ProgMonoTomo Member List

This is the complete list of members for ProgMonoTomo, including all inherited members.

addExampleLine(const char *example, bool verbatim=true)	XmippProgram
addKeywords(const char *keywords)	XmippProgram
addParamsLine(const String &line)	XmippProgram
addParamsLine(const char *line)	XmippProgram
addSeeAlsoLine(const char *seeAlso)	XmippProgram
addUsageLine(const char *line, bool verbatim=false)	XmippProgram
amplitudeMonogenicSignal3D(MultidimArray< std::complex< double > > &myfftV, double freq, double freqH, double freqL, MultidimArray< double > &amplitude, int count, FileName fnDebug)	ProgMonoTomo
amplitudeMonogenicSignal3D(const std::vector< std::complex< float >> &myfftV, float freq, float freqH, float freqL, MultidimArray< float > &amplitude, int count, FileName fnDebug)	ProgMonoTomo
argc	XmippProgram	protected
argv	XmippProgram	protected
automaticMode	ProgMonoTomo
backward_transformer	ProgMonoTomo
checkParam(const char *param)	XmippProgram
clearUsage()	XmippProgram
debug	XmippProgram
defaultComments	XmippProgram	protected
defineCommons()	XmippProgram	protected
defineParams()	ProgMonoTomo	virtual
defineParams()	ProgMonoTomo	virtual
doRun	XmippProgram
endProgress()	XmippProgram
errorCode	XmippProgram	protected
existsParam(const char *param)	XmippProgram
fftN	ProgMonoTomo
fftV	ProgMonoTomo
fftVRiesz	ProgMonoTomo
fftVRiesz	ProgMonoTomo
fftVRiesz_aux	ProgMonoTomo
fftVRiesz_aux	ProgMonoTomo
FilterBand	ProgMonoTomo
firstMonoResEstimation(MultidimArray< std::complex< double > > &myfftV, double freq, double freqH, double freqL, MultidimArray< double > &amplitude, int count, FileName fnDebug, double &mean_Signal, double &mean_noise, double &thresholdFirstEstimation)	ProgMonoTomo
firstMonoResEstimation(MultidimArray< std::complex< double > > &myfftV, double freq, double freqH, double freqL, MultidimArray< double > &amplitude, int count, FileName fnDebug, double &mean_Signal, double &mean_noise, double &thresholdFirstEstimation)	ProgMonoTomo
fnchim	ProgMonoTomo
fnFilt	ProgMonoTomo
fnMask	ProgMonoTomo
fnMaskOut	ProgMonoTomo
fnmaskWedge	ProgMonoTomo
fnMd	ProgMonoTomo
fnMeanVol	ProgMonoTomo
fnOut	ProgMonoTomo
fnSpatial	ProgMonoTomo
fnVol	ProgMonoTomo
fnVol2	ProgMonoTomo
forward_transformer	ProgMonoTomo
fourierNoise	ProgMonoTomo
fourierSignal	ProgMonoTomo
freq_fourier_x	ProgMonoTomo
freq_fourier_y	ProgMonoTomo
freq_fourier_z	ProgMonoTomo
freq_step	ProgMonoTomo
gaussFilter(const MultidimArray< float > &vol, const float, MultidimArray< float > &VRiesz)	ProgMonoTomo
getCountParam(const char *param)	XmippProgram
getDoubleParam(const char *param, int arg=0)	XmippProgram
getDoubleParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getFilteringResolution(size_t idx, float freq, float lastResolution, float freqL, float &resolution)	ProgMonoTomo
getFloatParam(const char *param, int arg=0)	XmippProgram
getFloatParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getIntParam(const char *param, int arg=0)	XmippProgram
getIntParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getListParam(const char *param, StringVector &list)	XmippProgram
getParam(const char *param, int arg=0)	XmippProgram
getParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getParamDef(const char *param) const	XmippProgram
