ProgPDBDictionary Member List

This is the complete list of members for ProgPDBDictionary, including all inherited members.

addExampleLine(const char *example, bool verbatim=true)	XmippProgram
addKeywords(const char *keywords)	XmippProgram
addParamsLine(const String &line)	XmippProgram
addParamsLine(const char *line)	XmippProgram
addSeeAlsoLine(const char *seeAlso)	XmippProgram
addUsageLine(const char *line, bool verbatim=false)	XmippProgram
angleThreshold	ProgPDBDictionary
approximatePatch(const MultidimArray< double > &lowResolutionPatch, std::vector< size_t > &selectedPatchesIdx, std::vector< double > &weight, Matrix1D< double > &alpha)	ProgPDBDictionary
argc	XmippProgram	protected
argv	XmippProgram	protected
auxPatch	ProgPDBDictionary
auxSignature	ProgPDBDictionary
canonicalOrientation2D(const MultidimArray< double > &patch, MultidimArray< double > &canonicalPatch, Matrix1D< double > &patchSignature)	ProgPDBDictionary
canonicalOrientation3D(const MultidimArray< double > &patch, MultidimArray< double > &canonicalPatch, Matrix1D< double > &patchSignature)	ProgPDBDictionary
checkParam(const char *param)	XmippProgram
clearUsage()	XmippProgram
constructRotationGroup()	ProgPDBDictionary
constructRotationGroup2D()	ProgPDBDictionary
constructRotationGroup3D()	ProgPDBDictionary
debug	XmippProgram
defaultComments	XmippProgram	protected
defineCommons()	XmippProgram	protected
defineParams()	ProgPDBDictionary	virtual
dictionaryHigh	ProgPDBDictionary
dictionaryLow	ProgPDBDictionary
dictionarySignature	ProgPDBDictionary
doRun	XmippProgram
endProgress()	XmippProgram
errorCode	XmippProgram	protected
existsParam(const char *param)	XmippProgram
extractPatch(const MultidimArray< double > &V, MultidimArray< double > &patch, int k, int i, int j)	ProgPDBDictionary
fnRoot	ProgPDBDictionary
getCountParam(const char *param)	XmippProgram
getDoubleParam(const char *param, int arg=0)	XmippProgram
getDoubleParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getFloatParam(const char *param, int arg=0)	XmippProgram
getFloatParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getIntParam(const char *param, int arg=0)	XmippProgram
getIntParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getListParam(const char *param, StringVector &list)	XmippProgram
getParam(const char *param, int arg=0)	XmippProgram
getParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getParamDef(const char *param) const	XmippProgram
initComments()	XmippProgram	virtual
initProgress(size_t total, size_t stepBin=60)	XmippProgram
insertPatch(MultidimArray< double > &Vhigh, MultidimArray< double > &weightHigh, const MultidimArray< double > &patchHigh, int k, int i, int j, double R2)	ProgPDBDictionary
iterations	ProgPDBDictionary
lambda	ProgPDBDictionary
loadDictionaries()	ProgPDBDictionary
mode	ProgPDBDictionary
name() const	XmippProgram
notInDictionary(const MultidimArray< double > &candidatePatch, MultidimArray< double > &canonicalPatch, Matrix1D< double > &canonicalSignature, size_t &canonicalIdx)	ProgPDBDictionary
patchSize	ProgPDBDictionary
patchSize_2	ProgPDBDictionary
processDefaultComment(const char *param, const char *left)	XmippProgram
progDef	XmippProgram	protected
quit(int exit_code=0) const	XmippProgram	virtual
read(int argc, const char **argv, bool reportErrors=true)	XmippProgram	virtual
read(int argc, char **argv, bool reportErrors=true)	XmippProgram	virtual
read(const String &argumentsLine)	XmippProgram
readParams()	ProgPDBDictionary	virtual
reconstructPatch(size_t idxTransf, std::vector< size_t > &selectedPatchesIdx, Matrix1D< double > &alpha, MultidimArray< double > &highResolutionPatch)	ProgPDBDictionary
rotationGroup	ProgPDBDictionary
run()=0	ProgPDBDictionary	pure virtual
runWithoutArgs	XmippProgram
saveDictionaries() const	ProgPDBDictionary
selectDictionaryPatches(const MultidimArray< double > &lowResolutionPatch, Matrix1D< double > &lowResolutionPatchSignature, std::vector< size_t > &selectedPatchesIdx, std::vector< double > &weight)	ProgPDBDictionary
setDefaultComment(const char *param, const char *comment)	XmippProgram
setProgramName(const char *name)	XmippProgram
setProgress(size_t value=0)	XmippProgram
show()	ProgPDBDictionary	virtual
XmippProgram::show() const	XmippProgram	virtual
stdThreshold	ProgPDBDictionary
tryRun()	XmippProgram	virtual
Ui	ProgPDBDictionary
UitUi	ProgPDBDictionary
Uity	ProgPDBDictionary
usage(int verb=0) const	XmippProgram	virtual
usage(const String &param, int verb=2)	XmippProgram	virtual
v1	ProgPDBDictionary
v2	ProgPDBDictionary
verbose	XmippProgram
version() const	XmippProgram
wi	ProgPDBDictionary
XmippProgram()	XmippProgram
XmippProgram(int argc, const char **argv)	XmippProgram
y	ProgPDBDictionary
yp	ProgPDBDictionary
~XmippProgram()	XmippProgram	virtual