micrograph.cpp File Reference

#include "micrograph.h"
#include <core/args.h>
#include <data/mask.h>
#include <core/geometry.h>
#include <fstream>
#include <stdio.h>
#include <sys/types.h>
#include <sys/stat.h>
#include <errno.h>
#include <fcntl.h>

Include dependency graph for micrograph.cpp:

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Functions
double	matrix_fitness (double *p, void *prm)

Function Documentation

matrix_fitness()

double matrix_fitness	(	double *	p,
		void *	prm
	)

Definition at line 790 of file micrograph.cpp.

{
    auto *aligner = (TiltPairAligner *) prm;
    Euler_angles2matrix(-p[1], p[3], p[2], aligner->pair_E);
    double retval = 0;
    for (int i = 0; i < 2; i++)
        for (int j = 0; j < 2; j++)
        {
            double error = fabs(
                               MAT_ELEM(aligner->pair_E,i, j)
                               - MAT_ELEM(aligner->Put, i, j));
            retval += error * error;
        }
    return retval;
}