AProgMovieAlignmentCorrelation< T > Member List

This is the complete list of members for AProgMovieAlignmentCorrelation< T >, including all inherited members.

addExampleLine(const char *example, bool verbatim=true)	XmippProgram
addKeywords(const char *keywords)	XmippProgram
addParamsLine(const String &line)	XmippProgram
addParamsLine(const char *line)	XmippProgram
addSeeAlsoLine(const char *seeAlso)	XmippProgram
addUsageLine(const char *line, bool verbatim=false)	XmippProgram
applyBinning() const	AProgMovieAlignmentCorrelation< T >	inlineprotected
applyShiftsComputeAverage(const MetaData &movie, const Image< T > &dark, const Image< T > &igain, Image< T > &initialMic, size_t &Ninitial, Image< T > &averageMicrograph, size_t &N, const AlignmentResult< T > &globAlignment)=0	AProgMovieAlignmentCorrelation< T >	protectedpure virtual
applyShiftsComputeAverage(const MetaData &movie, const Image< T > &dark, const Image< T > &igain, Image< T > &initialMic, size_t &Ninitial, Image< T > &averageMicrograph, size_t &N, const LocalAlignmentResult< T > &alignment)=0	AProgMovieAlignmentCorrelation< T >	protectedpure virtual
argc	XmippProgram	protected
argv	XmippProgram	protected
checkParam(const char *param)	XmippProgram
clearUsage()	XmippProgram
computeAlignment(Matrix1D< T > &bX, Matrix1D< T > &bY, Matrix2D< T > &A, const core::optional< size_t > &refFrame, size_t N, int verbose)	AProgMovieAlignmentCorrelation< T >	protected
computeGlobalAlignment(const MetaData &movie, const Image< T > &dark, const Image< T > &igain)=0	AProgMovieAlignmentCorrelation< T >	protectedpure virtual
computeLocalAlignment(const MetaData &movie, const Image< T > &dark, const Image< T > &igain, const AlignmentResult< T > &globAlignment)=0	AProgMovieAlignmentCorrelation< T >	protectedpure virtual
computeTotalShift(int iref, int j, const Matrix1D< T > &shiftX, const Matrix1D< T > &shiftY, T &totalShiftX, T &totalShiftY)	AProgMovieAlignmentCorrelation< T >	protected
createLPF(T Ts, const Dimensions &dims)	AProgMovieAlignmentCorrelation< T >	protected
debug	XmippProgram
defaultComments	XmippProgram	protected
defineCommons()	XmippProgram	protected
defineParams()	AProgMovieAlignmentCorrelation< T >	virtual
doRun	XmippProgram
endProgress()	XmippProgram
errorCode	XmippProgram	protected
existsParam(const char *param)	XmippProgram
findReferenceImage(size_t N, const Matrix1D< T > &shiftX, const Matrix1D< T > &shiftY)	AProgMovieAlignmentCorrelation< T >	protected
fnAligned	AProgMovieAlignmentCorrelation< T >	protected
fnAvg	AProgMovieAlignmentCorrelation< T >	protected
fnInitialAvg	AProgMovieAlignmentCorrelation< T >	protected
getBinning() const	AProgMovieAlignmentCorrelation< T >	inlineprotected
getCountParam(const char *param)	XmippProgram
getDoubleParam(const char *param, int arg=0)	XmippProgram
getDoubleParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getFloatParam(const char *param, int arg=0)	XmippProgram
getFloatParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getIntParam(const char *param, int arg=0)	XmippProgram
getIntParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getListParam(const char *param, StringVector &list)	XmippProgram
getMovieSize()	AProgMovieAlignmentCorrelation< T >	protected
getMovieSizeRaw()	AProgMovieAlignmentCorrelation< T >	protected
getParam(const char *param, int arg=0)	XmippProgram
getParam(const char *param, const char *subparam, int arg=0)	XmippProgram
getParamDef(const char *param) const	XmippProgram
getPixelResolution(float scaleFactor) const	AProgMovieAlignmentCorrelation< T >	protected
getRequestedPatchSize() const	AProgMovieAlignmentCorrelation< T >	inlineprotected
getScaleFactor() const	AProgMovieAlignmentCorrelation< T >	protected
initComments()	XmippProgram	virtual
initProgress(size_t total, size_t stepBin=60)	XmippProgram
loadFrame(const MetaData &movie, const Image< T > &dark, const Image< T > &igain, size_t objId, Image< T > &out) const	AProgMovieAlignmentCorrelation< T >	protected
localAlignmentControlPoints	AProgMovieAlignmentCorrelation< T >	protected
localAlignPatches	AProgMovieAlignmentCorrelation< T >	protected
maxShift	AProgMovieAlignmentCorrelation< T >	protected
name() const	XmippProgram
nfirst	AProgMovieAlignmentCorrelation< T >	protected
nfirstSum	AProgMovieAlignmentCorrelation< T >	protected
nlast	AProgMovieAlignmentCorrelation< T >	protected
nlastSum	AProgMovieAlignmentCorrelation< T >	protected
processDefaultComment(const char *param, const char *left)	XmippProgram
progDef	XmippProgram	protected
quit(int exit_code=0) const	XmippProgram	virtual
read(int argc, const char **argv, bool reportErrors=true)	XmippProgram	virtual
read(int argc, char **argv, bool reportErrors=true)	XmippProgram	virtual
read(const String &argumentsLine)	XmippProgram
readParams()	AProgMovieAlignmentCorrelation< T >	virtual
releaseAll()=0	AProgMovieAlignmentCorrelation< T >	protectedpure virtual
run()	AProgMovieAlignmentCorrelation< T >	virtual
runWithoutArgs	XmippProgram
setDefaultComment(const char *param, const char *comment)	XmippProgram
setProgramName(const char *name)	XmippProgram
setProgress(size_t value=0)	XmippProgram
show()	AProgMovieAlignmentCorrelation< T >	virtual
XmippProgram::show() const	XmippProgram	virtual
solverIterations	AProgMovieAlignmentCorrelation< T >	protectedstatic
storeResults(const LocalAlignmentResult< T > &alignment)	AProgMovieAlignmentCorrelation< T >	protected
tryRun()	XmippProgram	virtual
usage(int verb=0) const	XmippProgram	virtual
usage(const String &param, int verb=2)	XmippProgram	virtual
verbose	XmippProgram
version() const	XmippProgram
XmippProgram()	XmippProgram
XmippProgram(int argc, const char **argv)	XmippProgram
~XmippProgram()	XmippProgram	virtual