Xmipp  v3.23.11-Nereus
MpiProgML2D Member List

This is the complete list of members for MpiProgML2D, including all inherited members.

A2ProgML2D
addExampleLine(const char *example, bool verbatim=true)XmippProgram
addKeywords(const char *keywords)XmippProgram
addParamsLine(const String &line)XmippProgram
addParamsLine(const char *line)XmippProgram
addPartialDocfileData(const MultidimArray< double > &data, size_t first, size_t last)ProgML2Dvirtual
addSeeAlsoLine(const char *seeAlso)XmippProgram
addUsageLine(const char *line, bool verbatim=false)XmippProgram
allowFastOptionML2DBaseProgram
allowIEMML2DBaseProgram
allowRestartML2DBaseProgram
allowThreadsML2DBaseProgram
allref_offsetsProgML2D
argcXmippProgramprotected
argvXmippProgramprotected
average_scaleML2DBaseProgram
awakeThreads(ThreadTask task, int start_refno, int load=1)ProgML2D
barrierProgML2D
barrier2ProgML2D
barrier3ProgML2D
bgmeanProgML2D
blocksML2DBaseProgram
C_fastML2DBaseProgram
calculatePdfInplane()ProgML2D
checkConvergence()ML2DBaseProgramvirtual
checkParam(const char *param)XmippProgram
clearUsage()XmippProgram
clineML2DBaseProgram
convML2DBaseProgram
correctScaleAverage()ProgML2D
created_nodeMpiML2DBase< MpiProgML2D >protected
createThreads()ProgML2Dvirtual
current_blockML2DBaseProgram
current_imageML2DBaseProgram
current_modelML2DBaseProgram
ddim2ML2DBaseProgram
debugXmippProgram
defaultCommentsXmippProgramprotected
defaultNiterML2DBaseProgram
defaultRootML2DBaseProgram
defaultStartingIterML2DBaseProgram
defineAdditionalParams(XmippProgram *prog, const char *sectionLine)ML2DBaseProgramvirtual
defineBasicParams(XmippProgram *prog)ML2DBaseProgramvirtual
defineCommons()XmippProgramprotected
defineHiddenParams(XmippProgram *prog)ML2DBaseProgramvirtual
defineParams()ProgML2Dvirtual
destroyThreads()ProgML2Dvirtual
dfML2DBaseProgram
df2ML2DBaseProgram
dfsigma2ML2DBaseProgram
dimML2DBaseProgram
dim2ML2DBaseProgram
dLLProgML2D
do_generate_refsML2DBaseProgram
do_mirrorML2DBaseProgram
do_ML3DML2DBaseProgram
do_normML2DBaseProgram
do_restartML2DBaseProgram
docfiledataML2DBaseProgram
doRunXmippProgram
doThreadESIUpdateRefno()ProgML2D
doThreadExpectationSingleImageRefno()ProgML2D
doThreadPreselectFastSignificantRefno()ProgML2D
doThreadReverseRotateReferenceRefno()ProgML2D
doThreadRotateReferenceRefno()ProgML2D
endIteration()MpiProgML2Dvirtual
endProgress()XmippProgram
epsML2DBaseProgram
errorCodeXmippProgramprotected
existsParam(const char *param)XmippProgram
expectation()MpiProgML2Dvirtual
expectationSingleImage(Matrix1D< double > &opt_offsets)ProgML2D
FML2DBaseProgram
factor_nrefML2DBaseProgram
fast_modeML2DBaseProgram
Fimg_flipProgML2D
fix_fractionsML2DBaseProgram
fix_sigma_noiseML2DBaseProgram
fix_sigma_offsetML2DBaseProgram
fn_controlML2DBaseProgram
fn_docML2DBaseProgram
fn_fracML2DBaseProgram
fn_imgML2DBaseProgram
fn_oextML2DBaseProgram
fn_refML2DBaseProgram
fn_rootML2DBaseProgram
fn_scratchML2DBaseProgram
fn_sigML2DBaseProgram
fracweightProgML2D
frefProgML2D
getBaseName(String suffix="", int number=-1)ProgML2D
getCountParam(const char *param)XmippProgram
getDoubleParam(const char *param, int arg=0)XmippProgram
getDoubleParam(const char *param, const char *subparam, int arg=0)XmippProgram
getFloatParam(const char *param, int arg=0)XmippProgram
getFloatParam(const char *param, const char *subparam, int arg=0)XmippProgram
getIntParam(const char *param, int arg=0)XmippProgram
getIntParam(const char *param, const char *subparam, int arg=0)XmippProgram
getListParam(const char *param, StringVector &list)XmippProgram
getParam(const char *param, int arg=0)XmippProgram
getParam(const char *param, const char *subparam, int arg=0)XmippProgram
getParamDef(const char *param) constXmippProgram
getThreadRefnoJob(int &refno)ProgML2D
hdimML2DBaseProgram
img_idML2DBaseProgram
imgs_bgmeanML2DBaseProgram
imgs_offsetsML2DBaseProgram
imgs_oldphiML2DBaseProgram
imgs_oldthetaML2DBaseProgram
imgs_optrefnoML2DBaseProgram
imgs_scaleML2DBaseProgram
imgs_trymindiffML2DBaseProgram
initComments()XmippProgramvirtual
initProgress(size_t total, size_t stepBin=60)XmippProgram
initSamplingStuff()ML2DBaseProgram
IoldML2DBaseProgram
iopt_flipProgML2D
iopt_psiProgML2D
ioptflip_refProgML2D
ioptxProgML2D
