Xmipp  v3.23.11-Nereus
programs Directory Reference
Directory dependency graph for programs:
xmipp/applications/programs

Directories

directory  angular_accuracy_pca
 
directory  angular_assignment_mag
 
directory  angular_break_symmetry
 
directory  angular_commonline
 
directory  angular_continuous_assign
 
directory  angular_continuous_assign2
 
directory  angular_discrete_assign
 
directory  angular_distance
 
directory  angular_distribution_show
 
directory  angular_estimate_tilt_axis
 
directory  angular_neighbourhood
 
directory  angular_project_library
 
directory  angular_projection_matching
 
directory  angular_resolution_alignment
 
directory  angular_rotate
 
directory  angular_sph_alignment
 
directory  art_zernike3d
 
directory  classify_analyze_cluster
 
directory  classify_compare_classes
 
directory  classify_evaluate_classes
 
directory  classify_extract_features
 
directory  classify_first_split
 
directory  classify_first_split3
 
directory  classify_kerdensom
 
directory  compare_density
 
directory  compare_views
 
directory  coordinates_noisy_zones_filter
 
directory  ctf_correct_phase
 
directory  ctf_correct_wiener2d
 
directory  ctf_correct_wiener3d
 
directory  ctf_enhance_psd
 
directory  ctf_estimate_from_micrograph
 
directory  ctf_estimate_from_psd
 
directory  ctf_estimate_from_psd_fast
 
directory  ctf_group
 
directory  ctf_phase_flip
 
directory  ctf_sort_psds
 
directory  cuda_align_significant
 
directory  cuda_angular_sph_alignment
 
directory  cuda_movie_alignment_correlation
 
directory  cuda_reconstruct_fourier
 
directory  cuda_volume_deform_sph
 
directory  cuda_volume_halves_restoration
 
directory  flexible_alignment
 
directory  forward_art_zernike3d
 
directory  forward_art_zernike3d_subtomos
 
directory  forward_zernike_images
 
directory  forward_zernike_images_priors
 
directory  forward_zernike_subtomos
 
directory  forward_zernike_volume
 
directory  image_align
 
directory  image_align_tilt_pairs
 
directory  image_assignment_tilt_pair
 
directory  image_convert
 
directory  image_eliminate_byEnergy
 
directory  image_eliminate_empty_particles
 
directory  image_find_center
 
directory  image_header
 
directory  image_histogram
 
directory  image_odd_even
 
directory  image_operate
 
directory  image_peak_high_contrast
 
directory  image_residuals
 
directory  image_resize
 
directory  image_rotational_pca
 
directory  image_sort_by_statistics
 
directory  image_ssnr
 
directory  image_statistics
 
directory  image_vectorize
 
directory  local_volume_adjust
 
directory  matrix_dimred
 
directory  metadata_histogram
 
directory  metadata_import
 
directory  metadata_split
 
directory  metadata_split_3D
 
directory  metadata_utilities
 
directory  metadata_xml
 
directory  micrograph_automatic_picking
 
directory  micrograph_scissor
 
directory  ml_align2d
 
directory  mlf_align2d
 
directory  movie_alignment_correlation
 
directory  movie_estimate_gain
 
directory  movie_filter_dose
 
directory  movie_optical_alignment_cpu
 
directory  movie_optical_alignment_gpu
 
directory  mpi_angular_accuracy_pca
 
directory  mpi_angular_assignment_mag
 
directory  mpi_angular_class_average
 
directory  mpi_angular_continuous_assign
 
directory  mpi_angular_continuous_assign2
 
directory  mpi_angular_discrete_assign
 
directory  mpi_angular_project_library
 
directory  mpi_angular_projection_matching
 
directory  mpi_angular_sph_alignment
 
directory  mpi_classify_CL2D
 
directory  mpi_classify_CL2D_core_analysis
 
directory  mpi_classify_CLTomo_prog
 
directory  mpi_classify_FTTRI
 
directory  mpi_ctf_correct_phase
 
directory  mpi_ctf_correct_wiener2d
 
directory  mpi_ctf_sort_psds
 
