

writeSPE() [2/2]

int ImageBase::writeSPE ( size_t  select_img, bool  isStack = false, int  mode = WRITE_OVERWRITE  )

protected

SPE Writer

Definition at line 84 of file rwSPE.cpp.

{
    REPORT_ERROR(ERR_IMG_NOWRITE, "writeSPE is not implemented.");
}