ioptx_refProgML2D
ioptyProgML2D
iopty_refProgML2D
istartML2DBaseProgram
iterML2DBaseProgram
iteration()ProgML2Dvirtual
limit_rotML2DBaseProgram
LLProgML2D
maskProgML2D
maximization()ProgML2Dvirtual
maximizeModel(ModelML2D &model)ProgML2D
maxweightProgML2D
maxweight2ProgML2D
MDimgML2DBaseProgram
MDlogML2DBaseProgram
MDrefML2DBaseProgram
MimgProgML2D
mindiffProgML2D
ML2DBaseProgram()ML2DBaseProgram
modelML2DBaseProgram
MpiML2DBase(MpiProgML2D *prm)MpiML2DBase< MpiProgML2D >
MpiML2DBase(MpiProgML2D *prm, MpiNode *node)MpiML2DBase< MpiProgML2D >
MpiML2DBase(const MpiML2DBase &)=deleteMpiML2DBase< MpiProgML2D >
MpiML2DBase(const MpiML2DBase &&)=deleteMpiML2DBase< MpiProgML2D >
MpiProgML2D()MpiProgML2D
MpiProgML2D(MpiNode *node)MpiProgML2D
Mr2ML2DBaseProgram
mrefProgML2D
MsignificantProgML2D
myFirstImgML2DBaseProgram
mygroupProgML2D
myLastImgML2DBaseProgram
mysumimgsProgML2D
name() constXmippProgram
NiterML2DBaseProgram
no_iemProgML2D
nodeMpiML2DBase< MpiProgML2D >protected
nr_flipML2DBaseProgram
nr_images_globalML2DBaseProgram
nr_images_localML2DBaseProgram
nr_nomirror_flipsML2DBaseProgram
nr_psiML2DBaseProgram
old_bgmeanProgML2D
omaskProgML2D
operator=(const MpiML2DBase &)=deleteMpiML2DBase< MpiProgML2D >
operator=(const MpiML2DBase &&)=deleteMpiML2DBase< MpiProgML2D >
opt_psiProgML2D
opt_refnoProgML2D
opt_scaleProgML2D
outRefsMdML2DBaseProgram
P_phiML2DBaseProgram
pdf_directionsProgML2D
pfs_countProgML2D
pfs_maxweightProgML2D
pfs_mindiffProgML2D
pfs_weightProgML2D
preselectFastSignificant()ProgML2D
preselectLimitedDirections(double &phi, double &theta)ProgML2D
printModel(const String &msg, const ModelML2D &model)MpiProgML2Dvirtual
processDefaultComment(const char *param, const char *left)XmippProgram
produceSideInfo()ProgML2Dvirtual
produceSideInfo2()MpiProgML2Dvirtual
progDefXmippProgramprotected
ProgML2D()ProgML2D
programMpiML2DBase< MpiProgML2D >protected
psi_maxML2DBaseProgram
psi_stepML2DBaseProgram
quit(int exit_code=0) constXmippProgramvirtual
randomizeImagesOrder()ML2DBaseProgramvirtual
read(int argc, const char **argv, bool reportErrors=true)XmippProgramvirtual
read(int argc, char **argv, bool reportErrors=true)XmippProgramvirtual
read(const String &argumentsLine)XmippProgram
readModel(ModelML2D &model, int block)ProgML2Dvirtual
readMpi(int argc, char **argv)MpiML2DBase< MpiProgML2D >inline
readParams()ProgML2Dvirtual
referenceExclusiveML2DBaseProgram
refno_countProgML2D
refno_indexProgML2D
refno_loadProgML2D
refno_load_paramProgML2D
refs_per_classML2DBaseProgram
refwProgML2D
refw2ProgML2D
refw_mirrorProgML2D
refwsc2ProgML2D
reverseRotateReference()ProgML2D
rotateReference()ProgML2D
run()ML2DBaseProgramvirtual
runWithoutArgsXmippProgram
save_mem1ML2DBaseProgram
save_mem2ML2DBaseProgram
save_mem3ML2DBaseProgram
search_rotML2DBaseProgram
seedML2DBaseProgram
sendDocfile(const MultidimArray< double > &data)MpiML2DBase< MpiProgML2D >
setDefaultComment(const char *param, const char *comment)XmippProgram
setNumberOfLocalImages()MpiProgML2Dvirtual
setProgramName(const char *name)XmippProgram
setProgress(size_t value=0)XmippProgram
show()ProgML2Dvirtual
ML2DBaseProgram::show() constXmippProgramvirtual
sigdimProgML2D
spectral_signalML2DBaseProgram
sum_refwProgML2D
sum_refw2ProgML2D
sumfracweightProgML2D
sumwProgML2D
sumw2ProgML2D
sumw_allrefsProgML2D
sumw_mirrorProgML2D
sumw_refpsiProgML2D
sumwscProgML2D
sumwsc2ProgML2D
th_idsProgML2D
threadsML2DBaseProgram
threads_dProgML2D
threadTaskProgML2D
trymindiffProgML2D
trymindiff_factorML2DBaseProgram
tryRun()XmippProgramvirtual
usage(int verb=0) constMpiProgML2Dvirtual
ProgML2D::usage(const String &param, int verb=2)XmippProgramvirtual
verboseXmippProgram
version() constXmippProgram
VtransML2DBaseProgram
writeOutputFiles(const ModelML2D &model, OutputType outputType=OUT_FINAL)MpiProgML2Dvirtual
wsum_corrProgML2D
wsum_MrefProgML2D
wsum_offsetProgML2D
wsum_scProgML2D
wsum_sc2ProgML2D
wsum_sigma_noiseProgML2D
wsum_sigma_offsetProgML2D
wsumimgsProgML2D
Xi2ProgML2D
XmippProgram()XmippProgram
XmippProgram(int argc, const char **argv)XmippProgram
zero_offsetsML2DBaseProgram
~MpiML2DBase()MpiML2DBase< MpiProgML2D >inline
~XmippProgram()XmippProgramvirtual
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