metadata_base.h File Reference

#include <cstddef>
#include <map>
#include <cmath>
#include <memory>
#include <iostream>
#include "xmipp_error.h"
#include "xmipp_filename.h"
#include "metadata_label.h"
#include "metadata_writemode.h"
#include "metadata_base_it.h"
#include "metadata_static.h"
#include "metadata_query.h"
#include "choose.h"

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Classes
struct	mdBuffer
struct	mdBlock
class	ObjectDoesNotExist
class	NotImplemented
class	ColumnDoesNotExist
class	MetaData
struct	MetaData::rowIterator< IsConst >
struct	MetaData::idIterator< IsConst >
struct	MetaData::IdIteratorProxy< IsConst >

Macros
#define	BAD_OBJID   0
#define	BAD_INDEX   -1
#define	FILENAME_XMIPP_STAR   "# XMIPP_STAR_1"
#define	FILENAME_XMIPP_SQLITE   "SQLite format 3"
#define	DEFAULT_BLOCK_NAME   "noname"
#define	FOR_ALL_OBJECTS_IN_METADATA(__md)   for (size_t objId : __md.ids())
#define	FOR_ALL_ROWS_IN_METADATA(__md)   for (auto& row : __md)
#define	END_OF_LINE()   ((char*) memchr (iter, '\n', end-iter))
#define	BUFFER_CREATE(b)   mdBuffer b; b.begin = nullptr; b.size = 0
	Some macros to use the buffer. More...
#define	BUFFER_COPY(b1, b2)   mdBuffer b2; b2.begin = b1.begin; b2.size = b1.size
#define	BUFFER_MOVE(b, n)   b.begin += n; b.size -= n
#define	BUFFER_FIND(b, str, n)   (char*) _memmem(b.begin, b.size, str, n)
#define	BLOCK_CREATE(b)   mdBlock b; b.begin = b.end = b.loop = nullptr; b.nameSize = 0
	Some macros to use the block pointers. More...
#define	BLOCK_INIT(b)   b.begin = b.end = b.loop = nullptr; b.nameSize = 0
#define	BLOCK_NAME(b, s)   s.assign(b.begin, b.nameSize)
#define	line_max   70
	comment is wraped in char_max length lines More...

Functions
void	getBlocksInMetaDataFile (const FileName &inFile, StringVector &blockList)
bool	existsBlockInMetaDataFile (const FileName &inFile, const String &inBlock)
bool	existsBlockInMetaDataFile (const FileName &inFileWithBlock)
std::ostream &	operator<< (std::ostream &o, const MetaData &mD)
WriteModeMetaData	metadataModeConvert (String mode)
bool	vectorContainsLabel (const std::vector< MDLabel > &labelsVector, const MDLabel label)

Macro Definition Documentation

line_max

#define line_max   70

comment is wraped in char_max length lines

Definition at line 187 of file metadata_base.h.

Function Documentation

metadataModeConvert()

WriteModeMetaData metadataModeConvert

(

String

mode

)

Convert string to write mode metadata enum.

Definition at line 128 of file metadata_base.cpp.

                                                   {
    toLower(mode);
    if (mode.npos != mode.find("overwrite"))
        return MD_OVERWRITE;
    if (mode.npos != mode.find("append"))
        return MD_APPEND;
    REPORT_ERROR(ERR_ARG_INCORRECT,"metadataModeConvert: Invalid mode: "+mode);
}

vectorContainsLabel()

bool vectorContainsLabel	(	const std::vector< MDLabel > &	labelsVector,
		const MDLabel	label
	)

Definition at line 137 of file metadata_base.cpp.

                                                                                      {
    std::vector<MDLabel>::const_iterator location;
    location = std::find(labelsVector.begin(), labelsVector.end(), label);
    return (location != labelsVector.end());
}