halfMapsGiven	ProgMonoTomo
initComments()	XmippProgram	virtual
initProgress(size_t total, size_t stepBin=60)	XmippProgram
iu	ProgMonoTomo
localNoise(MultidimArray< double > &noiseMap, Matrix2D< double > &noiseMatrix, int boxsize, Matrix2D< double > &thresholdMatrix)	ProgMonoTomo
localNoise(MultidimArray< float > &noiseMap, Matrix2D< double > &noiseMatrix, int boxsize, Matrix2D< double > &thresholdMatrix)	ProgMonoTomo
lowestResolutionbyPercentile(MultidimArray< double > &resolutionVol, std::vector< double > &list, double &cut_value, double &resolutionThreshold)	ProgMonoTomo
lowestResolutionbyPercentile(MultidimArray< float > &resolutionVol, std::vector< float > &list, float &cut_value, float &resolutionThreshold)	ProgMonoTomo
lowPassFilter	ProgMonoTomo
mask	ProgMonoTomo
maskMatrix	ProgMonoTomo
maxRes	ProgMonoTomo
median3x3x3(MultidimArray< double > vol, MultidimArray< double > &filtered)	ProgMonoTomo
median3x3x3(MultidimArray< double > vol, MultidimArray< double > &filtered)	ProgMonoTomo
minRes	ProgMonoTomo
name() const	XmippProgram
noiseOnlyInHalves	ProgMonoTomo
nthrs	ProgMonoTomo
Nvoxels	ProgMonoTomo
NVoxelsOriginalMask	ProgMonoTomo
postProcessingLocalResolutions(MultidimArray< double > &resolutionVol, std::vector< double > &list)	ProgMonoTomo
postProcessingLocalResolutions(MultidimArray< float > &resolutionVol, std::vector< float > &list)	ProgMonoTomo
processDefaultComment(const char *param, const char *left)	XmippProgram
produceSideInfo()	ProgMonoTomo
produceSideInfo()	ProgMonoTomo
progDef	XmippProgram	protected
quit(int exit_code=0) const	XmippProgram	virtual
R	ProgMonoTomo
read(int argc, const char **argv, bool reportErrors=true)	XmippProgram	virtual
read(int argc, char **argv, bool reportErrors=true)	XmippProgram	virtual
read(const String &argumentsLine)	XmippProgram
readParams()	ProgMonoTomo	virtual
readParams()	ProgMonoTomo	virtual
resolution2eval(int &count_res, double step, double &resolution, double &last_resolution, double &freq, double &freqL, int &last_fourier_idx, bool &continueIter, bool &breakIter)	ProgMonoTomo
resolution2eval(int &count_res, double step, double &resolution, double &last_resolution, double &freq, double &freqL, int &last_fourier_idx, bool &continueIter, bool &breakIter)	ProgMonoTomo
resolutionMatrix	ProgMonoTomo
resStep	ProgMonoTomo
run()	ProgMonoTomo	virtual
run()	ProgMonoTomo	virtual
runWithoutArgs	XmippProgram
sampling	ProgMonoTomo
setDefaultComment(const char *param, const char *comment)	XmippProgram
setProgramName(const char *name)	XmippProgram
setProgress(size_t value=0)	XmippProgram
show() const	XmippProgram	virtual
significance	ProgMonoTomo
smoothBorders(MultidimArray< float > &vol, MultidimArray< int > &pMask)	ProgMonoTomo
transformer_inv	ProgMonoTomo
trimBound	ProgMonoTomo
tryRun()	XmippProgram	virtual
usage(int verb=0) const	XmippProgram	virtual
usage(const String &param, int verb=2)	XmippProgram	virtual
verbose	XmippProgram
version() const	XmippProgram
Vfiltered	ProgMonoTomo
VresolutionFiltered	ProgMonoTomo
VRiesz	ProgMonoTomo
VRiesz	ProgMonoTomo
xdim	ProgMonoTomo
xdimFT	ProgMonoTomo
XmippProgram()	XmippProgram
XmippProgram(int argc, const char **argv)	XmippProgram
ydim	ProgMonoTomo
ydimFT	ProgMonoTomo
zdim	ProgMonoTomo
zdimFT	ProgMonoTomo
~XmippProgram()	XmippProgram	virtual