#include <core/multidim_array.h>
#include <core/matrix2d.h>
#include <core/histogram.h>
#include <core/xmipp_fftw.h>

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Enumerations
enum	FP_TYPE { SIMPLY_OPEN_FRINGES, SIMPLY_CLOSED_FRINGES, COMPLEX_OPEN_FRINGES, COMPLEX_CLOSED_FRINGES, SIMPLY_CLOSED_FRINGES_MOD }

Functions
void	simulPattern (MultidimArray< double > &im, enum FP_TYPE type, int xdim, int ydim, double noiseLevel, const double freq, Matrix1D< int > coefs)
	Function to simulate some test fringe patterns. More...

void	SPTH (FourierTransformer &ftrans, MultidimArray< double > &im, MultidimArray< std::complex< double > > &imProc)

void	orMinDer (const MultidimArray< double > &im, MultidimArray< double > &orMap, MultidimArray< double > &orModMap, int wSize, MultidimArray< bool > &ROI)

void	normalize (FourierTransformer &ftrans, MultidimArray< double > &im, MultidimArray< double > &imN, MultidimArray< double > &imModMap, double R, double S, MultidimArray< bool > &ROI)

void	normalizeWB (MultidimArray< double > &im, MultidimArray< double > &imN, MultidimArray< double > &imModMap, double rmax, double rmin, MultidimArray< bool > &ROI)

void	normalizeWB2 (MultidimArray< double > &im, MultidimArray< double > &imN, MultidimArray< double > &imModMap, double rmax, double rmin, MultidimArray< bool > &ROI)

void	direction (const MultidimArray< double > &orMap, MultidimArray< double > &qualityMap, double lambda, int size, MultidimArray< double > &dirMap, int x, int y)

void	unwrapping (const MultidimArray< double > &wrappedPhase, MultidimArray< double > &qualityMap, double lambda, int size, MultidimArray< double > &unwrappedPhase)

void	demodulate (MultidimArray< double > &im, double lambda, int size, int x, int y, int rmin, int rmax, MultidimArray< double > &phase, MultidimArray< double > &mod, Matrix1D< double > &coeffs, int verbose=0)

void	demodulate2 (MultidimArray< double > &im, double lambda, int size, int rmin, int rmax, Matrix1D< double > &coeffs, int verbose=0)

void	firsPSDZero (MultidimArray< double > &enhancedPSD, Matrix1D< double > &xPoints, Matrix1D< double > &yPoints, double rmin, double rmax, int numAngles, int verbose=0)

void	fitEllipse (Matrix1D< double > &xPts, Matrix1D< double > &yPts, double &x0, double &y0, double &majorAxis, double &minorAxis, double &ellipseAngle)

void	fitEllipse (MultidimArray< double > &normImag, double &x0, double &y0, double &majorAxis, double &minorAxis, double &ellipseAngle, size_t &area)

void	calculateDefocus (double &defocusU, double &defocusV, double majorAxis, double minorAxis, double Q0, double lambda, double Cs, double imgSize, double Ts)

Enumerations

Functions