ML2DBaseProgram Member List

This is the complete list of members for ML2DBaseProgram, including all inherited members.

addExampleLine(const char *example, bool verbatim=true)	XmippProgram
addKeywords(const char *keywords)	XmippProgram
addParamsLine(const String &line)	XmippProgram
addParamsLine(const char *line)	XmippProgram
addPartialDocfileData(const MultidimArray< double > &data, size_t first, size_t last)=0	ML2DBaseProgram	pure virtual
addSeeAlsoLine(const char *seeAlso)	XmippProgram
addUsageLine(const char *line, bool verbatim=false)	XmippProgram
allowFastOption	ML2DBaseProgram
allowIEM	ML2DBaseProgram
allowRestart	ML2DBaseProgram
allowThreads	ML2DBaseProgram
argc	XmippProgram	protected
argv	XmippProgram	protected
average_scale	ML2DBaseProgram
blocks	ML2DBaseProgram
C_fast	ML2DBaseProgram
checkConvergence()	ML2DBaseProgram	virtual
checkParam(const char *param)	XmippProgram
clearUsage()	XmippProgram
cline	ML2DBaseProgram
conv	ML2DBaseProgram
createThreads()	ML2DBaseProgram	inlinevirtual
current_block	ML2DBaseProgram
current_image	ML2DBaseProgram
current_model	ML2DBaseProgram
ddim2	ML2DBaseProgram
debug	XmippProgram
defaultComments	XmippProgram	protected
defaultNiter	ML2DBaseProgram
defaultRoot	ML2DBaseProgram
defaultStartingIter	ML2DBaseProgram
defineAdditionalParams(XmippProgram *prog, const char *sectionLine)	ML2DBaseProgram	virtual
defineBasicParams(XmippProgram *prog)	ML2DBaseProgram	virtual
defineCommons()	XmippProgram	protected
defineHiddenParams(XmippProgram *prog)	ML2DBaseProgram	virtual
defineParams()	XmippProgram	virtual
destroyThreads()	ML2DBaseProgram	inlinevirtual
df	ML2DBaseProgram
df2	ML2DBaseProgram
dfsigma2	ML2DBaseProgram
dim	ML2DBaseProgram
dim2	ML2DBaseProgram
do_generate_refs	ML2DBaseProgram
do_mirror	ML2DBaseProgram
do_ML3D	ML2DBaseProgram
do_norm	ML2DBaseProgram
do_restart	ML2DBaseProgram
docfiledata	ML2DBaseProgram
doRun	XmippProgram
endIteration()	ML2DBaseProgram	virtual
endProgress()	XmippProgram
eps	ML2DBaseProgram
errorCode	XmippProgram	protected
existsParam(const char *param)	XmippProgram
expectation()=0	ML2DBaseProgram	pure virtual
F	ML2DBaseProgram
factor_nref	ML2DBaseProgram
fast_mode	ML2DBaseProgram
fix_fractions	ML2DBaseProgram
fix_sigma_noise	ML2DBaseProgram
fix_sigma_offset	ML2DBaseProgram
fn_control	ML2DBaseProgram
fn_doc	ML2DBaseProgram
fn_frac	ML2DBaseProgram
fn_img	ML2DBaseProgram
fn_oext	ML2DBaseProgram
fn_ref	ML2DBaseProgram
fn_root	ML2DBaseProgram
fn_scratch	ML2DBaseProgram
fn_sig	ML2DBaseProgram
getCountParam(const char *param)	XmippProgram
getDoubleParam(const char *param, int arg=0)	XmippProgram
getDoubleParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getFloatParam(const char *param, int arg=0)	XmippProgram
getFloatParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getIntParam(const char *param, int arg=0)	XmippProgram
getIntParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getListParam(const char *param, StringVector &list)	XmippProgram
getParam(const char *param, int arg=0)	XmippProgram
getParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getParamDef(const char *param) const	XmippProgram
hdim	ML2DBaseProgram
img_id	ML2DBaseProgram
imgs_bgmean	ML2DBaseProgram
imgs_offsets	ML2DBaseProgram
imgs_oldphi	ML2DBaseProgram
imgs_oldtheta	ML2DBaseProgram
imgs_optrefno	ML2DBaseProgram
imgs_scale	ML2DBaseProgram
imgs_trymindiff	ML2DBaseProgram
initComments()	XmippProgram	virtual
initProgress(size_t total, size_t stepBin=60)	XmippProgram
initSamplingStuff()	ML2DBaseProgram
Iold	ML2DBaseProgram
istart	ML2DBaseProgram
iter	ML2DBaseProgram
iteration()=0	ML2DBaseProgram	pure virtual
limit_rot	ML2DBaseProgram
maximization()=0	ML2DBaseProgram	pure virtual
MDimg	ML2DBaseProgram
MDlog	ML2DBaseProgram
MDref	ML2DBaseProgram
ML2DBaseProgram()	ML2DBaseProgram
model	ML2DBaseProgram
Mr2	ML2DBaseProgram
myFirstImg	ML2DBaseProgram
myLastImg	ML2DBaseProgram
name() const	XmippProgram
Niter	ML2DBaseProgram
nr_flip	ML2DBaseProgram
nr_images_global	ML2DBaseProgram
nr_images_local	ML2DBaseProgram
nr_nomirror_flips	ML2DBaseProgram
nr_psi	ML2DBaseProgram
outRefsMd	ML2DBaseProgram
P_phi	ML2DBaseProgram
processDefaultComment(const char *param, const char *left)	XmippProgram
produceSideInfo()=0	ML2DBaseProgram	pure virtual
produceSideInfo2()=0	ML2DBaseProgram	pure virtual
progDef	XmippProgram	protected
psi_max	ML2DBaseProgram
psi_step	ML2DBaseProgram
quit(int exit_code=0) const	XmippProgram	virtual
randomizeImagesOrder()	ML2DBaseProgram	virtual
read(int argc, const char **argv, bool reportErrors=true)	XmippProgram	virtual
read(int argc, char **argv, bool reportErrors=true)	XmippProgram	virtual
read(const String &argumentsLine)	XmippProgram
readParams()	XmippProgram	virtual
referenceExclusive	ML2DBaseProgram
refs_per_class	ML2DBaseProgram
run()	ML2DBaseProgram	virtual
runWithoutArgs	XmippProgram
save_mem1	ML2DBaseProgram
save_mem2	ML2DBaseProgram
save_mem3	ML2DBaseProgram
search_rot	ML2DBaseProgram
seed	ML2DBaseProgram
setDefaultComment(const char *param, const char *comment)	XmippProgram
setNumberOfLocalImages()	ML2DBaseProgram	virtual
setProgramName(const char *name)	XmippProgram
setProgress(size_t value=0)	XmippProgram
show() const	XmippProgram	virtual
spectral_signal	ML2DBaseProgram
threads	ML2DBaseProgram
trymindiff_factor	ML2DBaseProgram
tryRun()	XmippProgram	virtual
usage(int verb=0) const	XmippProgram	virtual
usage(const String &param, int verb=2)	XmippProgram	virtual
verbose	XmippProgram
version() const	XmippProgram
Vtrans	ML2DBaseProgram
writeOutputFiles(const ModelML2D &model, OutputType outputType=OUT_FINAL)=0	ML2DBaseProgram	pure virtual
XmippProgram()	XmippProgram
XmippProgram(int argc, const char **argv)	XmippProgram
zero_offsets	ML2DBaseProgram
~XmippProgram()	XmippProgram	virtual