Collaboration diagram for Symmetry handling:

Classes
class	SymList

Macros
#define	sym_undefined -1

#define	sym_P1 1

#define	sym_P2 3

#define	sym_P2_1 4

#define	sym_C2 12

#define	sym_P222 16

#define	sym_P2_122 17

#define	sym_P22_12 1717

#define	sym_P22_12_1 18

#define	sym_P4 75

#define	sym_P422 89

#define	sym_P42_12 90

#define	sym_P3 143

#define	sym_P312 150

#define	sym_P6 168

#define	sym_P622 177

#define	SYM_ACCURACY 1e-6

#define	pg_CI 200

#define	pg_CS 201

#define	pg_CN 202

#define	pg_CNV 203

#define	pg_CNH 204

#define	pg_SN 205

#define	pg_DN 206

#define	pg_DNV 207

#define	pg_DNH 208

#define	pg_T 209

#define	pg_TD 210

#define	pg_TH 211

#define	pg_O 212

#define	pg_OH 213

#define	pg_I 214

#define	pg_IH 215

#define	pg_I1 216

#define	pg_I2 217

#define	pg_I3 218

#define	pg_I4 219

#define	pg_I5 220

#define	pg_I1H 221

#define	pg_I2H 222

#define	pg_I3H 223

#define	pg_I4H 224

#define	pg_I5H 225

#define	SYMINDEX(SL, sym_no, i, numIMG) numIMG+SL.__L.mdimy/4*i+sym_no

Detailed Description

The symmetry lists are, simply, lists of 2D matrices. It's the way of taking symmetry into account in the reconstruction programs. The symmetry list must contain matrices which express equivalent views to the actual one due to the underlying volume symmetry. The identity matrix is not within the list. You know that symmetry matrices should form a subgroup, when reading a file the subgroup is automatically computed and, when you add or remove a new matrix, the subgroup must be manually computed.

Macro Definition Documentation

◆ pg_CI

#define pg_CI 200

Definition at line 74 of file symmetries.h.

◆ pg_CN

#define pg_CN 202

Definition at line 76 of file symmetries.h.

◆ pg_CNH

#define pg_CNH 204

Definition at line 78 of file symmetries.h.

◆ pg_CNV

#define pg_CNV 203

Definition at line 77 of file symmetries.h.

◆ pg_CS

#define pg_CS 201

Definition at line 75 of file symmetries.h.

◆ pg_DN

#define pg_DN 206

Definition at line 80 of file symmetries.h.

◆ pg_DNH

#define pg_DNH 208

Definition at line 82 of file symmetries.h.

◆ pg_DNV

#define pg_DNV 207

Definition at line 81 of file symmetries.h.

◆ pg_I

#define pg_I 214

Definition at line 88 of file symmetries.h.

◆ pg_I1

#define pg_I1 216

Definition at line 91 of file symmetries.h.

◆ pg_I1H

#define pg_I1H 221

Definition at line 97 of file symmetries.h.

◆ pg_I2

#define pg_I2 217

Definition at line 92 of file symmetries.h.

◆ pg_I2H

#define pg_I2H 222

Definition at line 98 of file symmetries.h.

◆ pg_I3

#define pg_I3 218

Definition at line 93 of file symmetries.h.

◆ pg_I3H

#define pg_I3H 223

Definition at line 99 of file symmetries.h.

◆ pg_I4

#define pg_I4 219

Definition at line 94 of file symmetries.h.

◆ pg_I4H

#define pg_I4H 224

Definition at line 100 of file symmetries.h.

◆ pg_I5

#define pg_I5 220

Definition at line 95 of file symmetries.h.

◆ pg_I5H

#define pg_I5H 225

Definition at line 101 of file symmetries.h.

◆ pg_IH

#define pg_IH 215

Definition at line 89 of file symmetries.h.

◆ pg_O

#define pg_O 212

Definition at line 86 of file symmetries.h.

◆ pg_OH

#define pg_OH 213

Definition at line 87 of file symmetries.h.

◆ pg_SN

#define pg_SN 205

Definition at line 79 of file symmetries.h.

◆ pg_T

#define pg_T 209

Definition at line 83 of file symmetries.h.

◆ pg_TD

#define pg_TD 210

Definition at line 84 of file symmetries.h.

◆ pg_TH

#define pg_TH 211

Definition at line 85 of file symmetries.h.

◆ SYM_ACCURACY

#define SYM_ACCURACY 1e-6

Definition at line 72 of file symmetries.h.

◆ sym_C2

#define sym_C2 12

Definition at line 57 of file symmetries.h.

◆ sym_P1

#define sym_P1 1

Definition at line 54 of file symmetries.h.

◆ sym_P2

#define sym_P2 3

Definition at line 55 of file symmetries.h.

◆ sym_P222

#define sym_P222 16

Definition at line 58 of file symmetries.h.

◆ sym_P22_12

#define sym_P22_12 1717

Definition at line 60 of file symmetries.h.

◆ sym_P22_12_1

#define sym_P22_12_1 18

Definition at line 62 of file symmetries.h.

◆ sym_P2_1

#define sym_P2_1 4

Definition at line 56 of file symmetries.h.

◆ sym_P2_122

#define sym_P2_122 17

Definition at line 59 of file symmetries.h.

◆ sym_P3

#define sym_P3 143

Definition at line 66 of file symmetries.h.

◆ sym_P312

#define sym_P312 150

Definition at line 67 of file symmetries.h.

◆ sym_P4

#define sym_P4 75

Definition at line 63 of file symmetries.h.

◆ sym_P422

#define sym_P422 89

Definition at line 64 of file symmetries.h.

◆ sym_P42_12

#define sym_P42_12 90

Definition at line 65 of file symmetries.h.

◆ sym_P6

#define sym_P6 168

Definition at line 68 of file symmetries.h.

◆ sym_P622

#define sym_P622 177

Definition at line 69 of file symmetries.h.

◆ sym_undefined

#define sym_undefined -1

Definition at line 53 of file symmetries.h.

◆ SYMINDEX

#define SYMINDEX	(	SL,
		sym_no,
		i,
		numIMG
	)	numIMG+SL.__L.mdimy/4*i+sym_no

Number of an image in the reconstruction list. This macro returns the index of a symmetry image (after the symmetry matrix number sym_no) within a list where the first images are true images and the last ones, the symmetrized copies (all copies of a same image are together). The total number of real images is numIMG, and i is the index within this first numIMG images of the image we want to symmetrize The first image in the list is the number 0

Definition at line 110 of file symmetries.h.

Classes

Macros