directory  mpi_cuda_reconstruct_fourier
 
directory  mpi_forward_zernike_images
 
directory  mpi_forward_zernike_images_priors
 
directory  mpi_forward_zernike_subtomos
 
directory  mpi_image_eliminate_byEnergy
 
directory  mpi_image_operate
 
directory  mpi_image_resize
 
directory  mpi_image_rotational_pca
 
directory  mpi_image_sort
 
directory  mpi_image_ssnr
 
directory  mpi_ml_align2d
 
directory  mpi_mlf_align2d
 
directory  mpi_multireference_aligneability
 
directory  mpi_nma_alignment
 
directory  mpi_nma_alignment_vol
 
directory  mpi_performance_test
 
directory  mpi_reconstruct_art
 
directory  mpi_reconstruct_fourier
 
directory  mpi_reconstruct_fourier_accel
 
directory  mpi_reconstruct_significant
 
directory  mpi_reconstruct_wbp
 
directory  mpi_run
 
directory  mpi_starpu_reconstruct_fourier
 
directory  mpi_subtomo_subtraction
 
directory  mpi_subtract_projection
 
directory  mpi_transform_adjust_image_grey_levels
 
directory  mpi_transform_filter
 
directory  mpi_transform_geometry
 
directory  mpi_transform_mask
 
directory  mpi_transform_normalize
 
directory  mpi_transform_symmetrize
 
directory  mpi_transform_threshold
 
directory  mpi_validation_nontilt
 
directory  mpi_volume_homogenizer
 
directory  mpi_volumeset_align
 
directory  mpi_write_test
 
directory  multireference_aligneability
 
directory  nma_alignment
 
directory  nma_alignment_vol
 
directory  parallel_forward_art_zernike3d
 
directory  pdb_analysis
 
directory  pdb_label_from_volume
 
directory  pdb_nma_deform
 
directory  pdb_reduce_pseudoatoms
 
directory  pdb_sph_deform
 
directory  phantom_create
 
directory  phantom_movie
 
directory  phantom_project
 
directory  phantom_simulate_microscope
 
directory  phantom_transform
 
directory  psd_estimate
 
directory  reconstruct_art
 
directory  reconstruct_fourier
 
directory  reconstruct_fourier_accel
 
directory  reconstruct_significant
 
directory  reconstruct_wbp
 
directory  resolution_directional
 
directory  resolution_fsc
 
directory  resolution_fso
 
directory  resolution_localfilter
 
directory  resolution_monogenic_signal
 
directory  resolution_monotomo
 
directory  resolution_pdb_bfactor
 
directory  subtomo_subtraction
 
directory  subtract_projection
 
directory  tomo_detect_missing_wedge
 
directory  tomo_extract_particlestacks
 
directory  tomo_extract_subtomograms
 
directory  tomo_filter_coordinates
 
directory  tomo_map_back
 
directory  tomo_project
 
directory  tomo_simulate_tilt_series
 
directory  tomo_tiltseries_dose_filter
 
directory  transform_add_noise
 
directory  transform_adjust_image_grey_levels
 
directory  transform_adjust_volume_grey_levels
 
directory  transform_center_image
 
directory  transform_dimred
 
directory  transform_downsample
 
directory  transform_filter
 
directory  transform_geometry
 
directory  transform_mask
 
directory  transform_mirror
 
directory  transform_morphology
 
directory  transform_normalize
 
directory  transform_randomize_phases
 
directory  transform_symmetrize
 
directory  transform_threshold
 
directory  transform_window
 
directory  validation_nontilt
 
directory  version
 
directory  volume_align
 
directory  volume_apply_coefficient_zernike3d
 
directory  volume_apply_deform_sph
 
directory  volume_center
 
directory  volume_correct_bfactor
 
directory  volume_deform_sph
 
directory  volume_find_symmetry
 
directory  volume_from_pdb
 
directory  volume_halves_restoration
 
directory  volume_initial_simulated_annealing
 
directory  volume_local_sharpening
 
directory  volume_segment
 
directory  volume_structure_factor
 
directory  volume_subtraction
 
directory  volume_to_pseudoatoms
 
directory  volume_to_web
 
directory  volumeset_align