| addExampleLine(const char *example, bool verbatim=true) | XmippProgram | |
| addKeywords(const char *keywords) | XmippProgram | |
| addParamsLine(const String &line) | XmippProgram | |
| addParamsLine(const char *line) | XmippProgram | |
| addSeeAlsoLine(const char *seeAlso) | XmippProgram | |
| addUsageLine(const char *line, bool verbatim=false) | XmippProgram | |
| angular | ProgMLRefine3D | |
| argc | XmippProgram | protected |
| argv | XmippProgram | protected |
| calculate3DSSNR(MultidimArray< double > &spectral_signal) | ProgMLRefine3D | virtual |
| checkConvergence() | ProgMLRefine3D | virtual |
| checkParam(const char *param) | XmippProgram | |
| clearUsage() | XmippProgram | |
| copyVolumes() | ProgMLRefine3D | virtual |
| createEmptyFiles(int type) | ProgMLRefine3D | virtual |
| createReconsProgram(FileName &input, FileName &output) | ProgMLRefine3D | virtual |
| createSampling() | ProgMLRefine3D | |
| debug | XmippProgram | |
| defaultComments | XmippProgram | protected |
| defineCommons() | XmippProgram | protected |
| defineParams() | ProgMLRefine3D | virtual |
| dilate_solvent | ProgMLRefine3D | |
| do_deblob_solvent | ProgMLRefine3D | |
| do_perturb | ProgMLRefine3D | |
| do_prob_solvent | ProgMLRefine3D | |
| doRun | XmippProgram | |
| endProgress() | XmippProgram | |
| eps | ProgMLRefine3D | |
| errorCode | XmippProgram | protected |
| existsParam(const char *param) | XmippProgram | |
| fn_iter | ProgMLRefine3D | |
| fn_ref | ProgMLRefine3D | |
| fn_root | ProgMLRefine3D | |
| fn_sel | ProgMLRefine3D | |
| fn_solv | ProgMLRefine3D | |
| fn_sym | ProgMLRefine3D | |
| fn_symmask | ProgMLRefine3D | |
| fourier_mode | ProgMLRefine3D | |
| getCountParam(const char *param) | XmippProgram | |
| getDoubleParam(const char *param, int arg=0) | XmippProgram | |
| getDoubleParam(const char *param, const char *subparam, int arg=0) | XmippProgram | |
| getFloatParam(const char *param, int arg=0) | XmippProgram | |
| getFloatParam(const char *param, const char *subparam, int arg=0) | XmippProgram | |
| getIntParam(const char *param, int arg=0) | XmippProgram | |
| getIntParam(const char *param, const char *subparam, int arg=0) | XmippProgram | |
| getListParam(const char *param, StringVector &list) | XmippProgram | |
| getParam(const char *param, int arg=0) | XmippProgram | |
| getParam(const char *param, const char *subparam, int arg=0) | XmippProgram | |
| getParamDef(const char *param) const | XmippProgram | |
| initComments() | XmippProgram | virtual |
| initProgress(size_t total, size_t stepBin=60) | XmippProgram | |
| istart | ProgMLRefine3D | |
| iter | ProgMLRefine3D | |
| lowpass | ProgMLRefine3D | |
| makeNoiseImages() | ProgMLRefine3D | virtual |
| mdVol | ProgMLRefine3D | |
| ml2d | ProgMLRefine3D | |
| mysampling | ProgMLRefine3D | |
| name() const | XmippProgram | |
| Niter | ProgMLRefine3D | |
| nr_projections | ProgMLRefine3D | |
| Nvols | ProgMLRefine3D | |
| postProcessVolumes() | ProgMLRefine3D | virtual |
| processDefaultComment(const char *param, const char *left) | XmippProgram | |
| produceSideInfo() | ProgMLRefine3D | virtual |
| produceSideInfo2() | ProgMLRefine3D | virtual |
| progDef | XmippProgram | protected |
| ProgMLRefine3D(bool fourier=false) | ProgMLRefine3D | |
| projectVolumes(MetaData &mdProj) | ProgMLRefine3D | virtual |
| quit(int exit_code=0) const | XmippProgram | virtual |
| rank | ProgMLRefine3D | |
| read(int argc, const char **argv, bool reportErrors=true) | XmippProgram | virtual |
| read(int argc, char **argv, bool reportErrors=true) | XmippProgram | virtual |
| read(const String &argumentsLine) | XmippProgram | |
| readParams() | ProgMLRefine3D | virtual |
| recons_type | ProgMLRefine3D | |
| reconsMdFn | ProgMLRefine3D | |
| reconsOutFnBase | ProgMLRefine3D | |
| reconstructVolumes() | ProgMLRefine3D | virtual |
| run() | ProgMLRefine3D | virtual |
| runWithoutArgs | XmippProgram | |
| setDefaultComment(const char *param, const char *comment) | XmippProgram | |
| setProgramName(const char *name) | XmippProgram | |
| setProgress(size_t value=0) | XmippProgram | |
| show() | ProgMLRefine3D | |
| XmippProgram::show() const | XmippProgram | virtual |
| size | ProgMLRefine3D | |
| skip_reconstruction | ProgMLRefine3D | |
| sym_order | ProgMLRefine3D | |
| symmetry | ProgMLRefine3D | |
| threshold_solvent | ProgMLRefine3D | |
| tilt_range0 | ProgMLRefine3D | |
| tilt_rangeF | ProgMLRefine3D | |
| tryRun() | XmippProgram | virtual |
| updateVolumesMetadata() | ProgMLRefine3D | |
| usage(int verb=0) const | XmippProgram | virtual |
| usage(const String ¶m, int verb=2) | XmippProgram | virtual |
| verbose | XmippProgram | |
| version() const | XmippProgram | |
| wlsart_kappa | ProgMLRefine3D | |
| wlsart_lambda | ProgMLRefine3D | |
| wlsart_Niter | ProgMLRefine3D | |
| wlsart_no_start | ProgMLRefine3D | |
| XmippProgram() | XmippProgram | |
| XmippProgram(int argc, const char **argv) | XmippProgram | |
| ~ProgMLRefine3D() | ProgMLRefine3D | |
| ~XmippProgram() | XmippProgram | virtual |
1.8.13